RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 TM2D1Q9BX74 207 aa10.25□□□□□ -0.77
ERBB2-206ENST00000578373 WFDC1Q9HC57 220 aa10.25□□□□□ -0.77
ERBB2-206ENST00000578373 RNF7Q9UBF6 113 aa10.25□□□□□ -0.77
ERBB2-206ENST00000578373 CDX1P47902 265 aaPredicted RBP10.25□□□□□ -0.77
ERBB2-206ENST00000578373 PKIAP61925 76 aa10.25□□□□□ -0.77
ERBB2-206ENST00000578373 Q56UQ5 140 aa10.25□□□□□ -0.77
ERBB2-206ENST00000578373 FA2HQ7L5A8 372 aa10.25□□□□□ -0.77
ERBB2-206ENST00000578373 GMPPAQ96IJ6 420 aaPredicted RBP10.25□□□□□ -0.77
ERBB2-206ENST00000578373 GSN-AS1Q9NRJ2 163 aa10.25□□□□□ -0.77
ERBB2-206ENST00000578373 M0R2Z0 102 aa10.25□□□□□ -0.77
ERBB2-206ENST00000578373 PRSS3P2Q8NHM4 247 aa10.25□□□□□ -0.77
ERBB2-206ENST00000578373 CHRDL1Q9BU40 450 aa10.25□□□□□ -0.77
ERBB2-206ENST00000578373 PRDM14Q9GZV8 571 aa10.25□□□□□ -0.77
ERBB2-206ENST00000578373 GAL3ST2Q9H3Q3 398 aa10.25□□□□□ -0.77
ERBB2-206ENST00000578373 IGKV3-7A0A075B6H7 116 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 LILRB1Q8NHL6 650 aaPredicted RBP10.24□□□□□ -0.77
ERBB2-206ENST00000578373 WDR61Q9GZS3 305 aaKnown RBP10.24□□□□□ -0.77
ERBB2-206ENST00000578373 CLEC5AQ9NY25 188 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 ZNF785A8K8V0 405 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 B4E171 279 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 F8VVB4 439 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 F8VWA3 439 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 SRP19P09132 144 aaKnown RBP10.24□□□□□ -0.77
ERBB2-206ENST00000578373 TSPAN7P41732 249 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 STARD6P59095 220 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 RPL39P5Q59GN2 51 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 CYB5R2Q6BCY4 276 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 NPVFQ9HCQ7 196 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 CBLN4Q9NTU7 201 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 THADAQ6YHU6 1953 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 A0A1B0GV90 55 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 LOC390937A0A1W2PQ73 354 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 ODAMA1E959 279 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 NEURL1O76050 574 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 ARL14EPLP0DKL9 152 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 PDPNQ86YL7 162 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 TGIF2LYQ8IUE0 185 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 EIF4E3Q8N5X7 224 aaKnown RBP10.24□□□□□ -0.77
ERBB2-206ENST00000578373 IMMP1LQ96LU5 166 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 NUDT16L1Q9BRJ7 211 aaKnown RBP10.24□□□□□ -0.77
ERBB2-206ENST00000578373 SMDT1Q9H4I9 107 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 OR51B2Q9Y5P1 312 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 NLRC5Q86WI3 1866 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 PIEZO2Q9H5I5 2752 aa10.24□□□□□ -0.77
ERBB2-206ENST00000578373 J3KRW8 73 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 CXorf1O96002 111 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 S100A4P26447 101 aaKnown RBP10.23□□□□□ -0.77
ERBB2-206ENST00000578373 ATOH7Q8N100 152 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 OR1P1Q8NH06 330 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 Q8WTZ3 238 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 TMEM167BQ9NRX6 74 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 DEPPQ9NTK1 212 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 C17orf98A8MV24 154 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 C12orf77C9JDV5 145 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 OTX1P32242 354 aaPredicted RBP10.23□□□□□ -0.77
ERBB2-206ENST00000578373 FAM166AQ6J272 317 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 OR51G1Q8NGK1 321 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 FREM1Q5H8C1 2179 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 CSPG4Q6UVK1 2322 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 A0A1W2PN81 502 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 E9PQ18 207 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 RRHO14718 337 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 PDE6DO43924 150 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 CLPSP04118 112 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 CRYBB3P26998 211 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 DDTP30046 118 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 TFF3Q07654 80 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 KCNMB1Q16558 191 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 SSBP3Q9BWW4 388 aaPredicted RBP10.23□□□□□ -0.77
ERBB2-206ENST00000578373 AAMDCQ9H7C9 122 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 MYO18BQ8IUG5 2567 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 FNDC1Q4ZHG4 1894 aaPredicted RBP10.23□□□□□ -0.77
ERBB2-206ENST00000578373 REG1AP05451 166 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 OR5AL1P0C617 328 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 AGAP20933 346 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 CBLN1P23435 193 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 COL8A1P27658 744 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 UCP3P55916 312 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 NHLH1Q02575 133 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 ABLIM2Q6H8Q1 611 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 PQLC2Q6ZP29 291 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 ZNF441Q8N8Z8 693 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 FAM117AQ9C073 453 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 CYTL1Q9NRR1 136 aa10.23□□□□□ -0.77
ERBB2-206ENST00000578373 M0R296 226 aa10.22□□□□□ -0.77
ERBB2-206ENST00000578373 UCP1P25874 307 aa10.22□□□□□ -0.77
ERBB2-206ENST00000578373 MRPL14Q6P1L8 145 aaKnown RBP10.22□□□□□ -0.77
ERBB2-206ENST00000578373 OR4C5Q8NGB2 326 aa10.22□□□□□ -0.77
ERBB2-206ENST00000578373 ZNF596Q8TC21 504 aa10.22□□□□□ -0.77
ERBB2-206ENST00000578373 FAM222BQ8WU58 562 aa10.22□□□□□ -0.77
ERBB2-206ENST00000578373 CHRNA10Q9GZZ6 450 aa10.22□□□□□ -0.77
ERBB2-206ENST00000578373 SEBOXQ9HB31 216 aaPredicted RBP10.22□□□□□ -0.77
ERBB2-206ENST00000578373 TMEM140Q9NV12 185 aa10.22□□□□□ -0.77
ERBB2-206ENST00000578373 CLDN16Q9Y5I7 305 aa10.22□□□□□ -0.77
ERBB2-206ENST00000578373 IGKV1-27A0A075B6S5 117 aa10.22□□□□□ -0.77
ERBB2-206ENST00000578373 PGPEP1LA6NFU8 196 aa10.22□□□□□ -0.77
ERBB2-206ENST00000578373 MGST3O14880 152 aa10.22□□□□□ -0.77
ERBB2-206ENST00000578373 HPRT1P00492 218 aa10.22□□□□□ -0.77
ERBB2-206ENST00000578373 PRB4P10163 310 aaPredicted RBP10.22□□□□□ -0.77
ERBB2-206ENST00000578373 ZNF645Q8N7E2 425 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms