RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 SLC25A46Q96AG3 418 aa11.56□□□□□ -0.56
SS18-212ENST00000579061 CLCC1Q96S66 551 aa11.56□□□□□ -0.56
SS18-212ENST00000579061 AURKAIP1Q9NWT8 199 aaPredicted RBP11.56□□□□□ -0.56
SS18-212ENST00000579061 RBMX2Q9Y388 322 aaKnown RBP11.56□□□□□ -0.56
SS18-212ENST00000579061 LINC00473A8K010 186 aa11.55□□□□□ -0.56
SS18-212ENST00000579061 I3L521 148 aa11.55□□□□□ -0.56
SS18-212ENST00000579061 SOX15O60248 233 aa11.55□□□□□ -0.56
SS18-212ENST00000579061 ARPC4P59998 168 aa11.55□□□□□ -0.56
SS18-212ENST00000579061 FXYD3Q14802 87 aa11.55□□□□□ -0.56
SS18-212ENST00000579061 MSMO1Q15800 293 aa11.55□□□□□ -0.56
SS18-212ENST00000579061 DEFB136Q30KP8 78 aa11.55□□□□□ -0.56
SS18-212ENST00000579061 ACTBL2Q562R1 376 aa11.55□□□□□ -0.56
SS18-212ENST00000579061 GVQW1Q8N7I0 195 aa11.55□□□□□ -0.56
SS18-212ENST00000579061 TEX45Q8NA69 505 aa11.55□□□□□ -0.56
SS18-212ENST00000579061 ARPC1AQ92747 370 aa11.55□□□□□ -0.56
SS18-212ENST00000579061 DPF1Q92782 380 aa11.55□□□□□ -0.56
SS18-212ENST00000579061 TMEM68Q96MH6 324 aa11.55□□□□□ -0.56
SS18-212ENST00000579061 CMTM3Q96MX0 182 aa11.55□□□□□ -0.56
SS18-212ENST00000579061 DUX3Q96PT4 197 aa11.55□□□□□ -0.56
SS18-212ENST00000579061 TPSG1Q9NRR2 321 aa11.55□□□□□ -0.56
SS18-212ENST00000579061 PRELID3BQ9Y3B1 194 aa11.55□□□□□ -0.56
SS18-212ENST00000579061 IGKV1D-13A0A0B4J2D9 117 aa11.54□□□□□ -0.56
SS18-212ENST00000579061 SRRM4A7MD48 611 aaKnown RBP11.54□□□□□ -0.56
SS18-212ENST00000579061 ARPC1BO15143 372 aaKnown RBP11.54□□□□□ -0.56
SS18-212ENST00000579061 CRYZL1O95825 349 aa11.54□□□□□ -0.56
SS18-212ENST00000579061 PRB2P02812 416 aaPredicted RBP11.54□□□□□ -0.56
SS18-212ENST00000579061 IGKV1-13P0DP09 117 aa11.54□□□□□ -0.56
SS18-212ENST00000579061 CD40LGP29965 261 aa11.54□□□□□ -0.56
SS18-212ENST00000579061 UBE2KP61086 200 aa11.54□□□□□ -0.56
SS18-212ENST00000579061 VMA21Q3ZAQ7 101 aa11.54□□□□□ -0.56
SS18-212ENST00000579061 OVCH2Q7RTZ1 564 aa11.54□□□□□ -0.56
SS18-212ENST00000579061 SAMD12Q8N8I0 201 aa11.54□□□□□ -0.56
SS18-212ENST00000579061 LFNGQ8NES3 379 aa11.54□□□□□ -0.56
SS18-212ENST00000579061 OR11H1Q8NG94 326 aa11.54□□□□□ -0.56
SS18-212ENST00000579061 HSD17B10Q99714 261 aaKnown RBP11.54□□□□□ -0.56
SS18-212ENST00000579061 FAM103A1Q9BTL3 118 aaKnown RBP11.54□□□□□ -0.56
SS18-212ENST00000579061 SLA2Q9H6Q3 261 aa11.54□□□□□ -0.56
SS18-212ENST00000579061 GNB4Q9HAV0 340 aa11.54□□□□□ -0.56
SS18-212ENST00000579061 ZMAT5Q9UDW3 170 aaKnown RBP11.54□□□□□ -0.56
SS18-212ENST00000579061 MRPS7Q9Y2R9 242 aaKnown RBP11.54□□□□□ -0.56
SS18-212ENST00000579061 A3GALT2U3KPV4 340 aa11.54□□□□□ -0.56
SS18-212ENST00000579061 H3BUA1 57 aa11.53□□□□□ -0.56
SS18-212ENST00000579061 J3QRK9 145 aa11.53□□□□□ -0.56
SS18-212ENST00000579061 CNIH1O95406 144 aa11.53□□□□□ -0.56
SS18-212ENST00000579061 IGLV2-14P01704 120 aa11.53□□□□□ -0.56
SS18-212ENST00000579061 SMIM18P0DKX4 95 aa11.53□□□□□ -0.56
SS18-212ENST00000579061 NCS1P62166 190 aa11.53□□□□□ -0.56
SS18-212ENST00000579061 SSBP2P81877 361 aaPredicted RBP11.53□□□□□ -0.56
SS18-212ENST00000579061 TMEM69Q5SWH9 247 aa11.53□□□□□ -0.56
SS18-212ENST00000579061 ZNF66Q6ZN08 573 aa11.53□□□□□ -0.56
SS18-212ENST00000579061 KCTD9Q7L273 389 aa11.53□□□□□ -0.56
SS18-212ENST00000579061 ANKRD13BQ86YJ7 626 aa11.53□□□□□ -0.56
SS18-212ENST00000579061 OR5AP2Q8NGF4 316 aa11.53□□□□□ -0.56
SS18-212ENST00000579061 MRAPQ8TCY5 172 aa11.53□□□□□ -0.56
SS18-212ENST00000579061 ACOT12Q8WYK0 555 aa11.53□□□□□ -0.56
SS18-212ENST00000579061 BRI3O95415 125 aa11.52□□□□□ -0.57
SS18-212ENST00000579061 OR8U8P0C7N1 319 aa11.52□□□□□ -0.57
SS18-212ENST00000579061 PTHLHP12272 177 aa11.52□□□□□ -0.57
SS18-212ENST00000579061 FCGR2CP31995 323 aa11.52□□□□□ -0.57
SS18-212ENST00000579061 RAB25P57735 213 aa11.52□□□□□ -0.57
SS18-212ENST00000579061 TAS2R20P59543 309 aa11.52□□□□□ -0.57
SS18-212ENST00000579061 VBP1P61758 197 aa11.52□□□□□ -0.57
SS18-212ENST00000579061 ZNF616Q08AN1 781 aa11.52□□□□□ -0.57
SS18-212ENST00000579061 PJVKQ0ZLH3 352 aa11.52□□□□□ -0.57
SS18-212ENST00000579061 EIF4EBP1Q13541 118 aaPredicted RBP11.52□□□□□ -0.57
SS18-212ENST00000579061 ZBTB34Q8NCN2 500 aa11.52□□□□□ -0.57
SS18-212ENST00000579061 OR1N2Q8NGR9 330 aa11.52□□□□□ -0.57
SS18-212ENST00000579061 GRPEL2Q8TAA5 225 aa11.52□□□□□ -0.57
SS18-212ENST00000579061 GIMAP1Q8WWP7 306 aa11.52□□□□□ -0.57
SS18-212ENST00000579061 SNAPC3Q92966 411 aa11.52□□□□□ -0.57
SS18-212ENST00000579061 ANAPC10Q9UM13 185 aa11.52□□□□□ -0.57
SS18-212ENST00000579061 CREBL2O60519 120 aaPredicted RBP11.51□□□□□ -0.57
SS18-212ENST00000579061 FCGR3BO75015 233 aa11.51□□□□□ -0.57
SS18-212ENST00000579061 GABARAPO95166 117 aa11.51□□□□□ -0.57
SS18-212ENST00000579061 PPYP01298 95 aa11.51□□□□□ -0.57
SS18-212ENST00000579061 APOA1P02647 267 aa11.51□□□□□ -0.57
SS18-212ENST00000579061 NAT1P18440 290 aa11.51□□□□□ -0.57
SS18-212ENST00000579061 AADACP22760 399 aa11.51□□□□□ -0.57
SS18-212ENST00000579061 KRTAP10-11P60412 298 aa11.51□□□□□ -0.57
SS18-212ENST00000579061 GNB1P62873 340 aa11.51□□□□□ -0.57
SS18-212ENST00000579061 RPL30P62888 115 aaKnown RBP11.51□□□□□ -0.57
SS18-212ENST00000579061 CDK10Q15131 360 aa11.51□□□□□ -0.57
SS18-212ENST00000579061 MRGPRG-AS1Q2M3A8 158 aa11.51□□□□□ -0.57
SS18-212ENST00000579061 C9orf66Q5T8R8 295 aa11.51□□□□□ -0.57
SS18-212ENST00000579061 MFSD4AQ8N468 514 aa11.51□□□□□ -0.57
SS18-212ENST00000579061 OR4S2Q8NH73 311 aa11.51□□□□□ -0.57
SS18-212ENST00000579061 IFT46Q9NQC8 304 aa11.51□□□□□ -0.57
SS18-212ENST00000579061 LGALS1P09382 135 aaKnown RBP11.5□□□□□ -0.57
SS18-212ENST00000579061 HOXD3P31249 432 aaPredicted RBP11.5□□□□□ -0.57
SS18-212ENST00000579061 PRSS3P35030 304 aa11.5□□□□□ -0.57
SS18-212ENST00000579061 KIR2DS2P43631 304 aa11.5□□□□□ -0.57
SS18-212ENST00000579061 RORCP51449 518 aa11.5□□□□□ -0.57
SS18-212ENST00000579061 CTF1Q16619 201 aa11.5□□□□□ -0.57
SS18-212ENST00000579061 PRSS8Q16651 343 aa11.5□□□□□ -0.57
SS18-212ENST00000579061 ASPHD1Q5U4P2 390 aa11.5□□□□□ -0.57
SS18-212ENST00000579061 POC5Q8NA72 575 aa11.5□□□□□ -0.57
SS18-212ENST00000579061 SECTM1Q8WVN6 248 aa11.5□□□□□ -0.57
SS18-212ENST00000579061 TCTEX1D2Q8WW35 142 aa11.5□□□□□ -0.57
SS18-212ENST00000579061 BORCS5Q969J3 196 aa11.5□□□□□ -0.57
SS18-212ENST00000579061 RHOVQ96L33 236 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms