RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 RBP4P02753 201 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 RIGQ13278 110 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 TMEM97Q5BJF2 176 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 SHISA5Q8N114 240 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 CRIPAKQ8N1N5 446 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 AAMDCQ9H7C9 122 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 SEBOXQ9HB31 216 aaPredicted RBP11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 PPP1R14DQ9NXH3 145 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 HS3ST3B1Q9Y662 390 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 ZSWIM8A7E2V4 1837 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 SLC17A3O00476 420 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 ZNF207O43670 478 aaKnown RBP11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 LEPROTL1O95214 131 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 MEOX1P50221 254 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 SSPNQ14714 243 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 CRISPLD2Q9H0B8 497 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 MARCH11A6NNE9 402 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 A8MWL6 223 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 RTN4RL2Q86UN3 420 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 IL36BQ9NZH7 164 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 C3AR1Q16581 482 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 HES3Q5TGS1 186 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 OR8A1Q8NGG7 326 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 MBD3L1Q8WWY6 194 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 PKIBQ9C010 78 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 RFNGQ9Y644 331 aa11.2□□□□□ -0.62
PCDHGB3-201ENST00000576222 RALGAPA1Q6GYQ0 2036 aa11.19□□□□□ -0.62
PCDHGB3-201ENST00000576222 IGHV5-10-1A0A0J9YXX1 117 aa11.19□□□□□ -0.62
PCDHGB3-201ENST00000576222 hCG_38984A0A1B0GV85 526 aa11.19□□□□□ -0.62
PCDHGB3-201ENST00000576222 TMEM210A6NLX4 147 aa11.19□□□□□ -0.62
PCDHGB3-201ENST00000576222 SERF1AO75920 110 aa11.19□□□□□ -0.62
PCDHGB3-201ENST00000576222 CCL4P13236 92 aa11.19□□□□□ -0.62
PCDHGB3-201ENST00000576222 STXBP6Q8NFX7 210 aa11.19□□□□□ -0.62
PCDHGB3-201ENST00000576222 PAXXQ9BUH6 204 aa11.19□□□□□ -0.62
PCDHGB3-201ENST00000576222 PRSS1P07477 247 aa11.19□□□□□ -0.62
PCDHGB3-201ENST00000576222 ATP5G3P48201 142 aa11.19□□□□□ -0.62
PCDHGB3-201ENST00000576222 MDP1Q86V88 176 aa11.19□□□□□ -0.62
PCDHGB3-201ENST00000576222 ZPBPQ9BS86 351 aa11.19□□□□□ -0.62
PCDHGB3-201ENST00000576222 WDR54Q9H977 334 aa11.19□□□□□ -0.62
PCDHGB3-201ENST00000576222 IGKV1D-13A0A0B4J2D9 117 aa11.19□□□□□ -0.62
PCDHGB3-201ENST00000576222 IGKV1-13P0DP09 117 aa11.19□□□□□ -0.62
PCDHGB3-201ENST00000576222 GCHFRP30047 84 aa11.19□□□□□ -0.62
PCDHGB3-201ENST00000576222 ESPL1Q14674 2120 aa11.19□□□□□ -0.62
PCDHGB3-201ENST00000576222 QRFPP83859 136 aa11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 VSTM2AQ8TAG5 236 aa11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 LYZL4Q96KX0 146 aa11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 LAMTOR2Q9Y2Q5 125 aa11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 IGHV2-5P01817 119 aa11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 CFPP27918 469 aa11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 OTX1P32242 354 aaPredicted RBP11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 MAGEA5P43359 124 aa11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 TFF3Q07654 80 aa11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 CSRP2Q16527 193 aa11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 DNLZQ5SXM8 178 aa11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 DNM1P46Q6ZS02 220 aa11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 ZNF664Q8N3J9 261 aa11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 FLYWCH2Q96CP2 140 aaKnown RBP11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 DHRS13Q6UX07 377 aa11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 TCF23Q7RTU1 214 aa11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 OR8B3Q8NGG8 313 aa11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 VOPP1Q96AW1 172 aa11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 OR51B2Q9Y5P1 312 aa11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 TRAV1-1A0A0B4J248 108 aa11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 hADV38S2A0JD32 116 aa11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 UQCRFS1P47985 274 aa11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 MRPL37Q9BZE1 423 aaKnown RBP11.18□□□□□ -0.62
PCDHGB3-201ENST00000576222 ODAMA1E959 279 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 C1QTNF9BB2RNN3 333 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 DLEU1O43261 78 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 EFEMP2O95967 443 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 CA2P00918 260 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 LYZP61626 148 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 CENPWQ5EE01 88 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 RNF144BQ7Z419 303 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 DOLPP1Q86YN1 238 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 ABHD12Q8N2K0 398 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 KLHDC3Q9BQ90 382 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 SRXN1Q9BYN0 137 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 SYNGR3O43761 229 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 OR2J3O76001 311 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 PERPQ96FX8 193 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 DUSP15Q9H1R2 295 aaPredicted RBP11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 TCFL5Q9UL49 500 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 FBLL1A6NHQ2 334 aaKnown RBP11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 A6NNC1 897 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 CLEC3BP05452 202 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 CEACAM1P13688 526 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 MAS1LP35410 378 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 VSIRQ9H7M9 311 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 C1QTNF9P0C862 333 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 ZNF83P51522 516 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 C1orf194Q5T5A4 169 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 FBXW9Q5XUX1 488 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 MOB3BQ86TA1 216 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 GBGT1Q8N5D6 347 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 DEFB123Q8N688 67 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 OR51G1Q8NGK1 321 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 ZDHHC16Q969W1 377 aa11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 TNS1Q9HBL0 1735 aaKnown RBP11.17□□□□□ -0.62
PCDHGB3-201ENST00000576222 BRWD3Q6RI45 1802 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms