RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 TMEM177Q53S58 311 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 OR4A47Q6IF82 309 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 SLC38A6Q8IZM9 456 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 TTC9CQ8N5M4 171 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 PGLYRP3Q96LB9 341 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 DERL3Q96Q80 235 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 TM2D1Q9BX74 207 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 C12orf4Q9NQ89 552 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 RDH8Q9NYR8 311 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 DIMT1Q9UNQ2 313 aaKnown RBP6.73□□□□□ -1.33
SMG6-218ENST00000575454 VPS13DQ5THJ4 4388 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 KIR2DL5BA0A0G2JN68 375 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 KIR2DL5BA0A0G2JPC4 375 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 DYNC1I1O14576 645 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 RBMXL2O75526 392 aaKnown RBP6.72□□□□□ -1.33
SMG6-218ENST00000575454 DEDDO75618 318 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 ATP5HO75947 161 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 OR2C1O95371 312 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 CD1AP06126 327 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 GSTT2P0CG29 244 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 GSTT2BP0CG30 244 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 APELAP0DMC3 54 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 SRMP19623 302 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 HTR2CP28335 458 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 TCTAP57738 103 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 LINC00205P59089 165 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 TNXAQ16473 311 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 C15orf32Q32M92 178 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 TM4SF20Q53R12 229 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 RBPMS2Q6ZRY4 209 aaKnown RBP6.72□□□□□ -1.33
SMG6-218ENST00000575454 TMEM61Q8N0U2 210 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 KIR2DL5AQ8N109 375 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 STPG3Q8N7X2 389 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 OR1L6Q8NGR2 347 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 KIR2DL5BQ8NHK3 375 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 PHLDA1Q8WV24 401 aaPredicted RBP6.72□□□□□ -1.33
SMG6-218ENST00000575454 SRSF12Q8WXF0 261 aaKnown RBP6.72□□□□□ -1.33
SMG6-218ENST00000575454 MARC2Q969Z3 335 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 ADTRPQ96IZ2 230 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 URM1Q9BTM9 101 aaKnown RBP6.72□□□□□ -1.33
SMG6-218ENST00000575454 MFFQ9GZY8 342 aa6.72□□□□□ -1.33
SMG6-218ENST00000575454 PKHD1P08F94 4074 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 ZNF320A2RRD8 509 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 SRRM4A7MD48 611 aaKnown RBP6.71□□□□□ -1.34
SMG6-218ENST00000575454 TRDCB7Z8K6 153 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 DHFRP00374 187 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 LALBAP00709 142 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 IFNA4P05014 189 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 SCTP09683 121 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 C1orf100Q5SVJ3 147 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 ZFP1Q6P2D0 407 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 C10orf67Q8IYJ2 551 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 OR2C3Q8N628 320 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 UXS1Q8NBZ7 420 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 OSR1Q8TAX0 266 aaPredicted RBP6.71□□□□□ -1.34
SMG6-218ENST00000575454 APH1BQ8WW43 257 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 PYDC1Q8WXC3 89 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 ACOT12Q8WYK0 555 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 PHYHIPQ92561 330 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 RNF183Q96D59 192 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 TMEM80Q96HE8 168 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 CYYR1Q96J86 154 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 CENPOQ9BU64 300 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 C9orf16Q9BUW7 83 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 Q9N2K0 584 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 CLEC2DQ9UHP7 191 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 AK3Q9UIJ7 227 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 HSF4Q9ULV5 492 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 ZNF257Q9Y2Q1 563 aa6.71□□□□□ -1.34
SMG6-218ENST00000575454 DPPA5A6NC42 116 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 A8MWP6 167 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 PPP5D1E7EU14 171 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 OR2J3O76001 311 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 SCAF4O95104 1147 aaKnown RBP6.7□□□□□ -1.34
SMG6-218ENST00000575454 DIRAS3O95661 229 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 HLA-AP01891 365 aaKnown RBP6.7□□□□□ -1.34
SMG6-218ENST00000575454 PRH1P02810 166 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 ARL3P36405 182 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 RANBP1P43487 201 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 MRPS15P82914 257 aaKnown RBP6.7□□□□□ -1.34
SMG6-218ENST00000575454 EWSR1Q01844 656 aaKnown RBP eCLIP6.7□□□□□ -1.34
SMG6-218ENST00000575454 ZNF45Q02386 682 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 MED22Q15528 200 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 SMN1Q16637 294 aaKnown RBP6.7□□□□□ -1.34
SMG6-218ENST00000575454 DEFB135Q30KP9 77 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 OR10K2Q6IF99 312 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 MMD2Q8IY49 270 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 MS4A15Q8N5U1 240 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 ZFP41Q8N8Y5 198 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 ZNF485Q8NCK3 441 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 ZNF555Q8NEP9 628 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 OR4A4PQ8NGN8 299 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 GGHQ92820 318 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 NICN1Q9BSH3 213 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 OR2D2Q9H210 308 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 SDHAF2Q9NX18 166 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 MLXQ9UH92 298 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 FBXL7Q9UJT9 491 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 DMRT1Q9Y5R6 373 aa6.7□□□□□ -1.34
SMG6-218ENST00000575454 TMEM213A2RRL7 107 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms