RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 A0A1W2PN81 502 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 FAM90A10PA6NDY2 464 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 FAM90A7PA6NKC0 464 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 FAM90A23PA8MXZ1 464 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 NBR2O15453 112 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 YPEL1O60688 119 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 CLN5O75503 358 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 IGHV3-11P01762 117 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 HLA-DRB1P01911 266 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 NHLRC4P0CG21 123 aaPredicted RBP4.8□□□□□ -1.64
NUP88-212ENST00000576708 SAA2P0DJI9 122 aaPredicted RBP4.8□□□□□ -1.64
NUP88-212ENST00000576708 CHATP28329 748 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 CHRNA7P36544 502 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 RAB9AP51151 201 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 PSMD7P51665 324 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 WNT4P56705 351 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 LINC00205P59089 165 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 ZNF616Q08AN1 781 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 UNC119Q13432 240 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 MED21Q13503 144 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 HMGN3Q15651 99 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 TBCEQ15813 527 aaPredicted RBP4.8□□□□□ -1.64
NUP88-212ENST00000576708 ECSCRQ19T08 205 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 TMEM30BQ3MIR4 351 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 KCTD21Q4G0X4 260 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 ACSM3Q53FZ2 586 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 ZNF833PQ6ZTB9 187 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 HAPLN4Q86UW8 402 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 SBSPONQ8IVN8 264 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 NANOGP1Q8N7R0 232 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 SETD9Q8NE22 299 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 ABHD5Q8WTS1 349 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 IL1F10Q8WWZ1 152 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 DLX4Q92988 240 aaPredicted RBP4.8□□□□□ -1.64
NUP88-212ENST00000576708 RNF125Q96EQ8 232 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 ABHD14BQ96IU4 210 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 UBE2E2Q96LR5 201 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 YPEL2Q96QA6 119 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 CLCC1Q96S66 551 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 FAM103A1Q9BTL3 118 aaKnown RBP4.8□□□□□ -1.64
NUP88-212ENST00000576708 TMED9Q9BVK6 235 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 IFI27L2Q9H2X8 130 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 SCPEP1Q9HB40 452 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 RAB9BQ9NP90 201 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 OR1A1Q9P1Q5 309 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 JPT1Q9UK76 154 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 RNF150Q9ULK6 438 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 VSIG4Q9Y279 399 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 IGHV4OR15-8A0A075B7B6 117 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 A0A087WW49 117 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 OVOL1O14753 267 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 MYL12BO14950 172 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 SOCS1O15524 211 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 PROP1O75360 226 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 SAP30O75446 220 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 CA11O75493 328 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 NDUFA3O95167 84 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 TNFRSF6BO95407 300 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 OR8U8P0C7N1 319 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 CT45A6P0DMU7 189 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 CT45A5P0DMU8 189 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 CT45A7P0DMV0 189 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 OR5H8P0DN80 308 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 SPNP16150 400 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 TAS2R43P59537 309 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 RPS27AP62979 156 aaKnown RBP4.79□□□□□ -1.64
NUP88-212ENST00000576708 CX3CL1P78423 397 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 QRFPP83859 136 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 RUNX1Q01196 453 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 DCTN2Q13561 401 aaKnown RBP4.79□□□□□ -1.64
NUP88-212ENST00000576708 P2RY14Q15391 338 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 BAK1Q16611 211 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 RBM48Q5RL73 367 aaKnown RBP4.79□□□□□ -1.64
NUP88-212ENST00000576708 C1orf100Q5SVJ3 147 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 ZNF880Q6PDB4 577 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 PET117Q6UWS5 81 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 CEACAM19Q7Z692 300 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 C8orf59Q8N0T1 100 aaPredicted RBP4.79□□□□□ -1.64
NUP88-212ENST00000576708 MINDY2Q8NBR6 621 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 NPBQ8NG41 125 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 OR2AK2Q8NG84 335 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 ARPC1AQ92747 370 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 GALMQ96C23 342 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 MS4A10Q96PG2 267 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 NEDD4LQ96PU5 975 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 GFI1Q99684 422 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 THAP7Q9BT49 309 aaPredicted RBP4.79□□□□□ -1.64
NUP88-212ENST00000576708 CHMP1AQ9HD42 196 aaPredicted RBP4.79□□□□□ -1.64
NUP88-212ENST00000576708 ISYNA1Q9NPH2 558 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 PLCXD1Q9NUJ7 323 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 NUDT15Q9NV35 164 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 GAR1Q9NY12 217 aaKnown RBP4.79□□□□□ -1.64
NUP88-212ENST00000576708 CNOT2Q9NZN8 540 aaKnown RBP4.79□□□□□ -1.64
NUP88-212ENST00000576708 AK3Q9UIJ7 227 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 ZNF580Q9UK33 172 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 SACSQ9NZJ4 4579 aa4.79□□□□□ -1.64
NUP88-212ENST00000576708 TENM3Q9P273 2699 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 TMEM14DPA8MWL7 114 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 ANKRD65E5RJM6 399 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 H0YJW9 148 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms