RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 IL22RA2Q969J5 263 aa13.32□□□□□ -0.28
ERCC4-208ENST00000576348 FLYWCH2Q96CP2 140 aaKnown RBP13.32□□□□□ -0.28
ERCC4-208ENST00000576348 RRNAD1Q96FB5 475 aaKnown RBP13.32□□□□□ -0.28
ERCC4-208ENST00000576348 MGAT4CQ9UBM8 478 aa13.32□□□□□ -0.28
ERCC4-208ENST00000576348 FAM25EA8MYX2 175 aa13.31□□□□□ -0.28
ERCC4-208ENST00000576348 GOSR2O14653 212 aa13.31□□□□□ -0.28
ERCC4-208ENST00000576348 SHOXO15266 292 aa13.31□□□□□ -0.28
ERCC4-208ENST00000576348 S1PR2O95136 353 aa13.31□□□□□ -0.28
ERCC4-208ENST00000576348 CDS2O95674 445 aa13.31□□□□□ -0.28
ERCC4-208ENST00000576348 HRASP01112 189 aa13.31□□□□□ -0.28
ERCC4-208ENST00000576348 HOXB5P09067 269 aa13.31□□□□□ -0.28
ERCC4-208ENST00000576348 RRAS2P62070 204 aaPredicted RBP13.31□□□□□ -0.28
ERCC4-208ENST00000576348 RPS16P62249 146 aaKnown RBP13.31□□□□□ -0.28
ERCC4-208ENST00000576348 FAM120AOSQ5T036 256 aa13.31□□□□□ -0.28
ERCC4-208ENST00000576348 SELENOHQ8IZQ5 122 aaKnown RBP13.31□□□□□ -0.28
ERCC4-208ENST00000576348 OR4C13Q8NGP0 309 aa13.31□□□□□ -0.28
ERCC4-208ENST00000576348 TMEM56Q96MV1 263 aa13.31□□□□□ -0.28
ERCC4-208ENST00000576348 AIFM2Q9BRQ8 373 aa13.31□□□□□ -0.28
ERCC4-208ENST00000576348 PLEKHA2Q9HB19 425 aa13.31□□□□□ -0.28
ERCC4-208ENST00000576348 COMMD9Q9P000 198 aa13.31□□□□□ -0.28
ERCC4-208ENST00000576348 TMEM56-RWDD3S4R434 201 aa13.31□□□□□ -0.28
ERCC4-208ENST00000576348 DUXBA0A1W2PPF3 345 aa13.3□□□□□ -0.28
ERCC4-208ENST00000576348 C5orf51A6NDU8 294 aa13.3□□□□□ -0.28
ERCC4-208ENST00000576348 PAX6P26367 422 aa13.3□□□□□ -0.28
ERCC4-208ENST00000576348 CD1BP29016 333 aa13.3□□□□□ -0.28
ERCC4-208ENST00000576348 KRTAP1-1Q07627 177 aa13.3□□□□□ -0.28
ERCC4-208ENST00000576348 ZNF585BQ52M93 769 aa13.3□□□□□ -0.28
ERCC4-208ENST00000576348 SLC35G3Q8N808 338 aa13.3□□□□□ -0.28
ERCC4-208ENST00000576348 DMBX1Q8NFW5 382 aa13.3□□□□□ -0.28
ERCC4-208ENST00000576348 ZDHHC16Q969W1 377 aa13.3□□□□□ -0.28
ERCC4-208ENST00000576348 R3HDM4Q96D70 268 aa13.3□□□□□ -0.28
ERCC4-208ENST00000576348 HARBI1Q96MB7 349 aa13.3□□□□□ -0.28
ERCC4-208ENST00000576348 MYO9AB2RTY4 2548 aa13.3□□□□□ -0.28
ERCC4-208ENST00000576348 CR1P17927 2039 aa13.29□□□□□ -0.28
ERCC4-208ENST00000576348 C13orf42A0A1B0GVH6 325 aa13.29□□□□□ -0.28
ERCC4-208ENST00000576348 VENTXO95231 258 aa13.29□□□□□ -0.28
ERCC4-208ENST00000576348 KRASP01116 189 aa13.29□□□□□ -0.28
ERCC4-208ENST00000576348 FAM106CPP0CH98 169 aa13.29□□□□□ -0.28
ERCC4-208ENST00000576348 NQO2P16083 231 aa13.29□□□□□ -0.28
ERCC4-208ENST00000576348 BCAP31P51572 246 aa13.29□□□□□ -0.28
ERCC4-208ENST00000576348 FCN2Q15485 313 aa13.29□□□□□ -0.28
ERCC4-208ENST00000576348 THOC7Q6I9Y2 204 aaKnown RBP13.29□□□□□ -0.28
ERCC4-208ENST00000576348 CLEC9AQ6UXN8 241 aa13.29□□□□□ -0.28
ERCC4-208ENST00000576348 GSG1LQ6UXU4 331 aa13.29□□□□□ -0.28
ERCC4-208ENST00000576348 IL17RELQ6ZVW7 336 aa13.29□□□□□ -0.28
ERCC4-208ENST00000576348 LYZL2Q7Z4W2 148 aa13.29□□□□□ -0.28
ERCC4-208ENST00000576348 DYNAPQ8N1N2 210 aa13.29□□□□□ -0.28
ERCC4-208ENST00000576348 LRTM2Q8N967 370 aa13.29□□□□□ -0.28
ERCC4-208ENST00000576348 OR2T10Q8NGZ9 312 aa13.29□□□□□ -0.28
ERCC4-208ENST00000576348 LHFPL5Q8TAF8 219 aa13.29□□□□□ -0.28
ERCC4-208ENST00000576348 OSR1Q8TAX0 266 aaPredicted RBP13.29□□□□□ -0.28
ERCC4-208ENST00000576348 TSNAXQ99598 290 aaKnown RBP13.29□□□□□ -0.28
ERCC4-208ENST00000576348 PDCD10Q9BUL8 212 aa13.29□□□□□ -0.28
ERCC4-208ENST00000576348 TMUB1Q9BVT8 246 aa13.29□□□□□ -0.28
ERCC4-208ENST00000576348 RAB18Q9NP72 206 aa13.29□□□□□ -0.28
ERCC4-208ENST00000576348 FLNAP21333 2647 aaKnown RBP13.29□□□□□ -0.28
ERCC4-208ENST00000576348 NBPF19A0A087WUL8 3843 aa13.29□□□□□ -0.28
ERCC4-208ENST00000576348 WNK2Q9Y3S1 2297 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 HMX3A6NHT5 357 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 CCSO14618 274 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 LY6G6DO95868 133 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 MOSP00540 346 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 FSHBP01225 129 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 IGKV1D-33P01593 117 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 IGKV1-33P01594 117 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 SNRNP70P08621 437 aaKnown RBP13.28□□□□□ -0.28
ERCC4-208ENST00000576348 VDAC1P21796 283 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 G6PCP35575 357 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 BRWD1-AS2P59051 145 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 SCGB2A2Q13296 93 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 HNF4GQ14541 408 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 LRRC75BQ2VPJ9 315 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 VMA21Q3ZAQ7 101 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 TMEM177Q53S58 311 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 GGNBP1Q5YKI7 109 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 SSX9Q7RTT3 188 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 H2BFWTQ7Z2G1 175 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 CADM3Q8N126 398 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 C22orf15Q8WYQ4 148 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 SPIN2AQ99865 258 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 SPIN2BQ9BPZ2 258 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 TMED3Q9Y3Q3 217 aa13.28□□□□□ -0.28
ERCC4-208ENST00000576348 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.28□□□□□ -0.28
ERCC4-208ENST00000576348 MARCH11A6NNE9 402 aa13.27□□□□□ -0.29
ERCC4-208ENST00000576348 RBMXL2O75526 392 aaKnown RBP13.27□□□□□ -0.29
ERCC4-208ENST00000576348 ADAP1O75689 374 aa13.27□□□□□ -0.29
ERCC4-208ENST00000576348 IGKV1-16P04430 117 aa13.27□□□□□ -0.29
ERCC4-208ENST00000576348 LGALS7P47929 136 aa13.27□□□□□ -0.29
ERCC4-208ENST00000576348 CFHR4Q92496 578 aa13.27□□□□□ -0.29
ERCC4-208ENST00000576348 AJUBAQ96IF1 538 aa13.27□□□□□ -0.29
ERCC4-208ENST00000576348 SMR3AQ99954 134 aa13.27□□□□□ -0.29
ERCC4-208ENST00000576348 BTBD17A6NE02 478 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 SIX6O95475 246 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 IGKV1-39P01597 117 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 IGKV1D-39P04432 117 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 TRAPPC2P0DI81 140 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 TRAPPC2BP0DI82 140 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 SULT1A3P0DMM9 295 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 SULT1A4P0DMN0 295 aa13.26□□□□□ -0.29
ERCC4-208ENST00000576348 TMEM11P17152 192 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms