RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 MOB4Q9Y3A3 225 aa10.56□□□□□ -0.72
CCDC40-205ENST00000571028 WASHC3Q9Y3C0 194 aa10.56□□□□□ -0.72
CCDC40-205ENST00000571028 LINC00854A0A1B0GVQ3 168 aa10.55□□□□□ -0.72
CCDC40-205ENST00000571028 OR5H14A6NHG9 310 aa10.55□□□□□ -0.72
CCDC40-205ENST00000571028 SLC22A5O76082 557 aa10.55□□□□□ -0.72
CCDC40-205ENST00000571028 CD74P04233 296 aa10.55□□□□□ -0.72
CCDC40-205ENST00000571028 AKAIN1P0CW23 69 aa10.55□□□□□ -0.72
CCDC40-205ENST00000571028 CNTFRP26992 372 aa10.55□□□□□ -0.72
CCDC40-205ENST00000571028 MC5RP33032 325 aa10.55□□□□□ -0.72
CCDC40-205ENST00000571028 DUTP33316 252 aaKnown RBP10.55□□□□□ -0.72
CCDC40-205ENST00000571028 ETV6P41212 452 aa10.55□□□□□ -0.72
CCDC40-205ENST00000571028 THBS3P49746 956 aa10.55□□□□□ -0.72
CCDC40-205ENST00000571028 PPP5CP53041 499 aa10.55□□□□□ -0.72
CCDC40-205ENST00000571028 F2RL1P55085 397 aa10.55□□□□□ -0.72
CCDC40-205ENST00000571028 SSBP1Q04837 148 aaKnown RBP10.55□□□□□ -0.72
CCDC40-205ENST00000571028 CBX3Q13185 183 aa10.55□□□□□ -0.72
CCDC40-205ENST00000571028 PHLDA2Q53GA4 152 aa10.55□□□□□ -0.72
CCDC40-205ENST00000571028 ZNF57Q68EA5 555 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-205ENST00000571028 ZNF660Q6AZW8 331 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-205ENST00000571028 ZNF818PQ6ZRF7 136 aa10.55□□□□□ -0.72
CCDC40-205ENST00000571028 TOMM5Q8N4H5 51 aa10.55□□□□□ -0.72
CCDC40-205ENST00000571028 OR5AN1Q8NGI8 311 aa10.55□□□□□ -0.72
CCDC40-205ENST00000571028 MOB3AQ96BX8 217 aa10.55□□□□□ -0.72
CCDC40-205ENST00000571028 PRSS22Q9GZN4 317 aa10.55□□□□□ -0.72
CCDC40-205ENST00000571028 SRRQ9GZT4 340 aa10.55□□□□□ -0.72
CCDC40-205ENST00000571028 PTTG2Q9NZH5 202 aa10.55□□□□□ -0.72
CCDC40-205ENST00000571028 ANKRD20A5PA0PJZ0 165 aa10.54□□□□□ -0.72
CCDC40-205ENST00000571028 LINC00473A8K010 186 aa10.54□□□□□ -0.72
CCDC40-205ENST00000571028 DISC1C4P0D8 188 aa10.54□□□□□ -0.72
CCDC40-205ENST00000571028 FCGR3BO75015 233 aa10.54□□□□□ -0.72
CCDC40-205ENST00000571028 IGLV2-14P01704 120 aa10.54□□□□□ -0.72
CCDC40-205ENST00000571028 CD28P10747 220 aa10.54□□□□□ -0.72
CCDC40-205ENST00000571028 TBPP20226 339 aa10.54□□□□□ -0.72
CCDC40-205ENST00000571028 PTBP1P26599 531 aaKnown RBP eCLIP10.54□□□□□ -0.72
CCDC40-205ENST00000571028 RPL30P62888 115 aaKnown RBP10.54□□□□□ -0.72
CCDC40-205ENST00000571028 EBI3Q14213 229 aa10.54□□□□□ -0.72
CCDC40-205ENST00000571028 MEF2DQ14814 521 aa10.54□□□□□ -0.72
CCDC40-205ENST00000571028 RTL8BQ17RB0 113 aa10.54□□□□□ -0.72
CCDC40-205ENST00000571028 Q6ZS46 218 aa10.54□□□□□ -0.72
CCDC40-205ENST00000571028 KCTD9Q7L273 389 aa10.54□□□□□ -0.72
CCDC40-205ENST00000571028 C16orf82Q7Z2V1 217 aa10.54□□□□□ -0.72
CCDC40-205ENST00000571028 MFSD4AQ8N468 514 aa10.54□□□□□ -0.72
CCDC40-205ENST00000571028 OR4C16Q8NGL9 310 aa10.54□□□□□ -0.72
CCDC40-205ENST00000571028 OR51H1Q8NH63 302 aa10.54□□□□□ -0.72
CCDC40-205ENST00000571028 ADTRPQ96IZ2 230 aa10.54□□□□□ -0.72
CCDC40-205ENST00000571028 RASL11BQ9BPW5 248 aa10.54□□□□□ -0.72
CCDC40-205ENST00000571028 COL7A1Q02388 2944 aa10.54□□□□□ -0.72
CCDC40-205ENST00000571028 NOTCH3Q9UM47 2321 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 CRYZL1O95825 349 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 IGKV1-16P04430 117 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 PF4V1P10720 104 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 PI3P19957 117 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 GNRHRP30968 328 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 ZNF45Q02386 682 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 PLGLAQ15195 96 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 BAK1Q16611 211 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 TMEM95Q3KNT9 176 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 AADACL3Q5VUY0 350 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 TRIQKQ629K1 86 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 Q8N6K4 173 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 C5orf56Q8N8D9 126 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 GDPD1Q8N9F7 314 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 TRIM63Q969Q1 353 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 FLYWCH2Q96CP2 140 aaKnown RBP10.53□□□□□ -0.72
CCDC40-205ENST00000571028 CLCC1Q96S66 551 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 HSD17B10Q99714 261 aaKnown RBP10.53□□□□□ -0.72
CCDC40-205ENST00000571028 CITED2Q99967 270 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-205ENST00000571028 B9D2Q9BPU9 175 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 ZNF702PQ9H963 129 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 KIAA1456Q9P272 454 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 PRELID3BQ9Y3B1 194 aa10.53□□□□□ -0.72
CCDC40-205ENST00000571028 GPR31O00270 319 aa10.52□□□□□ -0.73
CCDC40-205ENST00000571028 SHOXO15266 292 aa10.52□□□□□ -0.73
CCDC40-205ENST00000571028 NBR2O15453 112 aa10.52□□□□□ -0.73
CCDC40-205ENST00000571028 PF4P02776 101 aa10.52□□□□□ -0.73
CCDC40-205ENST00000571028 RLN1P04808 185 aa10.52□□□□□ -0.73
CCDC40-205ENST00000571028 ZNF735P0CB33 412 aa10.52□□□□□ -0.73
CCDC40-205ENST00000571028 AP3S2P59780 193 aa10.52□□□□□ -0.73
CCDC40-205ENST00000571028 DCTN2Q13561 401 aaKnown RBP10.52□□□□□ -0.73
CCDC40-205ENST00000571028 LPCAT3Q6P1A2 487 aa10.52□□□□□ -0.73
CCDC40-205ENST00000571028 PDPNQ86YL7 162 aa10.52□□□□□ -0.73
CCDC40-205ENST00000571028 ARRDC1Q8N5I2 433 aa10.52□□□□□ -0.73
CCDC40-205ENST00000571028 Q8N9W7 124 aa10.52□□□□□ -0.73
CCDC40-205ENST00000571028 ZBTB34Q8NCN2 500 aa10.52□□□□□ -0.73
CCDC40-205ENST00000571028 OR51S1Q8NGJ8 323 aa10.52□□□□□ -0.73
CCDC40-205ENST00000571028 MARCH1Q8TCQ1 289 aa10.52□□□□□ -0.73
CCDC40-205ENST00000571028 SDHCQ99643 169 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-205ENST00000571028 FBXL15Q9H469 300 aa10.52□□□□□ -0.73
CCDC40-205ENST00000571028 HRASLSQ9HDD0 168 aa10.52□□□□□ -0.73
CCDC40-205ENST00000571028 ZNF107Q9UII5 783 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-205ENST00000571028 A0A1W2PRX2 142 aa10.51□□□□□ -0.73
CCDC40-205ENST00000571028 M0QZK8 103 aa10.51□□□□□ -0.73
CCDC40-205ENST00000571028 PGLYRP1O75594 196 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-205ENST00000571028 AMY1AP04745 511 aa10.51□□□□□ -0.73
CCDC40-205ENST00000571028 CATR1Q13166 79 aa10.51□□□□□ -0.73
CCDC40-205ENST00000571028 KLF9Q13886 244 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-205ENST00000571028 ZNF66Q6ZN08 573 aa10.51□□□□□ -0.73
CCDC40-205ENST00000571028 CMTM1Q8IZ96 169 aa10.51□□□□□ -0.73
CCDC40-205ENST00000571028 TERB2Q8NHR7 220 aa10.51□□□□□ -0.73
CCDC40-205ENST00000571028 DDB2Q92466 427 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms