RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 A0A0U1RQK1 487 aa12.44□□□□□ -0.42
HERPUD1-219ENST00000570273 CRYZL1O95825 349 aa12.44□□□□□ -0.42
HERPUD1-219ENST00000570273 RRASP10301 218 aa12.44□□□□□ -0.42
HERPUD1-219ENST00000570273 RAB13P51153 203 aa12.44□□□□□ -0.42
HERPUD1-219ENST00000570273 BRWD1-AS2P59051 145 aa12.44□□□□□ -0.42
HERPUD1-219ENST00000570273 ZNF585BQ52M93 769 aa12.44□□□□□ -0.42
HERPUD1-219ENST00000570273 CADM3Q8N126 398 aa12.44□□□□□ -0.42
HERPUD1-219ENST00000570273 AJUBAQ96IF1 538 aa12.44□□□□□ -0.42
HERPUD1-219ENST00000570273 TMEM56Q96MV1 263 aa12.44□□□□□ -0.42
HERPUD1-219ENST00000570273 NUP50Q9UKX7 468 aa12.44□□□□□ -0.42
HERPUD1-219ENST00000570273 TMEM56-RWDD3S4R434 201 aa12.44□□□□□ -0.42
HERPUD1-219ENST00000570273 GOSR2O14653 212 aa12.43□□□□□ -0.42
HERPUD1-219ENST00000570273 CDS2O95674 445 aa12.43□□□□□ -0.42
HERPUD1-219ENST00000570273 RPA2P15927 270 aa12.43□□□□□ -0.42
HERPUD1-219ENST00000570273 MC5RP33032 325 aa12.43□□□□□ -0.42
HERPUD1-219ENST00000570273 BPIFB3P59826 476 aa12.43□□□□□ -0.42
HERPUD1-219ENST00000570273 RRAS2P62070 204 aaPredicted RBP12.43□□□□□ -0.42
HERPUD1-219ENST00000570273 FCN2Q15485 313 aa12.43□□□□□ -0.42
HERPUD1-219ENST00000570273 DHRS7BQ6IAN0 325 aaPredicted RBP12.43□□□□□ -0.42
HERPUD1-219ENST00000570273 PDPNQ86YL7 162 aa12.43□□□□□ -0.42
HERPUD1-219ENST00000570273 SELENOHQ8IZQ5 122 aaKnown RBP12.43□□□□□ -0.42
HERPUD1-219ENST00000570273 LRTM2Q8N967 370 aa12.43□□□□□ -0.42
HERPUD1-219ENST00000570273 RNASE11Q8TAA1 199 aaKnown RBP12.43□□□□□ -0.42
HERPUD1-219ENST00000570273 RBPMSQ93062 196 aaKnown RBP12.43□□□□□ -0.42
HERPUD1-219ENST00000570273 IL22RA2Q969J5 263 aa12.43□□□□□ -0.42
HERPUD1-219ENST00000570273 TMUB1Q9BVT8 246 aa12.43□□□□□ -0.42
HERPUD1-219ENST00000570273 MS4A7Q9GZW8 240 aaPredicted RBP12.43□□□□□ -0.42
HERPUD1-219ENST00000570273 COMMD9Q9P000 198 aa12.43□□□□□ -0.42
HERPUD1-219ENST00000570273 MGAT4CQ9UBM8 478 aa12.43□□□□□ -0.42
HERPUD1-219ENST00000570273 FAM96BQ9Y3D0 163 aa12.43□□□□□ -0.42
HERPUD1-219ENST00000570273 ACANP16112 2415 aa12.42□□□□□ -0.42
HERPUD1-219ENST00000570273 HPRT1P00492 218 aa12.42□□□□□ -0.42
HERPUD1-219ENST00000570273 IGKV1-39P01597 117 aa12.42□□□□□ -0.42
HERPUD1-219ENST00000570273 IGKV1D-39P04432 117 aa12.42□□□□□ -0.42
HERPUD1-219ENST00000570273 HOXB5P09067 269 aa12.42□□□□□ -0.42
HERPUD1-219ENST00000570273 CD99P14209 185 aa12.42□□□□□ -0.42
HERPUD1-219ENST00000570273 BCAP31P51572 246 aa12.42□□□□□ -0.42
HERPUD1-219ENST00000570273 AKR1C2P52895 323 aa12.42□□□□□ -0.42
HERPUD1-219ENST00000570273 SLC35G3Q8N808 338 aa12.42□□□□□ -0.42
HERPUD1-219ENST00000570273 CFHR4Q92496 578 aa12.42□□□□□ -0.42
HERPUD1-219ENST00000570273 RBMXL1Q96E39 390 aaKnown RBP12.42□□□□□ -0.42
HERPUD1-219ENST00000570273 PLEKHA2Q9HB19 425 aa12.42□□□□□ -0.42
HERPUD1-219ENST00000570273 CSPG4Q6UVK1 2322 aa12.42□□□□□ -0.42
HERPUD1-219ENST00000570273 PIGBOS1A0A0B4J2F0 54 aa12.41□□□□□ -0.42
HERPUD1-219ENST00000570273 CCSO14618 274 aa12.41□□□□□ -0.42
HERPUD1-219ENST00000570273 ADAP1O75689 374 aa12.41□□□□□ -0.42
HERPUD1-219ENST00000570273 ATG12O94817 140 aa12.41□□□□□ -0.42
HERPUD1-219ENST00000570273 VENTXO95231 258 aa12.41□□□□□ -0.42
HERPUD1-219ENST00000570273 IGKV1-16P04430 117 aa12.41□□□□□ -0.42
HERPUD1-219ENST00000570273 FBP1P09467 338 aa12.41□□□□□ -0.42
HERPUD1-219ENST00000570273 HNF1AP20823 631 aa12.41□□□□□ -0.42
HERPUD1-219ENST00000570273 CD1BP29016 333 aa12.41□□□□□ -0.42
HERPUD1-219ENST00000570273 SRP14P37108 136 aaKnown RBP12.41□□□□□ -0.42
HERPUD1-219ENST00000570273 ERVK-16P61578 105 aa12.41□□□□□ -0.42
HERPUD1-219ENST00000570273 FAM120AOSQ5T036 256 aa12.41□□□□□ -0.42
HERPUD1-219ENST00000570273 IL17RELQ6ZVW7 336 aa12.41□□□□□ -0.42
HERPUD1-219ENST00000570273 LYZL2Q7Z4W2 148 aa12.41□□□□□ -0.42
HERPUD1-219ENST00000570273 FLYWCH2Q96CP2 140 aaKnown RBP12.41□□□□□ -0.42
HERPUD1-219ENST00000570273 R3HDM4Q96D70 268 aa12.41□□□□□ -0.42
HERPUD1-219ENST00000570273 RAB18Q9NP72 206 aa12.41□□□□□ -0.42
HERPUD1-219ENST00000570273 SOX21Q9Y651 276 aaPredicted RBP12.41□□□□□ -0.42
HERPUD1-219ENST00000570273 DUXBA0A1W2PPF3 345 aa12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 HMX3A6NHT5 357 aa12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 DBX1A6NMT0 343 aa12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 FAM25EA8MYX2 175 aa12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 SHOXO15266 292 aa12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 LY6G6DO95868 133 aa12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 KRASP01116 189 aa12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 IFNA21P01568 189 aa12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 SULT1A3P0DMM9 295 aa12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 SULT1A4P0DMN0 295 aa12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 NQO2P16083 231 aa12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 BRS3P32247 399 aa12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 RPS16P62249 146 aaKnown RBP12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 HABP2Q14520 560 aaPredicted RBP12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 C2orf68Q2NKX9 166 aa12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 TMEM177Q53S58 311 aa12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 GGNBP1Q5YKI7 109 aa12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 OR4C13Q8NGP0 309 aa12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 OSR1Q8TAX0 266 aaPredicted RBP12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 HARBI1Q96MB7 349 aa12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 SMR3AQ99954 134 aa12.4□□□□□ -0.42
HERPUD1-219ENST00000570273 HRASP01112 189 aa12.39□□□□□ -0.43
HERPUD1-219ENST00000570273 IGKV1D-33P01593 117 aa12.39□□□□□ -0.43
HERPUD1-219ENST00000570273 IGKV1-33P01594 117 aa12.39□□□□□ -0.43
HERPUD1-219ENST00000570273 IGKV1-5P01602 117 aa12.39□□□□□ -0.43
HERPUD1-219ENST00000570273 SNRNP70P08621 437 aaKnown RBP12.39□□□□□ -0.43
HERPUD1-219ENST00000570273 FOSL1P15407 271 aa12.39□□□□□ -0.43
HERPUD1-219ENST00000570273 CD24P25063 80 aa12.39□□□□□ -0.43
HERPUD1-219ENST00000570273 G6PCP35575 357 aa12.39□□□□□ -0.43
HERPUD1-219ENST00000570273 HES1Q14469 280 aa12.39□□□□□ -0.43
HERPUD1-219ENST00000570273 SSX9Q7RTT3 188 aa12.39□□□□□ -0.43
HERPUD1-219ENST00000570273 DMBX1Q8NFW5 382 aa12.39□□□□□ -0.43
HERPUD1-219ENST00000570273 OR11H7Q8NGC8 314 aa12.39□□□□□ -0.43
HERPUD1-219ENST00000570273 OR5M8Q8NGP6 311 aa12.39□□□□□ -0.43
HERPUD1-219ENST00000570273 C22orf15Q8WYQ4 148 aa12.39□□□□□ -0.43
HERPUD1-219ENST00000570273 RRNAD1Q96FB5 475 aaKnown RBP12.39□□□□□ -0.43
HERPUD1-219ENST00000570273 TMED3Q9Y3Q3 217 aa12.39□□□□□ -0.43
HERPUD1-219ENST00000570273 C13orf42A0A1B0GVH6 325 aa12.38□□□□□ -0.43
HERPUD1-219ENST00000570273 MDFIC2A0A1B0GVS7 189 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms