RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 NKAIN3Q8N8D7 197 aa9.33□□□□□ -0.92
SNX29-207ENST00000568949 WDR89Q96FK6 387 aaPredicted RBP9.33□□□□□ -0.92
SNX29-207ENST00000568949 YTHDF1Q9BYJ9 559 aaKnown RBP9.33□□□□□ -0.92
SNX29-207ENST00000568949 RIMS4Q9H426 269 aaPredicted RBP9.33□□□□□ -0.92
SNX29-207ENST00000568949 CHMP1AQ9HD42 196 aaPredicted RBP9.33□□□□□ -0.92
SNX29-207ENST00000568949 AKIP1Q9NQ31 210 aa9.33□□□□□ -0.92
SNX29-207ENST00000568949 SLC35D1Q9NTN3 355 aa9.33□□□□□ -0.92
SNX29-207ENST00000568949 RRP15Q9Y3B9 282 aaKnown RBP9.33□□□□□ -0.92
SNX29-207ENST00000568949 HECTD4Q9Y4D8 3996 aa9.32□□□□□ -0.92
SNX29-207ENST00000568949 TRBV6-6A0A0A6YYG2 114 aa9.32□□□□□ -0.92
SNX29-207ENST00000568949 TRBV9A0A0B4J1U6 114 aa9.32□□□□□ -0.92
SNX29-207ENST00000568949 MSGN1A6NI15 193 aa9.32□□□□□ -0.92
SNX29-207ENST00000568949 LGALS9O00182 355 aa9.32□□□□□ -0.92
SNX29-207ENST00000568949 TUSC2O75896 110 aa9.32□□□□□ -0.92
SNX29-207ENST00000568949 PSMA1P25786 263 aaKnown RBP9.32□□□□□ -0.92
SNX29-207ENST00000568949 BMI1P35226 326 aa9.32□□□□□ -0.92
SNX29-207ENST00000568949 RHOGP84095 191 aa9.32□□□□□ -0.92
SNX29-207ENST00000568949 ATP5G2Q06055 141 aa9.32□□□□□ -0.92
SNX29-207ENST00000568949 SPHARQ15513 63 aa9.32□□□□□ -0.92
SNX29-207ENST00000568949 Q6ZWC4 215 aa9.32□□□□□ -0.92
SNX29-207ENST00000568949 PRSS48Q7RTY5 328 aa9.32□□□□□ -0.92
SNX29-207ENST00000568949 C6orf201Q7Z4U5 140 aa9.32□□□□□ -0.92
SNX29-207ENST00000568949 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.32□□□□□ -0.92
SNX29-207ENST00000568949 SETD6Q8TBK2 473 aa9.32□□□□□ -0.92
SNX29-207ENST00000568949 PGLYRP3Q96LB9 341 aa9.32□□□□□ -0.92
SNX29-207ENST00000568949 PHB2Q99623 299 aa9.32□□□□□ -0.92
SNX29-207ENST00000568949 DUSP21Q9H596 190 aa9.32□□□□□ -0.92
SNX29-207ENST00000568949 OR1A1Q9P1Q5 309 aa9.32□□□□□ -0.92
SNX29-207ENST00000568949 CLEC2DQ9UHP7 191 aa9.32□□□□□ -0.92
SNX29-207ENST00000568949 A0A1W2PPK0 400 aa9.31□□□□□ -0.92
SNX29-207ENST00000568949 SPRY2O43597 315 aa9.31□□□□□ -0.92
SNX29-207ENST00000568949 LALBAP00709 142 aa9.31□□□□□ -0.92
SNX29-207ENST00000568949 UBBP0CG47 229 aa9.31□□□□□ -0.92
SNX29-207ENST00000568949 CELP19835 753 aa9.31□□□□□ -0.92
SNX29-207ENST00000568949 MED22Q15528 200 aa9.31□□□□□ -0.92
SNX29-207ENST00000568949 ANKRD55Q3KP44 614 aa9.31□□□□□ -0.92
SNX29-207ENST00000568949 TMEM217Q8N7C4 229 aa9.31□□□□□ -0.92
SNX29-207ENST00000568949 ZNF485Q8NCK3 441 aa9.31□□□□□ -0.92
SNX29-207ENST00000568949 OR52B4Q8NGK2 314 aa9.31□□□□□ -0.92
SNX29-207ENST00000568949 KCNG3Q8TAE7 436 aa9.31□□□□□ -0.92
SNX29-207ENST00000568949 PHYHIPQ92561 330 aa9.31□□□□□ -0.92
SNX29-207ENST00000568949 CNBD2Q96M20 576 aa9.31□□□□□ -0.92
SNX29-207ENST00000568949 HARBI1Q96MB7 349 aa9.31□□□□□ -0.92
SNX29-207ENST00000568949 CCDC90BQ9GZT6 254 aa9.31□□□□□ -0.92
SNX29-207ENST00000568949 MGAT4AQ9UM21 535 aa9.31□□□□□ -0.92
SNX29-207ENST00000568949 M0R1X1 148 aa9.3□□□□□ -0.92
SNX29-207ENST00000568949 DENRO43583 198 aaKnown RBP9.3□□□□□ -0.92
SNX29-207ENST00000568949 GGCTO75223 188 aaKnown RBP9.3□□□□□ -0.92
SNX29-207ENST00000568949 APELAP0DMC3 54 aa9.3□□□□□ -0.92
SNX29-207ENST00000568949 EDN2P20800 178 aa9.3□□□□□ -0.92
SNX29-207ENST00000568949 CBLN1P23435 193 aa9.3□□□□□ -0.92
SNX29-207ENST00000568949 CRHBPP24387 322 aa9.3□□□□□ -0.92
SNX29-207ENST00000568949 MAP2K4P45985 399 aa9.3□□□□□ -0.92
SNX29-207ENST00000568949 GABARAPL2P60520 117 aa9.3□□□□□ -0.92
SNX29-207ENST00000568949 RPS27AP62979 156 aaKnown RBP9.3□□□□□ -0.92
SNX29-207ENST00000568949 HLA-DRB3P79483 266 aa9.3□□□□□ -0.92
SNX29-207ENST00000568949 TAGLNQ01995 201 aaKnown RBP9.3□□□□□ -0.92
SNX29-207ENST00000568949 ZNF45Q02386 682 aa9.3□□□□□ -0.92
SNX29-207ENST00000568949 MRGPRG-AS1Q2M3A8 158 aa9.3□□□□□ -0.92
SNX29-207ENST00000568949 TMEM177Q53S58 311 aa9.3□□□□□ -0.92
SNX29-207ENST00000568949 ZNF57Q68EA5 555 aaPredicted RBP9.3□□□□□ -0.92
SNX29-207ENST00000568949 LAIR2Q6ISS4 152 aa9.3□□□□□ -0.92
SNX29-207ENST00000568949 TMEM61Q8N0U2 210 aa9.3□□□□□ -0.92
SNX29-207ENST00000568949 NECAP1Q8NC96 275 aa9.3□□□□□ -0.92
SNX29-207ENST00000568949 PHLDA1Q8WV24 401 aaPredicted RBP9.3□□□□□ -0.92
SNX29-207ENST00000568949 UFD1Q92890 307 aa9.3□□□□□ -0.92
SNX29-207ENST00000568949 DERL3Q96Q80 235 aa9.3□□□□□ -0.92
SNX29-207ENST00000568949 TM2D1Q9BX74 207 aa9.3□□□□□ -0.92
SNX29-207ENST00000568949 DMRT1Q9Y5R6 373 aa9.3□□□□□ -0.92
SNX29-207ENST00000568949 SRRM4A7MD48 611 aaKnown RBP9.29□□□□□ -0.92
SNX29-207ENST00000568949 UBE2CO00762 179 aa9.29□□□□□ -0.92
SNX29-207ENST00000568949 SHOXO15266 292 aa9.29□□□□□ -0.92
SNX29-207ENST00000568949 MPPED1O15442 326 aa9.29□□□□□ -0.92
SNX29-207ENST00000568949 HTR2CP28335 458 aa9.29□□□□□ -0.92
SNX29-207ENST00000568949 APOC4P55056 127 aa9.29□□□□□ -0.92
SNX29-207ENST00000568949 CBX3Q13185 183 aa9.29□□□□□ -0.92
SNX29-207ENST00000568949 GLT8D1Q68CQ7 371 aa9.29□□□□□ -0.92
SNX29-207ENST00000568949 GPHB5Q86YW7 130 aa9.29□□□□□ -0.92
SNX29-207ENST00000568949 TEX45Q8NA69 505 aa9.29□□□□□ -0.92
SNX29-207ENST00000568949 SRSF12Q8WXF0 261 aaKnown RBP9.29□□□□□ -0.92
SNX29-207ENST00000568949 TMEM59Q9BXS4 323 aa9.29□□□□□ -0.92
SNX29-207ENST00000568949 PLEKHJ1Q9NW61 149 aa9.29□□□□□ -0.92
SNX29-207ENST00000568949 PPP5D1E7EU14 171 aa9.28□□□□□ -0.92
SNX29-207ENST00000568949 ARL6IP5O75915 188 aa9.28□□□□□ -0.92
SNX29-207ENST00000568949 PRH1P02810 166 aa9.28□□□□□ -0.92
SNX29-207ENST00000568949 SCTP09683 121 aa9.28□□□□□ -0.92
SNX29-207ENST00000568949 UBE2KP61086 200 aa9.28□□□□□ -0.92
SNX29-207ENST00000568949 MLLT11Q13015 90 aaPredicted RBP9.28□□□□□ -0.92
SNX29-207ENST00000568949 TBCEQ15813 527 aaPredicted RBP9.28□□□□□ -0.92
SNX29-207ENST00000568949 TNXAQ16473 311 aa9.28□□□□□ -0.92
SNX29-207ENST00000568949 PRSS8Q16651 343 aa9.28□□□□□ -0.92
SNX29-207ENST00000568949 RTL8BQ17RB0 113 aa9.28□□□□□ -0.92
SNX29-207ENST00000568949 C15orf32Q32M92 178 aa9.28□□□□□ -0.92
SNX29-207ENST00000568949 VMA21Q3ZAQ7 101 aa9.28□□□□□ -0.92
SNX29-207ENST00000568949 TM4SF20Q53R12 229 aa9.28□□□□□ -0.92
SNX29-207ENST00000568949 OR10K2Q6IF99 312 aa9.28□□□□□ -0.92
SNX29-207ENST00000568949 TTC9CQ8N5M4 171 aa9.28□□□□□ -0.92
SNX29-207ENST00000568949 ZFP41Q8N8Y5 198 aa9.28□□□□□ -0.92
SNX29-207ENST00000568949 FCGR1BQ92637 280 aa9.28□□□□□ -0.92
SNX29-207ENST00000568949 Q9N2K0 584 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms