RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 CD33P20138 364 aa15.23■□□□□ 0.03
ATPAF1-214ENST00000576409 HGFACQ04756 655 aa15.23■□□□□ 0.03
ATPAF1-214ENST00000576409 HEPN1Q6WQI6 88 aa15.23■□□□□ 0.03
ATPAF1-214ENST00000576409 FAM131CQ96AQ9 280 aa15.23■□□□□ 0.03
ATPAF1-214ENST00000576409 CLDN16Q9Y5I7 305 aa15.23■□□□□ 0.03
ATPAF1-214ENST00000576409 ATP1A1-AS1Q5TC04 95 aa15.23■□□□□ 0.03
ATPAF1-214ENST00000576409 PQLC2Q6ZP29 291 aa15.23■□□□□ 0.03
ATPAF1-214ENST00000576409 IGKV1-27A0A075B6S5 117 aa15.22■□□□□ 0.03
ATPAF1-214ENST00000576409 K7EQM0 130 aa15.22■□□□□ 0.03
ATPAF1-214ENST00000576409 CXorf1O96002 111 aa15.22■□□□□ 0.03
ATPAF1-214ENST00000576409 GZMHP20718 246 aa15.22■□□□□ 0.03
ATPAF1-214ENST00000576409 CRYBB3P26998 211 aa15.22■□□□□ 0.03
ATPAF1-214ENST00000576409 BET1LQ9NYM9 111 aa15.22■□□□□ 0.03
ATPAF1-214ENST00000576409 CLPSP04118 112 aa15.22■□□□□ 0.03
ATPAF1-214ENST00000576409 HTR1DP28221 377 aa15.22■□□□□ 0.03
ATPAF1-214ENST00000576409 PRDX2P32119 198 aa15.22■□□□□ 0.03
ATPAF1-214ENST00000576409 ATP5G3P48201 142 aa15.22■□□□□ 0.03
ATPAF1-214ENST00000576409 TNFAIP6P98066 277 aaPredicted RBP15.22■□□□□ 0.03
ATPAF1-214ENST00000576409 BARX1Q9HBU1 254 aaPredicted RBP15.22■□□□□ 0.03
ATPAF1-214ENST00000576409 FAM157AC9JC47 383 aa15.22■□□□□ 0.03
ATPAF1-214ENST00000576409 TCF23Q7RTU1 214 aa15.22■□□□□ 0.03
ATPAF1-214ENST00000576409 TMEM54Q969K7 222 aa15.22■□□□□ 0.03
ATPAF1-214ENST00000576409 MRPL18Q9H0U6 180 aaKnown RBP15.22■□□□□ 0.03
ATPAF1-214ENST00000576409 FBLN5Q9UBX5 448 aa15.22■□□□□ 0.03
ATPAF1-214ENST00000576409 ODAMA1E959 279 aa15.21■□□□□ 0.03
ATPAF1-214ENST00000576409 CYC1P08574 325 aa15.21■□□□□ 0.03
ATPAF1-214ENST00000576409 COX7A1P24310 79 aa15.21■□□□□ 0.03
ATPAF1-214ENST00000576409 RPL11P62913 178 aaKnown RBP15.21■□□□□ 0.03
ATPAF1-214ENST00000576409 RIPPLY2Q5TAB7 128 aa15.21■□□□□ 0.03
ATPAF1-214ENST00000576409 DOLPP1Q86YN1 238 aa15.21■□□□□ 0.03
ATPAF1-214ENST00000576409 TMEM183AQ8IXX5 376 aa15.21■□□□□ 0.03
ATPAF1-214ENST00000576409 TMEM171Q8WVE6 324 aa15.21■□□□□ 0.03
ATPAF1-214ENST00000576409 FREM1Q5H8C1 2179 aa15.21■□□□□ 0.03
ATPAF1-214ENST00000576409 UCP2P55851 309 aa15.21■□□□□ 0.03
ATPAF1-214ENST00000576409 P2RY6Q15077 328 aa15.21■□□□□ 0.03
ATPAF1-214ENST00000576409 PRSS3P2Q8NHM4 247 aa15.21■□□□□ 0.03
ATPAF1-214ENST00000576409 GNB4Q9HAV0 340 aa15.21■□□□□ 0.03
ATPAF1-214ENST00000576409 TMSB15BA0A087X1C1 80 aa15.21■□□□□ 0.03
ATPAF1-214ENST00000576409 IGHV3-72A0A0B4J1Y9 119 aa15.21■□□□□ 0.03
ATPAF1-214ENST00000576409 RRHO14718 337 aa15.21■□□□□ 0.03
ATPAF1-214ENST00000576409 HIST1H1BP16401 226 aaKnown RBP15.21■□□□□ 0.03
ATPAF1-214ENST00000576409 TUBA4BQ9H853 241 aa15.21■□□□□ 0.03
ATPAF1-214ENST00000576409 SDF2L1Q9HCN8 221 aa15.21■□□□□ 0.03
ATPAF1-214ENST00000576409 NPVFQ9HCQ7 196 aa15.21■□□□□ 0.03
ATPAF1-214ENST00000576409 SCGB2A1O75556 95 aa15.21■□□□□ 0.02
ATPAF1-214ENST00000576409 KLF3P57682 345 aaPredicted RBP15.21■□□□□ 0.02
ATPAF1-214ENST00000576409 CCL8P80075 99 aa15.21■□□□□ 0.02
ATPAF1-214ENST00000576409 FA2HQ7L5A8 372 aa15.21■□□□□ 0.02
ATPAF1-214ENST00000576409 DEFB123Q8N688 67 aa15.21■□□□□ 0.02
ATPAF1-214ENST00000576409 C17orf98A8MV24 154 aa15.2■□□□□ 0.02
ATPAF1-214ENST00000576409 GCGP01275 180 aa15.2■□□□□ 0.02
ATPAF1-214ENST00000576409 QRFPP83859 136 aa15.2■□□□□ 0.02
ATPAF1-214ENST00000576409 P2RX4Q99571 388 aa15.2■□□□□ 0.02
ATPAF1-214ENST00000576409 WASHC3Q9Y3C0 194 aa15.2■□□□□ 0.02
ATPAF1-214ENST00000576409 IL3RAP26951 378 aa15.2■□□□□ 0.02
ATPAF1-214ENST00000576409 SAP25Q8TEE9 199 aa15.2■□□□□ 0.02
ATPAF1-214ENST00000576409 LYZP61626 148 aa15.2■□□□□ 0.02
ATPAF1-214ENST00000576409 NHLH1Q02575 133 aa15.2■□□□□ 0.02
ATPAF1-214ENST00000576409 GCSAMLQ5JQS6 135 aa15.2■□□□□ 0.02
ATPAF1-214ENST00000576409 C18orf12Q96KH6 178 aa15.2■□□□□ 0.02
ATPAF1-214ENST00000576409 HARBI1Q96MB7 349 aa15.2■□□□□ 0.02
ATPAF1-214ENST00000576409 RNF2Q99496 336 aa15.2■□□□□ 0.02
ATPAF1-214ENST00000576409 OR6C3Q9NZP0 311 aa15.2■□□□□ 0.02
ATPAF1-214ENST00000576409 TIMM9Q9Y5J7 89 aa15.2■□□□□ 0.02
ATPAF1-214ENST00000576409 NCOA6Q14686 2063 aaPredicted RBP15.19■□□□□ 0.02
ATPAF1-214ENST00000576409 OR5AL1P0C617 328 aa15.19■□□□□ 0.02
ATPAF1-214ENST00000576409 BRS3P32247 399 aa15.19■□□□□ 0.02
ATPAF1-214ENST00000576409 LGALS4P56470 323 aa15.19■□□□□ 0.02
ATPAF1-214ENST00000576409 BCL2L2Q92843 193 aaPredicted RBP15.19■□□□□ 0.02
ATPAF1-214ENST00000576409 TMEM56Q96MV1 263 aa15.19■□□□□ 0.02
ATPAF1-214ENST00000576409 TMEM167BQ9NRX6 74 aa15.19■□□□□ 0.02
ATPAF1-214ENST00000576409 FNDC1Q4ZHG4 1894 aaPredicted RBP15.19■□□□□ 0.02
ATPAF1-214ENST00000576409 SIAH2O43255 324 aa15.19■□□□□ 0.02
ATPAF1-214ENST00000576409 KCNMB1Q16558 191 aa15.19■□□□□ 0.02
ATPAF1-214ENST00000576409 NAPSAO96009 420 aa15.19■□□□□ 0.02
ATPAF1-214ENST00000576409 CLEC3BP05452 202 aa15.19■□□□□ 0.02
ATPAF1-214ENST00000576409 RPL31P62899 125 aaKnown RBP15.19■□□□□ 0.02
ATPAF1-214ENST00000576409 CTAG1AP78358 180 aa15.19■□□□□ 0.02
ATPAF1-214ENST00000576409 WDR73Q6P4I2 378 aa15.19■□□□□ 0.02
ATPAF1-214ENST00000576409 ZNF525Q8N782 197 aa15.19■□□□□ 0.02
ATPAF1-214ENST00000576409 WNT10AQ9GZT5 417 aa15.19■□□□□ 0.02
ATPAF1-214ENST00000576409 SP1P08047 785 aa15.18■□□□□ 0.02
ATPAF1-214ENST00000576409 ABLIM2Q6H8Q1 611 aa15.18■□□□□ 0.02
ATPAF1-214ENST00000576409 ZNRF1Q8ND25 227 aa15.18■□□□□ 0.02
ATPAF1-214ENST00000576409 NEURL1O76050 574 aa15.18■□□□□ 0.02
ATPAF1-214ENST00000576409 SRIP30626 198 aa15.18■□□□□ 0.02
ATPAF1-214ENST00000576409 ZPBPQ9BS86 351 aa15.18■□□□□ 0.02
ATPAF1-214ENST00000576409 PRDM14Q9GZV8 571 aa15.18■□□□□ 0.02
ATPAF1-214ENST00000576409 DENND4CQ5VZ89 1909 aa15.18■□□□□ 0.02
ATPAF1-214ENST00000576409 TRAV17A0A0B4J275 112 aa15.18■□□□□ 0.02
ATPAF1-214ENST00000576409 C1QTNF9P0C862 333 aa15.18■□□□□ 0.02
ATPAF1-214ENST00000576409 RPL23P62829 140 aaKnown RBP15.18■□□□□ 0.02
ATPAF1-214ENST00000576409 ZNF441Q8N8Z8 693 aa15.18■□□□□ 0.02
ATPAF1-214ENST00000576409 SIGLEC12Q96PQ1 595 aa15.18■□□□□ 0.02
ATPAF1-214ENST00000576409 HIST1H2BLQ99880 126 aa15.18■□□□□ 0.02
ATPAF1-214ENST00000576409 QTRT1Q9BXR0 403 aaKnown RBP15.18■□□□□ 0.02
ATPAF1-214ENST00000576409 ZFHX2Q9C0A1 2572 aaPredicted RBP15.18■□□□□ 0.02
ATPAF1-214ENST00000576409 GATA2P23769 480 aaPredicted RBP15.17■□□□□ 0.02
ATPAF1-214ENST00000576409 CSN1S1P47710 185 aa15.17■□□□□ 0.02
ATPAF1-214ENST00000576409 HERPUD1Q15011 391 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms