RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	AKIP1	Q9NQ31	210 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	C12orf4	Q9NQ89	552 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	PLEKHJ1	Q9NW61	149 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	KCNIP1	Q9NZI2	227 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	PIPOX	Q9P0Z9	390 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	CKLF	Q9UBR5	152 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TRAV3	A0A0B4J244	114 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	HMX3	A6NHT5	357 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MSGN1	A6NI15	193 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	IFITM5	A6NNB3	132 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329		F8W735	103 aa	Predicted RBP	3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	EBAG9	O00559	213 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MYL12B	O14950	172 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	FABP7	O15540	132 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	HSPA12A	O43301	675 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	RBBP9	O75884	186 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TUSC2	O75896	110 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	NDUFB8	O95169	186 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	SPDEF	O95238	335 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	LY86	O95711	162 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	HLA-A	P01891	365 aa	Known RBP	3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TFAP2A	P05549	437 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	CLEC2L	P0C7M8	214 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	AREG	P15514	252 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ARSB	P15848	533 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	HIST1H1D	P16402	221 aa	Known RBP	3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ZBTB25	P24278	435 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MAPK3	P27361	379 aa	Predicted RBP	3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MC5R	P33032	325 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MFAP2	P55001	183 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	RPS16	P62249	146 aa	Known RBP	3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MLLT11	Q13015	90 aa	Predicted RBP	3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MED22	Q15528	200 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	RAB11B	Q15907	218 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	GLT8D1	Q68CQ7	371 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TMEM65	Q6PI78	240 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329		Q6ZS49	121 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MOB1B	Q7L9L4	216 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	PDPN	Q86YL7	162 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	VKORC1L1	Q8N0U8	176 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TCTEX1D1	Q8N7M0	179 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	OR9G4	Q8NGQ1	327 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	OR10R2	Q8NGX6	335 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	SETD6	Q8TBK2	473 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	CACNG8	Q8WXS5	425 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	SLC25A38	Q96DW6	304 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MYCBP	Q99417	103 aa	Predicted RBP	3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MGLL	Q99685	303 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	FAM110A	Q9BQ89	295 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MND1	Q9BWT6	205 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	OR2D2	Q9H210	308 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	RNF167	Q9H6Y7	350 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ZC4H2	Q9NQZ6	224 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	SLC35D1	Q9NTN3	355 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	SIGLEC8	Q9NYZ4	499 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ZNF221	Q9UK13	617 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ERGIC3	Q9Y282	383 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	LRRC42	Q9Y546	428 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329		S4R3C0	116 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	KIAA1109	Q2LD37	5005 aa		3.34	□□□□□ -1.87
PPP4R1-209	ENST00000578329	VPS13D	Q5THJ4	4388 aa		3.34	□□□□□ -1.88
PPP4R1-209	ENST00000578329	PCLO	Q9Y6V0	5065 aa		3.34	□□□□□ -1.88
PPP4R1-209	ENST00000578329	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	TRAV1-2	A0A0B4J238	106 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	TMEM213	A2RRL7	107 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	PPP5D1	E7EU14	171 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329		H3BUA1	57 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329		H7C2Y5	167 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	BET1	O15155	118 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	DENR	O43583	198 aa	Known RBP	3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	S1PR2	O95136	353 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	HLA-DQB1	P01920	261 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	GSTP1	P09211	210 aa	Known RBP	3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	SAA1	P0DJI8	122 aa	Predicted RBP	3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	LYL1	P12980	280 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	NFYA	P23511	347 aa	Predicted RBP	3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	CALR	P27797	417 aa	Known RBP	3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	UBE2K	P61086	200 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	TBCE	Q15813	527 aa	Predicted RBP	3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	DEFB114	Q30KQ6	69 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	CD300E	Q496F6	205 aa	Predicted RBP	3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	UNQ9165/PRO28630	Q6UXU0	137 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	PRSS48	Q7RTY5	328 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	PUSL1	Q8N0Z8	303 aa	Known RBP	3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	TTC9C	Q8N5M4	171 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	DEFB125	Q8N687	156 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	OR4A4P	Q8NGN8	299 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	OR5H6	Q8NGV6	325 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	NUDCD2	Q8WVJ2	157 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	SRSF12	Q8WXF0	261 aa	Known RBP	3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	FLYWCH2	Q96CP2	140 aa	Known RBP	3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	WDR89	Q96FK6	387 aa	Predicted RBP	3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	CMSS1	Q9BQ75	279 aa	Known RBP	3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	RIMS4	Q9H426	269 aa	Predicted RBP	3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	SLA2	Q9H6Q3	261 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	ACOT13	Q9NPJ3	140 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	C8orf4	Q9NR00	106 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	NDUFB11	Q9NX14	153 aa		3.33	□□□□□ -1.88
PPP4R1-209	ENST00000578329	CHCHD3	Q9NX63	227 aa	Known RBP	3.33	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms