RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 OR1N2Q8NGR9 330 aa9.21□□□□□ -0.94
SEC22B-201ENST00000578049 OR4A5Q8NH83 315 aa9.21□□□□□ -0.94
SEC22B-201ENST00000578049 VCX2Q9H322 139 aa9.21□□□□□ -0.94
SEC22B-201ENST00000578049 ATAD5Q96QE3 1844 aa9.21□□□□□ -0.94
SEC22B-201ENST00000578049 A0A1B0GV90 55 aa9.21□□□□□ -0.94
SEC22B-201ENST00000578049 TMUB1Q9BVT8 246 aa9.21□□□□□ -0.94
SEC22B-201ENST00000578049 SOD3P08294 240 aa9.21□□□□□ -0.94
SEC22B-201ENST00000578049 BTCP35070 178 aa9.21□□□□□ -0.94
SEC22B-201ENST00000578049 SAPCD1Q5SSQ6 148 aa9.21□□□□□ -0.94
SEC22B-201ENST00000578049 AMMECR1LQ6DCA0 310 aa9.21□□□□□ -0.94
SEC22B-201ENST00000578049 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.21□□□□□ -0.94
SEC22B-201ENST00000578049 AUP1Q9Y679 476 aa9.21□□□□□ -0.94
SEC22B-201ENST00000578049 MCM3APO60318 1980 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 FBLL1A6NHQ2 334 aaKnown RBP9.2□□□□□ -0.94
SEC22B-201ENST00000578049 MSGN1A6NI15 193 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 C16orf97H3BN30 126 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 ZNF818PQ6ZRF7 136 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 NEUROG1Q92886 237 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 TMEM242Q9NWH2 141 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 A0A1B0GV72 72 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 A0A1W2PS18 150 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 IGHV3-13P01766 116 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 IGHV3-7P01780 117 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 NABP2Q9BQ15 211 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 TTTY12Q9BZ98 90 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 CALYQ9NYX4 217 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 UBE2CO00762 179 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 NUBP1P53384 320 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 EGR4Q05215 589 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 TMEM54Q969K7 222 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 TRAV14DV4A0A0A6YYC5 116 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 NPIPB6E9PJ23 425 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 STAG3L3P0CL85 134 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 IGFBP3P17936 291 aaPredicted RBP9.2□□□□□ -0.94
SEC22B-201ENST00000578049 ZNF488Q96MN9 340 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 AHCTF1Q8WYP5 2266 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 SIGLEC5O15389 551 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 SIGLEC14Q08ET2 396 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 ASPHD2Q6ICH7 369 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 TMEM136Q6ZRR5 245 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 PRDM13Q9H4Q3 707 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 TMEM56-RWDD3S4R434 201 aa9.2□□□□□ -0.94
SEC22B-201ENST00000578049 MEX3AA1L020 520 aaKnown RBP9.19□□□□□ -0.94
SEC22B-201ENST00000578049 AHRRA9YTQ3 701 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 CCL4P13236 92 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 FAM131CQ96AQ9 280 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 TMEM186Q96B77 213 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 ZG16O60844 167 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 C1QTNF9BB2RNN3 333 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 PPP1R17O96001 155 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 FHITP49789 147 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 OR4C46A6NHA9 309 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 LMX1BO60663 402 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 CRYBB3P26998 211 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 RND2P52198 227 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 DRAM1Q8N682 238 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 WNT2BQ93097 391 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 MIEN1Q9BRT3 115 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 IDI2-AS1Q9NZ38 188 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 A1L4Q6 167 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 PRR33A8MZF0 331 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 C4orf51C9J302 202 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 KLK10O43240 276 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 IL11P20809 199 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 CLDND2Q8NHS1 167 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 TMEM170AQ8WVE7 144 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 THY1P04216 161 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 DNM1P46Q6ZS02 220 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 OR4C13Q8NGP0 309 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 RND1Q92730 232 aa9.19□□□□□ -0.94
SEC22B-201ENST00000578049 STRCP1A6NGW2 1772 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 IGHV1-45A0A0A0MS14 117 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 C1QL4Q86Z23 238 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 SYT8Q8NBV8 401 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 NPCDR1Q9BY65 106 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 WNT5BQ9H1J7 359 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 SLC35B1P78383 322 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 SHISA5Q8N114 240 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 TNFSF10P50591 281 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 SRSF5Q13243 272 aaKnown RBP9.18□□□□□ -0.94
SEC22B-201ENST00000578049 CENPWQ5EE01 88 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 HES3Q5TGS1 186 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 FOXJ2Q9P0K8 574 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 DNLZQ5SXM8 178 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 RTBDNQ9BSG5 229 aaPredicted RBP9.18□□□□□ -0.94
SEC22B-201ENST00000578049 APC2O95996 2303 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 ICE1Q9Y2F5 2266 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 ID4P47928 161 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 C1orf210Q8IVY1 113 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 LRTM2Q8N967 370 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 OSR1Q8TAX0 266 aaPredicted RBP9.18□□□□□ -0.94
SEC22B-201ENST00000578049 ZNF502Q8TBZ5 544 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 CACNG8Q8WXS5 425 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 HIST1H4GQ99525 98 aa9.18□□□□□ -0.94
SEC22B-201ENST00000578049 A0A1B0GW64 132 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 FAM157AC9JC47 383 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 H3BVH4 76 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 RBFOX2O43251 390 aaKnown RBP eCLIP9.17□□□□□ -0.949e-6■■□□□ 11.7
SEC22B-201ENST00000578049 MGPP08493 103 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 MFAP4P55083 255 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms