RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 DDB2Q92466 427 aa10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 RITA1Q96K30 269 aa10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 CITED1Q99966 193 aa10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 SOSTQ9BQB4 213 aa10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 AIFM2Q9BRQ8 373 aa10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 METTL1Q9UBP6 276 aaKnown RBP10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 TET2Q6N021 2002 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 TENM1Q9UKZ4 2725 aa10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 DISC1C4P0D8 188 aa10.11□□□□□ -0.79
TRAPPC1-206ENST00000573989 M0QYG6 137 aa10.11□□□□□ -0.79
TRAPPC1-206ENST00000573989 GPR31O00270 319 aa10.11□□□□□ -0.79
TRAPPC1-206ENST00000573989 FCGR3BO75015 233 aa10.11□□□□□ -0.79
TRAPPC1-206ENST00000573989 CRYZL1O95825 349 aa10.11□□□□□ -0.79
TRAPPC1-206ENST00000573989 CD74P04233 296 aa10.11□□□□□ -0.79
TRAPPC1-206ENST00000573989 AKAIN1P0CW23 69 aa10.11□□□□□ -0.79
TRAPPC1-206ENST00000573989 GNRHRP30968 328 aa10.11□□□□□ -0.79
TRAPPC1-206ENST00000573989 AP3S2P59780 193 aa10.11□□□□□ -0.79
TRAPPC1-206ENST00000573989 TMEM95Q3KNT9 176 aa10.11□□□□□ -0.79
TRAPPC1-206ENST00000573989 VMA21Q3ZAQ7 101 aa10.11□□□□□ -0.79
TRAPPC1-206ENST00000573989 FOXB2Q5VYV0 432 aa10.11□□□□□ -0.79
TRAPPC1-206ENST00000573989 ZNF818PQ6ZRF7 136 aa10.11□□□□□ -0.79
TRAPPC1-206ENST00000573989 CCDC190Q86UF4 302 aa10.11□□□□□ -0.79
TRAPPC1-206ENST00000573989 SLC38A6Q8IZM9 456 aa10.11□□□□□ -0.79
TRAPPC1-206ENST00000573989 OR4X2Q8NGF9 303 aa10.11□□□□□ -0.79
TRAPPC1-206ENST00000573989 CD300LFQ8TDQ1 290 aa10.11□□□□□ -0.79
TRAPPC1-206ENST00000573989 WNT10AQ9GZT5 417 aa10.11□□□□□ -0.79
TRAPPC1-206ENST00000573989 FBXL15Q9H469 300 aa10.11□□□□□ -0.79
TRAPPC1-206ENST00000573989 BATF3Q9NR55 127 aa10.11□□□□□ -0.79
TRAPPC1-206ENST00000573989 PSMB11A5LHX3 300 aa10.1□□□□□ -0.79
TRAPPC1-206ENST00000573989 TNFSF12O43508 249 aa10.1□□□□□ -0.79
TRAPPC1-206ENST00000573989 CREBL2O60519 120 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC1-206ENST00000573989 FBXO24O75426 580 aa10.1□□□□□ -0.79
TRAPPC1-206ENST00000573989 FAUP35544 74 aaKnown RBP10.1□□□□□ -0.79
TRAPPC1-206ENST00000573989 ETV6P41212 452 aa10.1□□□□□ -0.79
TRAPPC1-206ENST00000573989 ECI1P42126 302 aa10.1□□□□□ -0.79
TRAPPC1-206ENST00000573989 UCP3P55916 312 aa10.1□□□□□ -0.79
TRAPPC1-206ENST00000573989 PSG5Q15238 335 aa10.1□□□□□ -0.79
TRAPPC1-206ENST00000573989 AADACL3Q5VUY0 350 aa10.1□□□□□ -0.79
TRAPPC1-206ENST00000573989 Q8N402 240 aa10.1□□□□□ -0.79
TRAPPC1-206ENST00000573989 STPG2Q8N412 459 aa10.1□□□□□ -0.79
TRAPPC1-206ENST00000573989 COMMD1Q8N668 190 aa10.1□□□□□ -0.79
TRAPPC1-206ENST00000573989 TCTEX1D1Q8N7M0 179 aa10.1□□□□□ -0.79
TRAPPC1-206ENST00000573989 OR5AU1Q8NGC0 362 aa10.1□□□□□ -0.79
TRAPPC1-206ENST00000573989 OR6Q1Q8NGQ2 317 aa10.1□□□□□ -0.79
TRAPPC1-206ENST00000573989 SGMS2Q8NHU3 365 aa10.1□□□□□ -0.79
TRAPPC1-206ENST00000573989 THAP7Q9BT49 309 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC1-206ENST00000573989 TINAGL1Q9GZM7 467 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC1-206ENST00000573989 M0QZ24 198 aa10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 RBFOX2O43251 390 aaKnown RBP eCLIP10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 SLC25A17O43808 307 aa10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 HRASP01112 189 aa10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 PGAM2P15259 253 aa10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 VDAC1P21796 283 aa10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 RPL30P62888 115 aaKnown RBP10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 TMEM267Q0VDI3 215 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 EIF4EBP1Q13541 118 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 SCGB2B2Q4G0G5 96 aa10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 OR2B11Q5JQS5 317 aa10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 PPP1R27Q86WC6 154 aa10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 TEX45Q8NA69 505 aa10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 TERB2Q8NHR7 220 aa10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 VSTM2AQ8TAG5 236 aa10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 ZFAND1Q8TCF1 268 aa10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 RBMXL1Q96E39 390 aaKnown RBP10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 ZNF486Q96H40 463 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 PRRT1Q99946 306 aa10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 FXYD6Q9H0Q3 95 aa10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 OR51J1Q9H342 316 aa10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 SCP2D1Q9UJQ7 156 aa10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 ZNF580Q9UK33 172 aa10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 V9GYH0 126 aa10.09□□□□□ -0.79
TRAPPC1-206ENST00000573989 ANKRD20A5PA0PJZ0 165 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 A6NHS1 94 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 PLXNB1O43157 2135 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 CNIH1O95406 144 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 HPRT1P00492 218 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 OPN1MWP04001 364 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 IGF1P05019 195 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 OPN1MW2P0DN77 364 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 OPN1MW3P0DN78 364 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 INPP1P49441 399 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 KRTAP10-3P60369 221 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 UBE2KP61086 200 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 SRSF4Q08170 494 aaKnown RBP10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 ZNF562Q6V9R5 426 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 SPAG16Q8N0X2 631 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 TOMM5Q8N4H5 51 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 OR51H1Q8NH63 302 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 ABHD5Q8WTS1 349 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 DEDD2Q8WXF8 326 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 NOL4LQ96MY1 436 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 HSPB9Q9BQS6 159 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 RSRP1Q9BUV0 290 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 PARP11Q9NR21 331 aa10.08□□□□□ -0.8
TRAPPC1-206ENST00000573989 IGHV7-81A0A0B4J1V7 117 aa10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 PGLYRP1O75594 196 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 ACTL6BO94805 426 aa10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 CA2P00918 260 aa10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 IGLV2-23P01705 113 aa10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 RLN1P04808 185 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms