RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 ZNF702PQ9H963 129 aa10.4□□□□□ -0.74
CNOT1-217ENST00000569263 SCP2D1Q9UJQ7 156 aa10.4□□□□□ -0.74
CNOT1-217ENST00000569263 CLPSL1A2RUU4 121 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 SHOXO15266 292 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 SPDEFO95238 335 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 IGKV1-16P04430 117 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 RLN1P04808 185 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 ZNF735P0CB33 412 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 CNTFRP26992 372 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 ECI1P42126 302 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 VDAC2P45880 294 aaPredicted RBP10.39□□□□□ -0.75
CNOT1-217ENST00000569263 F2RL1P55085 397 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 UCP3P55916 312 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 EIF4EBP1Q13541 118 aaPredicted RBP10.39□□□□□ -0.75
CNOT1-217ENST00000569263 BAK1Q16611 211 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 PHLDA2Q53GA4 152 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 AWAT1Q58HT5 328 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 C12orf54Q6X4T0 127 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 Q8N9W7 124 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 OR51S1Q8NGJ8 323 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 OR51H1Q8NH63 302 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 OR4S2Q8NH73 311 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 TERB2Q8NHR7 220 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 LINC01006Q8NI28 216 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 DEDD2Q8WXF8 326 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 RITA1Q96K30 269 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 RNF5Q99942 180 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 RSRP1Q9BUV0 290 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 C16orf95Q9H693 158 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 LIN7CQ9NUP9 197 aaKnown RBP10.39□□□□□ -0.75
CNOT1-217ENST00000569263 RNF114Q9Y508 228 aa10.39□□□□□ -0.75
CNOT1-217ENST00000569263 FBN1P35555 2871 aaKnown RBP10.39□□□□□ -0.75
CNOT1-217ENST00000569263 RRHO14718 337 aa10.38□□□□□ -0.75
CNOT1-217ENST00000569263 AMY1AP04745 511 aa10.38□□□□□ -0.75
CNOT1-217ENST00000569263 TMEM177Q53S58 311 aa10.38□□□□□ -0.75
CNOT1-217ENST00000569263 IDO2Q6ZQW0 420 aa10.38□□□□□ -0.75
CNOT1-217ENST00000569263 SPAG16Q8N0X2 631 aa10.38□□□□□ -0.75
CNOT1-217ENST00000569263 FAM71E2Q8N5Q1 922 aa10.38□□□□□ -0.75
CNOT1-217ENST00000569263 NPBQ8NG41 125 aa10.38□□□□□ -0.75
CNOT1-217ENST00000569263 ZFAND1Q8TCF1 268 aa10.38□□□□□ -0.75
CNOT1-217ENST00000569263 MARCH1Q8TCQ1 289 aa10.38□□□□□ -0.75
CNOT1-217ENST00000569263 ZNF486Q96H40 463 aaPredicted RBP10.38□□□□□ -0.75
CNOT1-217ENST00000569263 SDHCQ99643 169 aaPredicted RBP10.38□□□□□ -0.75
CNOT1-217ENST00000569263 WDR12Q9GZL7 423 aaKnown RBP10.38□□□□□ -0.75
CNOT1-217ENST00000569263 HRASLSQ9HDD0 168 aa10.38□□□□□ -0.75
CNOT1-217ENST00000569263 PLSCR3Q9NRY6 295 aa10.38□□□□□ -0.75
CNOT1-217ENST00000569263 C14orf166Q9Y224 244 aaKnown RBP10.38□□□□□ -0.75
CNOT1-217ENST00000569263 SIGLEC9Q9Y336 463 aa10.38□□□□□ -0.75
CNOT1-217ENST00000569263 HAX1O00165 279 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 SLC25A17O43808 307 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 PGLYRP1O75594 196 aaPredicted RBP10.37□□□□□ -0.75
CNOT1-217ENST00000569263 NDUFA3O95167 84 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 IL7P13232 177 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 LGALS7P47929 136 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 ZNF846Q147U1 533 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 PSG5Q15238 335 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 C5orf64Q2M2E5 130 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 TMEM95Q3KNT9 176 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 VMA21Q3ZAQ7 101 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 Q6ZS46 218 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 SLC35E3Q7Z769 313 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 Q8N2B8 174 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 CCDC71LQ8N9Z2 235 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 OR13C8Q8NGS7 320 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 OSR1Q8TAX0 266 aaPredicted RBP10.37□□□□□ -0.75
CNOT1-217ENST00000569263 CCDC32Q9BV29 185 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 FBXL15Q9H469 300 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 SLC2A9Q9NRM0 540 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 SLC2A8Q9NY64 477 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 COPZ2Q9P299 210 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 METTL1Q9UBP6 276 aaKnown RBP10.37□□□□□ -0.75
CNOT1-217ENST00000569263 MMP24Q9Y5R2 645 aa10.37□□□□□ -0.75
CNOT1-217ENST00000569263 LINC00854A0A1B0GVQ3 168 aa10.36□□□□□ -0.75
CNOT1-217ENST00000569263 KCNAB3O43448 404 aa10.36□□□□□ -0.75
CNOT1-217ENST00000569263 HLA-DRB1P01911 266 aa10.36□□□□□ -0.75
CNOT1-217ENST00000569263 PI3P19957 117 aa10.36□□□□□ -0.75
CNOT1-217ENST00000569263 COMPP49747 757 aaPredicted RBP10.36□□□□□ -0.75
CNOT1-217ENST00000569263 SURF2Q15527 256 aaPredicted RBP10.36□□□□□ -0.75
CNOT1-217ENST00000569263 TBC1D26Q86UD7 250 aa10.36□□□□□ -0.75
CNOT1-217ENST00000569263 FOXRED2Q8IWF2 684 aa10.36□□□□□ -0.75
CNOT1-217ENST00000569263 CD300LFQ8TDQ1 290 aa10.36□□□□□ -0.75
CNOT1-217ENST00000569263 SCGB3A2Q96PL1 93 aa10.36□□□□□ -0.75
CNOT1-217ENST00000569263 NAP1L6A6NFF2 107 aa10.35□□□□□ -0.75
CNOT1-217ENST00000569263 CENPXA8MT69 81 aa10.35□□□□□ -0.75
CNOT1-217ENST00000569263 RBFOX2O43251 390 aaKnown RBP eCLIP10.35□□□□□ -0.752e-8■■□□□ 14.5
CNOT1-217ENST00000569263 RAMP3O60896 148 aa10.35□□□□□ -0.75
CNOT1-217ENST00000569263 HRASP01112 189 aa10.35□□□□□ -0.75
CNOT1-217ENST00000569263 IGLV2-23P01705 113 aa10.35□□□□□ -0.75
CNOT1-217ENST00000569263 IGHG2P01859 326 aa10.35□□□□□ -0.75
CNOT1-217ENST00000569263 CTSDP07339 412 aaPredicted RBP10.35□□□□□ -0.75
CNOT1-217ENST00000569263 VSIG10L2P0DP72 767 aa10.35□□□□□ -0.75
CNOT1-217ENST00000569263 F2RP25116 425 aa10.35□□□□□ -0.75
CNOT1-217ENST00000569263 CD40LGP29965 261 aa10.35□□□□□ -0.75
CNOT1-217ENST00000569263 PIGPP57054 158 aa10.35□□□□□ -0.75
CNOT1-217ENST00000569263 RND3P61587 244 aa10.35□□□□□ -0.75
CNOT1-217ENST00000569263 LIN54Q6MZP7 749 aa10.35□□□□□ -0.75
CNOT1-217ENST00000569263 TCTEX1D1Q8N7M0 179 aa10.35□□□□□ -0.75
CNOT1-217ENST00000569263 C3orf56Q8N813 242 aa10.35□□□□□ -0.75
CNOT1-217ENST00000569263 MRGPRFQ96AM1 343 aa10.35□□□□□ -0.75
CNOT1-217ENST00000569263 CLCC1Q96S66 551 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms