RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 EGFEM1PQ0D2K5 195 aa13.81□□□□□ -0.2
CTDNEP1-207ENST00000572043 OR2B11Q5JQS5 317 aa13.81□□□□□ -0.2
CTDNEP1-207ENST00000572043 ZNF355PQ9NSJ1 428 aa13.81□□□□□ -0.2
CTDNEP1-207ENST00000572043 SPATA2Q9UM82 520 aa13.81□□□□□ -0.2
CTDNEP1-207ENST00000572043 OR2W1Q9Y3N9 320 aa13.81□□□□□ -0.2
CTDNEP1-207ENST00000572043 NOTCH1P46531 2555 aa13.81□□□□□ -0.2
CTDNEP1-207ENST00000572043 MEIS3P1A6NDR6 274 aa13.8□□□□□ -0.2
CTDNEP1-207ENST00000572043 SEC14L6B5MCN3 397 aa13.8□□□□□ -0.2
CTDNEP1-207ENST00000572043 I3L521 148 aa13.8□□□□□ -0.2
CTDNEP1-207ENST00000572043 CRYGBP07316 175 aa13.8□□□□□ -0.2
CTDNEP1-207ENST00000572043 RPS19P39019 145 aaKnown RBP13.8□□□□□ -0.2
CTDNEP1-207ENST00000572043 LGALS7P47929 136 aa13.8□□□□□ -0.2
CTDNEP1-207ENST00000572043 TPPP2P59282 170 aa13.8□□□□□ -0.2
CTDNEP1-207ENST00000572043 ARPC4P59998 168 aa13.8□□□□□ -0.2
CTDNEP1-207ENST00000572043 FHL3Q13643 280 aa13.8□□□□□ -0.2
CTDNEP1-207ENST00000572043 ASPHD1Q5U4P2 390 aa13.8□□□□□ -0.2
CTDNEP1-207ENST00000572043 IDO2Q6ZQW0 420 aa13.8□□□□□ -0.2
CTDNEP1-207ENST00000572043 ZNF645Q8N7E2 425 aa13.8□□□□□ -0.2
CTDNEP1-207ENST00000572043 TCTEX1D1Q8N7M0 179 aa13.8□□□□□ -0.2
CTDNEP1-207ENST00000572043 OR5T1Q8NG75 326 aa13.8□□□□□ -0.2
CTDNEP1-207ENST00000572043 DDB2Q92466 427 aa13.8□□□□□ -0.2
CTDNEP1-207ENST00000572043 ADTRPQ96IZ2 230 aa13.8□□□□□ -0.2
CTDNEP1-207ENST00000572043 DCUN1D5Q9BTE7 237 aa13.8□□□□□ -0.2
CTDNEP1-207ENST00000572043 DIABLOQ9NR28 239 aa13.8□□□□□ -0.2
CTDNEP1-207ENST00000572043 HLA-DQB1P01920 261 aa13.79□□□□□ -0.2
CTDNEP1-207ENST00000572043 APELAP0DMC3 54 aa13.79□□□□□ -0.2
CTDNEP1-207ENST00000572043 RRASP10301 218 aa13.79□□□□□ -0.2
CTDNEP1-207ENST00000572043 SSBP2P81877 361 aaPredicted RBP13.79□□□□□ -0.2
CTDNEP1-207ENST00000572043 TAGLNQ01995 201 aaKnown RBP13.79□□□□□ -0.2
CTDNEP1-207ENST00000572043 ZNF616Q08AN1 781 aa13.79□□□□□ -0.2
CTDNEP1-207ENST00000572043 AKIRIN2Q53H80 203 aa13.79□□□□□ -0.2
CTDNEP1-207ENST00000572043 TMEM177Q53S58 311 aa13.79□□□□□ -0.2
CTDNEP1-207ENST00000572043 BEST4Q8NFU0 473 aa13.79□□□□□ -0.2
CTDNEP1-207ENST00000572043 AUNIPQ9H7T9 357 aa13.79□□□□□ -0.2
CTDNEP1-207ENST00000572043 RBMX2Q9Y388 322 aaKnown RBP13.79□□□□□ -0.2
CTDNEP1-207ENST00000572043 FCGR3BO75015 233 aa13.78□□□□□ -0.2
CTDNEP1-207ENST00000572043 IGLV2-14P01704 120 aa13.78□□□□□ -0.2
CTDNEP1-207ENST00000572043 OR8U8P0C7N1 319 aa13.78□□□□□ -0.2
CTDNEP1-207ENST00000572043 CD40LGP29965 261 aa13.78□□□□□ -0.2
CTDNEP1-207ENST00000572043 RPL30P62888 115 aaKnown RBP13.78□□□□□ -0.2
CTDNEP1-207ENST00000572043 VMA21Q3ZAQ7 101 aa13.78□□□□□ -0.2
CTDNEP1-207ENST00000572043 KCTD9Q7L273 389 aa13.78□□□□□ -0.2
CTDNEP1-207ENST00000572043 HOGA1Q86XE5 327 aa13.78□□□□□ -0.2
CTDNEP1-207ENST00000572043 GPHA2Q96T91 129 aa13.78□□□□□ -0.2
CTDNEP1-207ENST00000572043 PRKDCP78527 4128 aaKnown RBP13.77□□□□□ -0.2
CTDNEP1-207ENST00000572043 A0A0A6YYH2 397 aa13.77□□□□□ -0.21
CTDNEP1-207ENST00000572043 A6NJ64 397 aa13.77□□□□□ -0.21
CTDNEP1-207ENST00000572043 TRGV3P03979 118 aa13.77□□□□□ -0.21
CTDNEP1-207ENST00000572043 LGALS1P09382 135 aaKnown RBP13.77□□□□□ -0.21
CTDNEP1-207ENST00000572043 AADACP22760 399 aa13.77□□□□□ -0.21
CTDNEP1-207ENST00000572043 FCGR2CP31995 323 aa13.77□□□□□ -0.21
CTDNEP1-207ENST00000572043 SLURP1P55000 103 aa13.77□□□□□ -0.21
CTDNEP1-207ENST00000572043 NCS1P62166 190 aa13.77□□□□□ -0.21
CTDNEP1-207ENST00000572043 DGCR2P98153 550 aa13.77□□□□□ -0.21
CTDNEP1-207ENST00000572043 RUNX1Q01196 453 aa13.77□□□□□ -0.21
CTDNEP1-207ENST00000572043 DEFA5Q01523 94 aa13.77□□□□□ -0.21
CTDNEP1-207ENST00000572043 TNXAQ16473 311 aa13.77□□□□□ -0.21
CTDNEP1-207ENST00000572043 C9orf66Q5T8R8 295 aa13.77□□□□□ -0.21
CTDNEP1-207ENST00000572043 PYHIN1Q6K0P9 492 aa13.77□□□□□ -0.21
CTDNEP1-207ENST00000572043 CROCCP3Q8IVE0 287 aa13.77□□□□□ -0.21
CTDNEP1-207ENST00000572043 SAMD12Q8N8I0 201 aa13.77□□□□□ -0.21
CTDNEP1-207ENST00000572043 TCTEX1D2Q8WW35 142 aa13.77□□□□□ -0.21
CTDNEP1-207ENST00000572043 DCUN1D4Q92564 292 aa13.77□□□□□ -0.21
CTDNEP1-207ENST00000572043 PHB2Q99623 299 aa13.77□□□□□ -0.21
CTDNEP1-207ENST00000572043 TAS2R8Q9NYW2 309 aa13.77□□□□□ -0.21
CTDNEP1-207ENST00000572043 IGHV4OR15-8A0A075B7B6 117 aa13.76□□□□□ -0.21
CTDNEP1-207ENST00000572043 A0A087WW49 117 aa13.76□□□□□ -0.21
CTDNEP1-207ENST00000572043 TNFSF12O43508 249 aa13.76□□□□□ -0.21
CTDNEP1-207ENST00000572043 ECI1P42126 302 aa13.76□□□□□ -0.21
CTDNEP1-207ENST00000572043 UBE2KP61086 200 aa13.76□□□□□ -0.21
CTDNEP1-207ENST00000572043 UBE2NLQ5JXB2 153 aa13.76□□□□□ -0.21
CTDNEP1-207ENST00000572043 SECTM1Q8WVN6 248 aa13.76□□□□□ -0.21
CTDNEP1-207ENST00000572043 ACOT12Q8WYK0 555 aa13.76□□□□□ -0.21
CTDNEP1-207ENST00000572043 S100A16Q96FQ6 103 aaKnown RBP13.76□□□□□ -0.21
CTDNEP1-207ENST00000572043 FUNDC2Q9BWH2 189 aa13.76□□□□□ -0.21
CTDNEP1-207ENST00000572043 PRELID3BQ9Y3B1 194 aa13.76□□□□□ -0.21
CTDNEP1-207ENST00000572043 MSGN1A6NI15 193 aa13.75□□□□□ -0.21
CTDNEP1-207ENST00000572043 LINC01619G3V211 115 aa13.75□□□□□ -0.21
CTDNEP1-207ENST00000572043 XRCC3O43542 346 aa13.75□□□□□ -0.21
CTDNEP1-207ENST00000572043 SAA1P0DJI8 122 aaPredicted RBP13.75□□□□□ -0.21
CTDNEP1-207ENST00000572043 FXYD4P59646 89 aa13.75□□□□□ -0.21
CTDNEP1-207ENST00000572043 VBP1P61758 197 aa13.75□□□□□ -0.21
CTDNEP1-207ENST00000572043 PRSS8Q16651 343 aa13.75□□□□□ -0.21
CTDNEP1-207ENST00000572043 MRGPRG-AS1Q2M3A8 158 aa13.75□□□□□ -0.21
CTDNEP1-207ENST00000572043 VKORC1L1Q8N0U8 176 aa13.75□□□□□ -0.21
CTDNEP1-207ENST00000572043 TEX45Q8NA69 505 aa13.75□□□□□ -0.21
CTDNEP1-207ENST00000572043 POC5Q8NA72 575 aa13.75□□□□□ -0.21
CTDNEP1-207ENST00000572043 OR13F1Q8NGS4 319 aa13.75□□□□□ -0.21
CTDNEP1-207ENST00000572043 OSR1Q8TAX0 266 aaPredicted RBP13.75□□□□□ -0.21
CTDNEP1-207ENST00000572043 SNAPC3Q92966 411 aa13.75□□□□□ -0.21
CTDNEP1-207ENST00000572043 PRR25Q96S07 402 aa13.75□□□□□ -0.21
CTDNEP1-207ENST00000572043 IFT46Q9NQC8 304 aa13.75□□□□□ -0.21
CTDNEP1-207ENST00000572043 CCL28Q9NRJ3 127 aa13.75□□□□□ -0.21
CTDNEP1-207ENST00000572043 SCOCQ9UIL1 159 aa13.75□□□□□ -0.21
CTDNEP1-207ENST00000572043 MRPS7Q9Y2R9 242 aaKnown RBP13.75□□□□□ -0.21
CTDNEP1-207ENST00000572043 OVOL1O14753 267 aa13.74□□□□□ -0.21
CTDNEP1-207ENST00000572043 TMEM127O75204 238 aa13.74□□□□□ -0.21
CTDNEP1-207ENST00000572043 SLC22A5O76082 557 aa13.74□□□□□ -0.21
CTDNEP1-207ENST00000572043 TAS2R20P59543 309 aa13.74□□□□□ -0.21
CTDNEP1-207ENST00000572043 TMEM69Q5SWH9 247 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms