RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 ZNF616Q08AN1 781 aa17.81■□□□□ 0.44
VAPA-205ENST00000578314 ASPHD1Q5U4P2 390 aa17.81■□□□□ 0.44
VAPA-205ENST00000578314 YIPF6Q96EC8 236 aa17.81■□□□□ 0.44
VAPA-205ENST00000578314 HARBI1Q96MB7 349 aa17.81■□□□□ 0.44
VAPA-205ENST00000578314 OR5B12Q96R08 314 aa17.81■□□□□ 0.44
VAPA-205ENST00000578314 ANXA10Q9UJ72 324 aa17.81■□□□□ 0.44
VAPA-205ENST00000578314 SPATA2Q9UM82 520 aa17.81■□□□□ 0.44
VAPA-205ENST00000578314 TRAV18A0A075B6X5 111 aa17.8■□□□□ 0.44
VAPA-205ENST00000578314 LINC00473A8K010 186 aa17.8■□□□□ 0.44
VAPA-205ENST00000578314 SHOXO15266 292 aa17.8■□□□□ 0.44
VAPA-205ENST00000578314 NFYAP23511 347 aaPredicted RBP17.8■□□□□ 0.44
VAPA-205ENST00000578314 PJVKQ0ZLH3 352 aa17.8■□□□□ 0.44
VAPA-205ENST00000578314 C9orf66Q5T8R8 295 aa17.8■□□□□ 0.44
VAPA-205ENST00000578314 CROCCP3Q8IVE0 287 aa17.8■□□□□ 0.44
VAPA-205ENST00000578314 ZNF645Q8N7E2 425 aa17.8■□□□□ 0.44
VAPA-205ENST00000578314 CASTOR1Q8WTX7 329 aa17.8■□□□□ 0.44
VAPA-205ENST00000578314 AIREO43918 545 aa17.79■□□□□ 0.44
VAPA-205ENST00000578314 SLC22A5O76082 557 aa17.79■□□□□ 0.44
VAPA-205ENST00000578314 DGCR2P98153 550 aa17.79■□□□□ 0.44
VAPA-205ENST00000578314 SLA2Q9H6Q3 261 aa17.79■□□□□ 0.44
VAPA-205ENST00000578314 VCX3AQ9NNX9 186 aa17.79■□□□□ 0.44
VAPA-205ENST00000578314 SCOCQ9UIL1 159 aa17.79■□□□□ 0.44
VAPA-205ENST00000578314 SEC14L6B5MCN3 397 aa17.78■□□□□ 0.44
VAPA-205ENST00000578314 RAMP3O60896 148 aa17.78■□□□□ 0.44
VAPA-205ENST00000578314 TUSC2O75896 110 aa17.78■□□□□ 0.44
VAPA-205ENST00000578314 CNIH1O95406 144 aa17.78■□□□□ 0.44
VAPA-205ENST00000578314 IGLV2-14P01704 120 aa17.78■□□□□ 0.44
VAPA-205ENST00000578314 LGALS1P09382 135 aaKnown RBP17.78■□□□□ 0.44
VAPA-205ENST00000578314 CD40LGP29965 261 aa17.78■□□□□ 0.44
VAPA-205ENST00000578314 TGFBR1P36897 503 aa17.78■□□□□ 0.44
VAPA-205ENST00000578314 DEFB121Q5J5C9 76 aa17.78■□□□□ 0.44
VAPA-205ENST00000578314 TEX45Q8NA69 505 aa17.78■□□□□ 0.44
VAPA-205ENST00000578314 GRPEL2Q8TAA5 225 aa17.78■□□□□ 0.44
VAPA-205ENST00000578314 TMEM68Q96MH6 324 aa17.78■□□□□ 0.44
VAPA-205ENST00000578314 AUNIPQ9H7T9 357 aa17.78■□□□□ 0.44
VAPA-205ENST00000578314 DIABLOQ9NR28 239 aa17.78■□□□□ 0.44
VAPA-205ENST00000578314 IGKV1D-13A0A0B4J2D9 117 aa17.77■□□□□ 0.44
VAPA-205ENST00000578314 J3QRK9 145 aa17.77■□□□□ 0.44
VAPA-205ENST00000578314 IGKV1-13P0DP09 117 aa17.77■□□□□ 0.44
VAPA-205ENST00000578314 RPS19P39019 145 aaKnown RBP17.77■□□□□ 0.44
VAPA-205ENST00000578314 UBE2KP61086 200 aa17.77■□□□□ 0.44
VAPA-205ENST00000578314 MRGPRG-AS1Q2M3A8 158 aa17.77■□□□□ 0.44
VAPA-205ENST00000578314 HOGA1Q86XE5 327 aa17.77■□□□□ 0.44
VAPA-205ENST00000578314 OSR1Q8TAX0 266 aaPredicted RBP17.77■□□□□ 0.44
VAPA-205ENST00000578314 RHOVQ96L33 236 aa17.77■□□□□ 0.44
VAPA-205ENST00000578314 MS4A10Q96PG2 267 aa17.77■□□□□ 0.44
VAPA-205ENST00000578314 ALX4Q9H161 411 aaPredicted RBP17.77■□□□□ 0.44
VAPA-205ENST00000578314 RBMX2Q9Y388 322 aaKnown RBP17.77■□□□□ 0.44
VAPA-205ENST00000578314 TRIM64CA6NLI5 447 aa17.76■□□□□ 0.43
VAPA-205ENST00000578314 CRYZL1O95825 349 aa17.76■□□□□ 0.43
VAPA-205ENST00000578314 VMA21Q3ZAQ7 101 aa17.76■□□□□ 0.43
VAPA-205ENST00000578314 BEST4Q8NFU0 473 aa17.76■□□□□ 0.43
VAPA-205ENST00000578314 LINC01619G3V211 115 aa17.75■□□□□ 0.43
VAPA-205ENST00000578314 H3BUA1 57 aa17.75■□□□□ 0.43
VAPA-205ENST00000578314 BRI3O95415 125 aa17.75■□□□□ 0.43
VAPA-205ENST00000578314 EIF4EBP1Q13541 118 aaPredicted RBP17.75■□□□□ 0.43
VAPA-205ENST00000578314 OVCH2Q7RTZ1 564 aa17.75■□□□□ 0.43
VAPA-205ENST00000578314 GVQW1Q8N7I0 195 aa17.75■□□□□ 0.43
VAPA-205ENST00000578314 POC5Q8NA72 575 aa17.75■□□□□ 0.43
VAPA-205ENST00000578314 DCUN1D4Q92564 292 aa17.75■□□□□ 0.43
VAPA-205ENST00000578314 COL7A1Q02388 2944 aa17.75■□□□□ 0.43
VAPA-205ENST00000578314 XRCC3O43542 346 aa17.74■□□□□ 0.43
VAPA-205ENST00000578314 INSL3P51460 131 aa17.74■□□□□ 0.43
VAPA-205ENST00000578314 TPPP2P59282 170 aa17.74■□□□□ 0.43
VAPA-205ENST00000578314 ARPC4P59998 168 aa17.74■□□□□ 0.43
VAPA-205ENST00000578314 RPL30P62888 115 aaKnown RBP17.74■□□□□ 0.43
VAPA-205ENST00000578314 PRSS8Q16651 343 aa17.74■□□□□ 0.43
VAPA-205ENST00000578314 OR5T1Q8NG75 326 aa17.74■□□□□ 0.43
VAPA-205ENST00000578314 HSD17B10Q99714 261 aaKnown RBP17.74■□□□□ 0.43
VAPA-205ENST00000578314 PRELID3BQ9Y3B1 194 aa17.74■□□□□ 0.43
VAPA-205ENST00000578314 DNAH9Q9NYC9 4486 aa17.74■□□□□ 0.43
VAPA-205ENST00000578314 FCGR3BO75015 233 aa17.73■□□□□ 0.43
VAPA-205ENST00000578314 TRGV3P03979 118 aa17.73■□□□□ 0.43
VAPA-205ENST00000578314 HSPB1P04792 205 aaKnown RBP17.73■□□□□ 0.43
VAPA-205ENST00000578314 CBX5P45973 191 aa17.73■□□□□ 0.43
VAPA-205ENST00000578314 LSM3P62310 102 aaKnown RBP17.73■□□□□ 0.43
VAPA-205ENST00000578314 KCTD9Q7L273 389 aa17.73■□□□□ 0.43
VAPA-205ENST00000578314 DLX4Q92988 240 aaPredicted RBP17.73■□□□□ 0.43
VAPA-205ENST00000578314 S100A16Q96FQ6 103 aaKnown RBP17.73■□□□□ 0.43
VAPA-205ENST00000578314 IGHV4OR15-8A0A075B7B6 117 aa17.72■□□□□ 0.43
VAPA-205ENST00000578314 A0A087WW49 117 aa17.72■□□□□ 0.43
VAPA-205ENST00000578314 OVOL1O14753 267 aa17.72■□□□□ 0.43
VAPA-205ENST00000578314 IGHV3-11P01762 117 aa17.72■□□□□ 0.43
VAPA-205ENST00000578314 FCGR2CP31995 323 aa17.72■□□□□ 0.43
VAPA-205ENST00000578314 DCTN2Q13561 401 aaKnown RBP17.72■□□□□ 0.43
VAPA-205ENST00000578314 MSMO1Q15800 293 aa17.72■□□□□ 0.43
VAPA-205ENST00000578314 ZNF355PQ9NSJ1 428 aa17.72■□□□□ 0.43
VAPA-205ENST00000578314 MSGN1A6NI15 193 aa17.71■□□□□ 0.43
VAPA-205ENST00000578314 PTHLHP12272 177 aa17.71■□□□□ 0.43
VAPA-205ENST00000578314 AADACP22760 399 aa17.71■□□□□ 0.43
VAPA-205ENST00000578314 SLURP1P55000 103 aa17.71■□□□□ 0.43
VAPA-205ENST00000578314 UBE2NLQ5JXB2 153 aa17.71■□□□□ 0.43
VAPA-205ENST00000578314 IDO2Q6ZQW0 420 aa17.71■□□□□ 0.43
VAPA-205ENST00000578314 ZNF429Q86V71 674 aa17.71■□□□□ 0.43
VAPA-205ENST00000578314 MFSD4AQ8N468 514 aa17.71■□□□□ 0.43
VAPA-205ENST00000578314 MRPS7Q9Y2R9 242 aaKnown RBP17.71■□□□□ 0.43
VAPA-205ENST00000578314 A0A0G2JLM5 398 aa17.7■□□□□ 0.42
VAPA-205ENST00000578314 SAA1P0DJI8 122 aaPredicted RBP17.7■□□□□ 0.42
VAPA-205ENST00000578314 ECI1P42126 302 aa17.7■□□□□ 0.42
VAPA-205ENST00000578314 BRWD1-AS2P59051 145 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms