RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 PRR20CP86479 221 aa8.42□□□□□ -1.06
CHMP6-202ENST00000571457 PRR20DP86480 221 aa8.42□□□□□ -1.06
CHMP6-202ENST00000571457 PRR20BP86481 221 aa8.42□□□□□ -1.06
CHMP6-202ENST00000571457 PRR20AP86496 221 aa8.42□□□□□ -1.06
CHMP6-202ENST00000571457 RBMS2Q15434 407 aaKnown RBP8.42□□□□□ -1.06
CHMP6-202ENST00000571457 PRSS8Q16651 343 aa8.42□□□□□ -1.06
CHMP6-202ENST00000571457 RTL8BQ17RB0 113 aa8.42□□□□□ -1.06
CHMP6-202ENST00000571457 ZIK1Q3SY52 487 aaPredicted RBP8.42□□□□□ -1.06
CHMP6-202ENST00000571457 VMA21Q3ZAQ7 101 aa8.42□□□□□ -1.06
CHMP6-202ENST00000571457 TMEM177Q53S58 311 aa8.42□□□□□ -1.06
CHMP6-202ENST00000571457 RBPMS2Q6ZRY4 209 aaKnown RBP8.42□□□□□ -1.06
CHMP6-202ENST00000571457 TEX45Q8NA69 505 aa8.42□□□□□ -1.06
CHMP6-202ENST00000571457 UXS1Q8NBZ7 420 aa8.42□□□□□ -1.06
CHMP6-202ENST00000571457 RHOXF1Q8NHV9 184 aa8.42□□□□□ -1.06
CHMP6-202ENST00000571457 SRSF12Q8WXF0 261 aaKnown RBP8.42□□□□□ -1.06
CHMP6-202ENST00000571457 CACNG8Q8WXS5 425 aa8.42□□□□□ -1.06
CHMP6-202ENST00000571457 MARC2Q969Z3 335 aa8.42□□□□□ -1.06
CHMP6-202ENST00000571457 SLC29A1Q99808 456 aa8.42□□□□□ -1.06
CHMP6-202ENST00000571457 MLXQ9UH92 298 aa8.42□□□□□ -1.06
CHMP6-202ENST00000571457 TRBV5-7A0A0A0MS05 114 aa8.41□□□□□ -1.06
CHMP6-202ENST00000571457 TRBV6-6A0A0A6YYG2 114 aa8.41□□□□□ -1.06
CHMP6-202ENST00000571457 TMEM213A2RRL7 107 aa8.41□□□□□ -1.06
CHMP6-202ENST00000571457 ATP8B1O43520 1251 aa8.41□□□□□ -1.06
CHMP6-202ENST00000571457 RRASP10301 218 aa8.41□□□□□ -1.06
CHMP6-202ENST00000571457 DCKP27707 260 aa8.41□□□□□ -1.06
CHMP6-202ENST00000571457 HLA-DRB3P79483 266 aa8.41□□□□□ -1.06
CHMP6-202ENST00000571457 MED22Q15528 200 aa8.41□□□□□ -1.06
CHMP6-202ENST00000571457 TTC9CQ8N5M4 171 aa8.41□□□□□ -1.06
CHMP6-202ENST00000571457 OR2C3Q8N628 320 aa8.41□□□□□ -1.06
CHMP6-202ENST00000571457 C11orf45Q8TAV5 145 aa8.41□□□□□ -1.06
CHMP6-202ENST00000571457 C2CD4CQ8TF44 421 aa8.41□□□□□ -1.06
CHMP6-202ENST00000571457 ACOT12Q8WYK0 555 aa8.41□□□□□ -1.06
CHMP6-202ENST00000571457 TMEM59Q9BXS4 323 aa8.41□□□□□ -1.06
CHMP6-202ENST00000571457 FGF20Q9NP95 211 aaPredicted RBP8.41□□□□□ -1.06
CHMP6-202ENST00000571457 PLEKHJ1Q9NW61 149 aa8.41□□□□□ -1.06
CHMP6-202ENST00000571457 DMRT1Q9Y5R6 373 aa8.41□□□□□ -1.06
CHMP6-202ENST00000571457 A0A1W2PPK0 400 aa8.4□□□□□ -1.06
CHMP6-202ENST00000571457 DYNC1I1O14576 645 aa8.4□□□□□ -1.06
CHMP6-202ENST00000571457 EI24O14681 340 aa8.4□□□□□ -1.06
CHMP6-202ENST00000571457 OR2J3O76001 311 aa8.4□□□□□ -1.06
CHMP6-202ENST00000571457 GSTT2P0CG29 244 aa8.4□□□□□ -1.06
CHMP6-202ENST00000571457 GSTT2BP0CG30 244 aa8.4□□□□□ -1.06
CHMP6-202ENST00000571457 ARL3P36405 182 aa8.4□□□□□ -1.06
CHMP6-202ENST00000571457 ETV1P50549 477 aa8.4□□□□□ -1.06
CHMP6-202ENST00000571457 UBE2KP61086 200 aa8.4□□□□□ -1.06
CHMP6-202ENST00000571457 RPS11P62280 158 aaKnown RBP eCLIP8.4□□□□□ -1.06
CHMP6-202ENST00000571457 RPS27AP62979 156 aaKnown RBP8.4□□□□□ -1.06
CHMP6-202ENST00000571457 TPBGQ13641 420 aa8.4□□□□□ -1.06
CHMP6-202ENST00000571457 OR2G6Q5TZ20 316 aa8.4□□□□□ -1.06
CHMP6-202ENST00000571457 BTNL8Q6UX41 500 aa8.4□□□□□ -1.06
CHMP6-202ENST00000571457 FBLIM1Q8WUP2 373 aa8.4□□□□□ -1.06
CHMP6-202ENST00000571457 SLC7A6OSQ96CW6 309 aaPredicted RBP8.4□□□□□ -1.06
CHMP6-202ENST00000571457 RDH8Q9NYR8 311 aa8.4□□□□□ -1.06
CHMP6-202ENST00000571457 FBXL7Q9UJT9 491 aa8.4□□□□□ -1.06
CHMP6-202ENST00000571457 SELENOKQ9Y6D0 94 aa8.4□□□□□ -1.06
CHMP6-202ENST00000571457 FAT2Q9NYQ8 4349 aa8.4□□□□□ -1.06
CHMP6-202ENST00000571457 IRGMA1A4Y4 181 aa8.39□□□□□ -1.07
CHMP6-202ENST00000571457 SRRM4A7MD48 611 aaKnown RBP8.39□□□□□ -1.07
CHMP6-202ENST00000571457 SCTP09683 121 aa8.39□□□□□ -1.07
CHMP6-202ENST00000571457 MYL12AP19105 171 aa8.39□□□□□ -1.07
CHMP6-202ENST00000571457 HTR2CP28335 458 aa8.39□□□□□ -1.07
CHMP6-202ENST00000571457 SERPINB10P48595 397 aa8.39□□□□□ -1.07
CHMP6-202ENST00000571457 MRGPRG-AS1Q2M3A8 158 aa8.39□□□□□ -1.07
CHMP6-202ENST00000571457 C1orf146Q5VVC0 180 aa8.39□□□□□ -1.07
CHMP6-202ENST00000571457 TTC23Q5W5X9 447 aa8.39□□□□□ -1.07
CHMP6-202ENST00000571457 SPAG8Q99932 426 aaPredicted RBP8.39□□□□□ -1.07
CHMP6-202ENST00000571457 TM2D1Q9BX74 207 aa8.39□□□□□ -1.07
CHMP6-202ENST00000571457 C12orf4Q9NQ89 552 aa8.39□□□□□ -1.07
CHMP6-202ENST00000571457 FBXL17Q9UF56 701 aa8.39□□□□□ -1.07
CHMP6-202ENST00000571457 ZNF257Q9Y2Q1 563 aa8.39□□□□□ -1.07
CHMP6-202ENST00000571457 DNAH17Q9UFH2 4485 aa8.39□□□□□ -1.07
CHMP6-202ENST00000571457 DNAH11Q96DT5 4516 aa8.38□□□□□ -1.07
CHMP6-202ENST00000571457 DNAH2Q9P225 4427 aa8.38□□□□□ -1.07
CHMP6-202ENST00000571457 A0A1B0GVY2 172 aa8.38□□□□□ -1.07
CHMP6-202ENST00000571457 DHFRP00374 187 aa8.38□□□□□ -1.07
CHMP6-202ENST00000571457 LALBAP00709 142 aa8.38□□□□□ -1.07
CHMP6-202ENST00000571457 MAPK3P27361 379 aaPredicted RBP8.38□□□□□ -1.07
CHMP6-202ENST00000571457 NANOS2P60321 138 aaKnown RBP8.38□□□□□ -1.07
CHMP6-202ENST00000571457 MED21Q13503 144 aa8.38□□□□□ -1.07
CHMP6-202ENST00000571457 OR10K2Q6IF99 312 aa8.38□□□□□ -1.07
CHMP6-202ENST00000571457 CLEC19AQ6UXS0 136 aa8.38□□□□□ -1.07
CHMP6-202ENST00000571457 IDO2Q6ZQW0 420 aa8.38□□□□□ -1.07
CHMP6-202ENST00000571457 MMD2Q8IY49 270 aa8.38□□□□□ -1.07
CHMP6-202ENST00000571457 GVQW1Q8N7I0 195 aa8.38□□□□□ -1.07
CHMP6-202ENST00000571457 OSR1Q8TAX0 266 aaPredicted RBP8.38□□□□□ -1.07
CHMP6-202ENST00000571457 GALNT14Q96FL9 552 aa8.38□□□□□ -1.07
CHMP6-202ENST00000571457 ADTRPQ96IZ2 230 aa8.38□□□□□ -1.07
CHMP6-202ENST00000571457 PGLYRP3Q96LB9 341 aa8.38□□□□□ -1.07
CHMP6-202ENST00000571457 DERL3Q96Q80 235 aa8.38□□□□□ -1.07
CHMP6-202ENST00000571457 C6orf62Q9GZU0 229 aaPredicted RBP8.38□□□□□ -1.07
CHMP6-202ENST00000571457 C5orf66Q9H5L9 145 aa8.38□□□□□ -1.07
CHMP6-202ENST00000571457 ZNF430Q9H8G1 570 aaPredicted RBP8.38□□□□□ -1.07
CHMP6-202ENST00000571457 Q9N2K0 584 aa8.38□□□□□ -1.07
CHMP6-202ENST00000571457 SDHAF2Q9NX18 166 aa8.38□□□□□ -1.07
CHMP6-202ENST00000571457 MRPL27Q9P0M9 148 aaKnown RBP8.38□□□□□ -1.07
CHMP6-202ENST00000571457 DPPA5A6NC42 116 aa8.37□□□□□ -1.07
CHMP6-202ENST00000571457 XRCC3O43542 346 aa8.37□□□□□ -1.07
CHMP6-202ENST00000571457 CRYZL1O95825 349 aa8.37□□□□□ -1.07
CHMP6-202ENST00000571457 C8orf88P0DMB2 117 aa8.37□□□□□ -1.07
CHMP6-202ENST00000571457 MYOD1P15172 320 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms