RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 WFDC11Q8NEX6 87 aa13.89□□□□□ -0.19
SREBF1-218ENST00000578469 ST8SIA2Q92186 375 aa13.89□□□□□ -0.19
SREBF1-218ENST00000578469 PATZ1Q9HBE1 687 aaKnown RBP13.89□□□□□ -0.19
SREBF1-218ENST00000578469 COA4Q9NYJ1 87 aa13.89□□□□□ -0.19
SREBF1-218ENST00000578469 CACNG5Q9UF02 275 aa13.89□□□□□ -0.19
SREBF1-218ENST00000578469 SAA2-SAA4A0A096LPE2 208 aa13.88□□□□□ -0.19
SREBF1-218ENST00000578469 hCG_1809904A0A1W2PP81 198 aa13.88□□□□□ -0.19
SREBF1-218ENST00000578469 A0A1W2PPE2 198 aa13.88□□□□□ -0.19
SREBF1-218ENST00000578469 A0A1W2PR64 198 aa13.88□□□□□ -0.19
SREBF1-218ENST00000578469 A0A1W2PRV1 198 aa13.88□□□□□ -0.19
SREBF1-218ENST00000578469 MSGN1A6NI15 193 aa13.88□□□□□ -0.19
SREBF1-218ENST00000578469 PROP1O75360 226 aa13.88□□□□□ -0.19
SREBF1-218ENST00000578469 SPDEFO95238 335 aa13.88□□□□□ -0.19
SREBF1-218ENST00000578469 CFDP00746 253 aaPredicted RBP13.88□□□□□ -0.19
SREBF1-218ENST00000578469 KRASP01116 189 aa13.88□□□□□ -0.19
SREBF1-218ENST00000578469 SAA2P0DJI9 122 aaPredicted RBP13.88□□□□□ -0.19
SREBF1-218ENST00000578469 DLX6P56179 175 aa13.88□□□□□ -0.19
SREBF1-218ENST00000578469 POLR2GP62487 172 aaKnown RBP eCLIP13.88□□□□□ -0.19
SREBF1-218ENST00000578469 Q71RC1 249 aaPredicted RBP13.88□□□□□ -0.19
SREBF1-218ENST00000578469 H2BFWTQ7Z2G1 175 aa13.88□□□□□ -0.19
SREBF1-218ENST00000578469 OR8H3Q8N146 312 aa13.88□□□□□ -0.19
SREBF1-218ENST00000578469 DMBX1Q8NFW5 382 aa13.88□□□□□ -0.19
SREBF1-218ENST00000578469 SLC25A31Q9H0C2 315 aa13.88□□□□□ -0.19
SREBF1-218ENST00000578469 SESN1Q9Y6P5 492 aa13.88□□□□□ -0.19
SREBF1-218ENST00000578469 A0A087X0M5 115 aa13.87□□□□□ -0.19
SREBF1-218ENST00000578469 A0A1B0GX30 115 aa13.87□□□□□ -0.19
SREBF1-218ENST00000578469 FAM90A26D6RGX4 464 aa13.87□□□□□ -0.19
SREBF1-218ENST00000578469 TOR1AO14656 332 aa13.87□□□□□ -0.19
SREBF1-218ENST00000578469 SSSCA1O60232 199 aa13.87□□□□□ -0.19
SREBF1-218ENST00000578469 RBP4P02753 201 aa13.87□□□□□ -0.19
SREBF1-218ENST00000578469 IGHV1-8P0DP01 117 aa13.87□□□□□ -0.19
SREBF1-218ENST00000578469 G6PCP35575 357 aa13.87□□□□□ -0.19
SREBF1-218ENST00000578469 ERVK-16P61578 105 aa13.87□□□□□ -0.19
SREBF1-218ENST00000578469 GNB2P62879 340 aa13.87□□□□□ -0.19
SREBF1-218ENST00000578469 ODF3L1Q8IXM7 274 aa13.87□□□□□ -0.19
SREBF1-218ENST00000578469 LINC00311Q8N616 119 aa13.87□□□□□ -0.19
SREBF1-218ENST00000578469 OR4S2Q8NH73 311 aa13.87□□□□□ -0.19
SREBF1-218ENST00000578469 OR9G1Q8NH87 305 aa13.87□□□□□ -0.19
SREBF1-218ENST00000578469 C8orf46Q8TAG6 207 aa13.87□□□□□ -0.19
SREBF1-218ENST00000578469 SCARB1Q8WTV0 552 aa13.87□□□□□ -0.19
SREBF1-218ENST00000578469 R3HDM4Q96D70 268 aa13.87□□□□□ -0.19
SREBF1-218ENST00000578469 RAB40CQ96S21 281 aa13.87□□□□□ -0.19
SREBF1-218ENST00000578469 MAGT1Q9H0U3 335 aa13.87□□□□□ -0.19
SREBF1-218ENST00000578469 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.87□□□□□ -0.19
SREBF1-218ENST00000578469 PPIAL4CA0A0B4J2A2 164 aa13.86□□□□□ -0.19
SREBF1-218ENST00000578469 ATP6V1G1O75348 118 aa13.86□□□□□ -0.19
SREBF1-218ENST00000578469 MED6O75586 246 aa13.86□□□□□ -0.19
SREBF1-218ENST00000578469 PPIAL4GP0DN37 164 aa13.86□□□□□ -0.19
SREBF1-218ENST00000578469 TPT1P13693 172 aaKnown RBP13.86□□□□□ -0.19
SREBF1-218ENST00000578469 IL3RAP26951 378 aa13.86□□□□□ -0.19
SREBF1-218ENST00000578469 ARHGDIBP52566 201 aa13.86□□□□□ -0.19
SREBF1-218ENST00000578469 BRWD1-AS2P59051 145 aa13.86□□□□□ -0.19
SREBF1-218ENST00000578469 RPL23AP62750 156 aaKnown RBP13.86□□□□□ -0.19
SREBF1-218ENST00000578469 UTF1Q5T230 341 aa13.86□□□□□ -0.19
SREBF1-218ENST00000578469 Q6ZRM9 215 aa13.86□□□□□ -0.19
SREBF1-218ENST00000578469 OR2C3Q8N628 320 aa13.86□□□□□ -0.19
SREBF1-218ENST00000578469 OR10X1Q8NGY0 326 aa13.86□□□□□ -0.19
SREBF1-218ENST00000578469 ZNF596Q8TC21 504 aa13.86□□□□□ -0.19
SREBF1-218ENST00000578469 PHYHIPLQ96FC7 376 aa13.86□□□□□ -0.19
SREBF1-218ENST00000578469 SMR3AQ99954 134 aa13.86□□□□□ -0.19
SREBF1-218ENST00000578469 ZNF251Q9BRH9 671 aa13.86□□□□□ -0.19
SREBF1-218ENST00000578469 TMEM133Q9H2Q1 129 aa13.86□□□□□ -0.19
SREBF1-218ENST00000578469 BEX4Q9NWD9 120 aaPredicted RBP13.86□□□□□ -0.19
SREBF1-218ENST00000578469 FAM90A9PA6NNJ1 464 aa13.85□□□□□ -0.19
SREBF1-218ENST00000578469 J3QR06 171 aa13.85□□□□□ -0.19
SREBF1-218ENST00000578469 OVOL3O00110 214 aa13.85□□□□□ -0.19
SREBF1-218ENST00000578469 CHST1O43916 411 aa13.85□□□□□ -0.19
SREBF1-218ENST00000578469 LIPFP07098 398 aa13.85□□□□□ -0.19
SREBF1-218ENST00000578469 LINC00205P59089 165 aa13.85□□□□□ -0.19
SREBF1-218ENST00000578469 ERVFRD-1P60508 538 aa13.85□□□□□ -0.19
SREBF1-218ENST00000578469 TAGLNQ01995 201 aaKnown RBP13.85□□□□□ -0.19
SREBF1-218ENST00000578469 IZUMO4Q1ZYL8 232 aa13.85□□□□□ -0.19
SREBF1-218ENST00000578469 CLLU1Q5K131 121 aa13.85□□□□□ -0.19
SREBF1-218ENST00000578469 FAM71F2Q6NXP2 309 aa13.85□□□□□ -0.19
SREBF1-218ENST00000578469 ZNF833PQ6ZTB9 187 aa13.85□□□□□ -0.19
SREBF1-218ENST00000578469 STOML3Q8TAV4 291 aa13.85□□□□□ -0.19
SREBF1-218ENST00000578469 DDB2Q92466 427 aa13.85□□□□□ -0.19
SREBF1-218ENST00000578469 TNFRSF14Q92956 283 aa13.85□□□□□ -0.19
SREBF1-218ENST00000578469 TMEM186Q96B77 213 aa13.85□□□□□ -0.19
SREBF1-218ENST00000578469 SSBP3Q9BWW4 388 aaPredicted RBP13.85□□□□□ -0.19
SREBF1-218ENST00000578469 GSX2Q9BZM3 304 aa13.85□□□□□ -0.19
SREBF1-218ENST00000578469 C11orf1Q9H5F2 150 aa13.85□□□□□ -0.19
SREBF1-218ENST00000578469 MARCH11A6NNE9 402 aa13.84□□□□□ -0.19
SREBF1-218ENST00000578469 SYNGR2O43760 224 aa13.84□□□□□ -0.19
SREBF1-218ENST00000578469 NXPH3O95157 252 aa13.84□□□□□ -0.19
SREBF1-218ENST00000578469 P0C879 139 aa13.84□□□□□ -0.19
SREBF1-218ENST00000578469 NQO2P16083 231 aa13.84□□□□□ -0.19
SREBF1-218ENST00000578469 CAV2P51636 162 aa13.84□□□□□ -0.19
SREBF1-218ENST00000578469 PRRX1P54821 245 aa13.84□□□□□ -0.19
SREBF1-218ENST00000578469 RTL8BQ17RB0 113 aa13.84□□□□□ -0.19
SREBF1-218ENST00000578469 DHRS7BQ6IAN0 325 aaPredicted RBP13.84□□□□□ -0.19
SREBF1-218ENST00000578469 ALKAL2Q6UX46 152 aa13.84□□□□□ -0.19
SREBF1-218ENST00000578469 ABHD12Q8N2K0 398 aa13.84□□□□□ -0.19
SREBF1-218ENST00000578469 LY6G5BQ8NDX9 201 aa13.84□□□□□ -0.19
SREBF1-218ENST00000578469 CYTL1Q9NRR1 136 aa13.84□□□□□ -0.19
SREBF1-218ENST00000578469 LYRM2Q9NU23 88 aaPredicted RBP13.84□□□□□ -0.19
SREBF1-218ENST00000578469 CACFD1Q9UGQ2 172 aa13.84□□□□□ -0.19
SREBF1-218ENST00000578469 CSPG4Q6UVK1 2322 aa13.84□□□□□ -0.19
SREBF1-218ENST00000578469 FN1P02751 2386 aaKnown RBP13.83□□□□□ -0.19
SREBF1-218ENST00000578469 LOC105371242A0A075B767 164 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms