RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 TMEM252Q8N6L7 170 aa15.9■□□□□ 0.14
RPAIN-210ENST00000571613 SMIM8Q96KF7 97 aa15.9■□□□□ 0.14
RPAIN-210ENST00000571613 SSBP3Q9BWW4 388 aaPredicted RBP15.9■□□□□ 0.14
RPAIN-210ENST00000571613 RPS10-NUDT3A0A1W2PQS6 291 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 LINC00862A6NCI5 91 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 APOA2P02652 100 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 S100A1P23297 94 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 UBE2KP61086 200 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 TNFRSF9Q07011 255 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 IZUMO4Q1ZYL8 232 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 STX12Q86Y82 276 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 C11orf42Q8N5U0 333 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 ZNF383Q8NA42 475 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 UBAC2Q8NBM4 344 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 CIB3Q96Q77 187 aaPredicted RBP15.89■□□□□ 0.13
RPAIN-210ENST00000571613 YLPM1P49750 1951 aaKnown RBP15.89■□□□□ 0.13
RPAIN-210ENST00000571613 FAM24AA6NFZ4 105 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 CT45A6P0DMU7 189 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 CT45A5P0DMU8 189 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 CT45A7P0DMV0 189 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 LINC00205P59089 165 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 ERVFRD-1P60508 538 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 ZNF266Q14584 549 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 POU2AF1Q16633 256 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 PCGF1Q9BSM1 259 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 SLC35D1Q9NTN3 355 aa15.89■□□□□ 0.13
RPAIN-210ENST00000571613 LOC105371242A0A075B767 164 aa15.88■□□□□ 0.13
RPAIN-210ENST00000571613 RBMXL2O75526 392 aaKnown RBP15.88■□□□□ 0.13
RPAIN-210ENST00000571613 AARDQ4LEZ3 155 aa15.88■□□□□ 0.13
RPAIN-210ENST00000571613 C1orf229Q6ZS94 237 aaPredicted RBP15.88■□□□□ 0.13
RPAIN-210ENST00000571613 PDZD9Q8IXQ8 264 aa15.88■□□□□ 0.13
RPAIN-210ENST00000571613 M0R1W7 72 aa15.87■□□□□ 0.13
RPAIN-210ENST00000571613 CRYZL1O95825 349 aa15.87■□□□□ 0.13
RPAIN-210ENST00000571613 PAX9P55771 341 aa15.87■□□□□ 0.13
RPAIN-210ENST00000571613 RPL7L1Q6DKI1 246 aaKnown RBP15.87■□□□□ 0.13
RPAIN-210ENST00000571613 BEND2Q8NDZ0 799 aa15.87■□□□□ 0.13
RPAIN-210ENST00000571613 OR52E5Q8NH55 327 aa15.87■□□□□ 0.13
RPAIN-210ENST00000571613 OR4A16Q8NH70 328 aa15.87■□□□□ 0.13
RPAIN-210ENST00000571613 IGFBPL1Q8WX77 278 aa15.87■□□□□ 0.13
RPAIN-210ENST00000571613 CLEC7AQ9BXN2 247 aa15.87■□□□□ 0.13
RPAIN-210ENST00000571613 PSENENQ9NZ42 101 aa15.87■□□□□ 0.13
RPAIN-210ENST00000571613 SCAF4O95104 1147 aaKnown RBP15.86■□□□□ 0.13
RPAIN-210ENST00000571613 NXPH3O95157 252 aa15.86■□□□□ 0.13
RPAIN-210ENST00000571613 PDLIM4P50479 330 aa15.86■□□□□ 0.13
RPAIN-210ENST00000571613 NHLH2Q02577 135 aa15.86■□□□□ 0.13
RPAIN-210ENST00000571613 OSR1Q8TAX0 266 aaPredicted RBP15.86■□□□□ 0.13
RPAIN-210ENST00000571613 CCL19Q99731 98 aa15.86■□□□□ 0.13
RPAIN-210ENST00000571613 AMMECR1Q9Y4X0 333 aaPredicted RBP15.86■□□□□ 0.13
RPAIN-210ENST00000571613 DOCK11Q5JSL3 2073 aa15.86■□□□□ 0.13
RPAIN-210ENST00000571613 IGSF23A1L1A6 192 aa15.86■□□□□ 0.13
RPAIN-210ENST00000571613 TXNL1O43396 289 aa15.86■□□□□ 0.13
RPAIN-210ENST00000571613 TMEM50AO95807 157 aa15.86■□□□□ 0.13
RPAIN-210ENST00000571613 SULT1A1P50225 295 aa15.86■□□□□ 0.13
RPAIN-210ENST00000571613 C1orf122Q6ZSJ8 110 aa15.86■□□□□ 0.13
RPAIN-210ENST00000571613 OR5AN1Q8NGI8 311 aa15.86■□□□□ 0.13
RPAIN-210ENST00000571613 OR13D1Q8NGV5 346 aa15.86■□□□□ 0.13
RPAIN-210ENST00000571613 ST6GALNAC6Q969X2 333 aa15.86■□□□□ 0.13
RPAIN-210ENST00000571613 MED9Q9NWA0 146 aa15.86■□□□□ 0.13
RPAIN-210ENST00000571613 MALRD1Q5VYJ5 2156 aa15.85■□□□□ 0.13
RPAIN-210ENST00000571613 DOPEY1Q5JWR5 2465 aa15.85■□□□□ 0.13
RPAIN-210ENST00000571613 IGHV2-26A0A0B4J1V2 119 aa15.85■□□□□ 0.13
RPAIN-210ENST00000571613 NDUFS7O75251 213 aa15.85■□□□□ 0.13
RPAIN-210ENST00000571613 DFFBO76075 338 aa15.85■□□□□ 0.13
RPAIN-210ENST00000571613 NMBP08949 121 aa15.85■□□□□ 0.13
RPAIN-210ENST00000571613 RNF224P0DH78 156 aa15.85■□□□□ 0.13
RPAIN-210ENST00000571613 MC5RP33032 325 aa15.85■□□□□ 0.13
RPAIN-210ENST00000571613 RAB13P51153 203 aa15.85■□□□□ 0.13
RPAIN-210ENST00000571613 ZNF429Q86V71 674 aa15.85■□□□□ 0.13
RPAIN-210ENST00000571613 TGIF2LXQ8IUE1 241 aa15.85■□□□□ 0.13
RPAIN-210ENST00000571613 RNF141Q8WVD5 230 aa15.85■□□□□ 0.13
RPAIN-210ENST00000571613 RHOVQ96L33 236 aa15.85■□□□□ 0.13
RPAIN-210ENST00000571613 CLCC1Q96S66 551 aa15.85■□□□□ 0.13
RPAIN-210ENST00000571613 SMIM3Q9BZL3 60 aa15.85■□□□□ 0.13
RPAIN-210ENST00000571613 RBKSQ9H477 322 aa15.85■□□□□ 0.13
RPAIN-210ENST00000571613 BARX1Q9HBU1 254 aaPredicted RBP15.85■□□□□ 0.13
RPAIN-210ENST00000571613 TMEM140Q9NV12 185 aa15.85■□□□□ 0.13
RPAIN-210ENST00000571613 SMG1Q96Q15 3661 aaKnown RBP15.85■□□□□ 0.13
RPAIN-210ENST00000571613 CFAP46Q8IYW2 2715 aa15.84■□□□□ 0.13
RPAIN-210ENST00000571613 C22orf46C9J442 243 aa15.84■□□□□ 0.13
RPAIN-210ENST00000571613 SPCS3P61009 180 aa15.84■□□□□ 0.13
RPAIN-210ENST00000571613 PDLIM3Q53GG5 364 aaPredicted RBP15.84■□□□□ 0.13
RPAIN-210ENST00000571613 PDPNQ86YL7 162 aa15.84■□□□□ 0.13
RPAIN-210ENST00000571613 KIR3DL3Q8N743 410 aa15.84■□□□□ 0.13
RPAIN-210ENST00000571613 OR1S2Q8NGQ3 325 aa15.84■□□□□ 0.13
RPAIN-210ENST00000571613 MARVELD3Q96A59 401 aa15.84■□□□□ 0.13
RPAIN-210ENST00000571613 ARV1Q9H2C2 271 aa15.84■□□□□ 0.13
RPAIN-210ENST00000571613 ONECUT1Q9UBC0 465 aa15.84■□□□□ 0.13
RPAIN-210ENST00000571613 H0YJW9 148 aa15.83■□□□□ 0.13
RPAIN-210ENST00000571613 IGLV1-47P01700 117 aa15.83■□□□□ 0.13
RPAIN-210ENST00000571613 OR9G9P0C7N8 305 aa15.83■□□□□ 0.13
RPAIN-210ENST00000571613 COX6B1P14854 86 aa15.83■□□□□ 0.13
RPAIN-210ENST00000571613 HBG1P69891 147 aa15.83■□□□□ 0.13
RPAIN-210ENST00000571613 HBG2P69892 147 aa15.83■□□□□ 0.13
RPAIN-210ENST00000571613 HLA-DRB5Q30154 266 aa15.83■□□□□ 0.13
RPAIN-210ENST00000571613 STPG2Q8N412 459 aa15.83■□□□□ 0.13
RPAIN-210ENST00000571613 DTD1Q8TEA8 209 aa15.83■□□□□ 0.13
RPAIN-210ENST00000571613 MRPL20Q9BYC9 149 aaKnown RBP15.83■□□□□ 0.13
RPAIN-210ENST00000571613 AUP1Q9Y679 476 aa15.83■□□□□ 0.13
RPAIN-210ENST00000571613 ENSAO43768 121 aaKnown RBP15.83■□□□□ 0.12
RPAIN-210ENST00000571613 IFNA17P01571 189 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms