RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 C12orf4Q9NQ89 552 aa7.07□□□□□ -1.28
CDH13-210ENST00000567445 OR1A1Q9P1Q5 309 aa7.07□□□□□ -1.28
CDH13-210ENST00000567445 METTL1Q9UBP6 276 aaKnown RBP7.07□□□□□ -1.28
CDH13-210ENST00000567445 FOXI3A8MTJ6 420 aaPredicted RBP7.06□□□□□ -1.28
CDH13-210ENST00000567445 SLC17A2O00624 439 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 ARPC1BO15143 372 aaKnown RBP7.06□□□□□ -1.28
CDH13-210ENST00000567445 PROP1O75360 226 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 SPDEFO95238 335 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 CA2P00918 260 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 IGHV3-11P01762 117 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 IGKV1-16P04430 117 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 SCTP09683 121 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 FRMD6-AS1P0C7T7 363 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 TPPP2P59282 170 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 PITPNAQ00169 270 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 TBCEQ15813 527 aaPredicted RBP7.06□□□□□ -1.28
CDH13-210ENST00000567445 PDPNQ86YL7 162 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 ZNF383Q8NA42 475 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 MUC7Q8TAX7 377 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 UFD1Q92890 307 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 TMEM203Q969S6 136 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 MS4A10Q96PG2 267 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 OR4C12Q96R67 309 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 TSNAXQ99598 290 aaKnown RBP7.06□□□□□ -1.28
CDH13-210ENST00000567445 GFI1Q99684 422 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 TMEM140Q9NV12 185 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 SCN3BQ9NY72 215 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 ZNF221Q9UK13 617 aa7.06□□□□□ -1.28
CDH13-210ENST00000567445 HUWE1Q7Z6Z7 4374 aaKnown RBP7.06□□□□□ -1.28
CDH13-210ENST00000567445 APOA2P02652 100 aa7.05□□□□□ -1.28
CDH13-210ENST00000567445 TRGV3P03979 118 aa7.05□□□□□ -1.28
CDH13-210ENST00000567445 VEGFCP49767 419 aa7.05□□□□□ -1.28
CDH13-210ENST00000567445 TMEM50BP56557 158 aa7.05□□□□□ -1.28
CDH13-210ENST00000567445 TPBGQ13641 420 aa7.05□□□□□ -1.28
CDH13-210ENST00000567445 IRF3Q14653 427 aa7.05□□□□□ -1.28
CDH13-210ENST00000567445 FXYD3Q14802 87 aa7.05□□□□□ -1.28
CDH13-210ENST00000567445 RAB11BQ15907 218 aa7.05□□□□□ -1.28
CDH13-210ENST00000567445 TMEM91Q6ZNR0 172 aa7.05□□□□□ -1.28
CDH13-210ENST00000567445 ARHGAP5-AS1Q96IT6 56 aa7.05□□□□□ -1.28
CDH13-210ENST00000567445 CMSS1Q9BQ75 279 aaKnown RBP7.05□□□□□ -1.28
CDH13-210ENST00000567445 ELOVL1Q9BW60 279 aa7.05□□□□□ -1.28
CDH13-210ENST00000567445 PECRQ9BY49 303 aa7.05□□□□□ -1.28
CDH13-210ENST00000567445 RDH8Q9NYR8 311 aa7.05□□□□□ -1.28
CDH13-210ENST00000567445 IGKV1-6A0A0C4DH72 117 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 PRSS29PA6NIE9 313 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 TRIM64CA6NLI5 447 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 TRDCB7Z8K6 153 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 H3BUA1 57 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 SLC25A17O43808 307 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 ARL6IP5O75915 188 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 HSMCR30P0CW71 290 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 PSMA1P25786 263 aaKnown RBP7.04□□□□□ -1.28
CDH13-210ENST00000567445 SERPINB10P48595 397 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 LINC00205P59089 165 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 RPS25P62851 125 aaKnown RBP7.04□□□□□ -1.28
CDH13-210ENST00000567445 TRAM1Q15629 374 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 PLAC9Q5JTB6 97 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 CASC10Q5T4H9 136 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.04□□□□□ -1.28
CDH13-210ENST00000567445 OR56B1Q8NGI3 324 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 GRPEL2Q8TAA5 225 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 FAM3DQ96BQ1 224 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 ZNF355PQ9NSJ1 428 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 STUB1Q9UNE7 303 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 AK6Q9Y3D8 172 aaKnown RBP7.04□□□□□ -1.28
CDH13-210ENST00000567445 A0A0G2JLM5 398 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 C13orf42A0A1B0GVH6 325 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 M0R1X1 148 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 UBE2CO00762 179 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 CNIH1O95406 144 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 IGLV1-51P01701 117 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 IGLV2-23P01705 113 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 ZP3P21754 424 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 RANBP1P43487 201 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 CLDN12P56749 244 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 SRSF7Q16629 238 aaKnown RBP eCLIP7.04□□□□□ -1.28
CDH13-210ENST00000567445 C2orf76Q3KRA6 126 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 POC5Q8NA72 575 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 OR5T1Q8NG75 326 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 OR4A4PQ8NGN8 299 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 DUSP21Q9H596 190 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 RANGRFQ9HD47 186 aaPredicted RBP7.04□□□□□ -1.28
CDH13-210ENST00000567445 SLC35D1Q9NTN3 355 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 TPRKBQ9Y3C4 175 aa7.04□□□□□ -1.28
CDH13-210ENST00000567445 LOC102723971A0A1B0GUV8 181 aa7.03□□□□□ -1.28
CDH13-210ENST00000567445 RAB27BO00194 218 aa7.03□□□□□ -1.28
CDH13-210ENST00000567445 LDLRAD4O15165 306 aa7.03□□□□□ -1.28
CDH13-210ENST00000567445 FABP7O15540 132 aa7.03□□□□□ -1.28
CDH13-210ENST00000567445 DENRO43583 198 aaKnown RBP7.03□□□□□ -1.28
CDH13-210ENST00000567445 RGS10O43665 173 aa7.03□□□□□ -1.28
CDH13-210ENST00000567445 LYL1P12980 280 aa7.03□□□□□ -1.28
CDH13-210ENST00000567445 LGALS7P47929 136 aa7.03□□□□□ -1.28
CDH13-210ENST00000567445 PSMD7P51665 324 aa7.03□□□□□ -1.28
CDH13-210ENST00000567445 UCP3P55916 312 aa7.03□□□□□ -1.28
CDH13-210ENST00000567445 SSBP2P81877 361 aaPredicted RBP7.03□□□□□ -1.28
CDH13-210ENST00000567445 MRPS15P82914 257 aaKnown RBP7.03□□□□□ -1.28
CDH13-210ENST00000567445 PJVKQ0ZLH3 352 aa7.03□□□□□ -1.28
CDH13-210ENST00000567445 MLLT11Q13015 90 aaPredicted RBP7.03□□□□□ -1.28
CDH13-210ENST00000567445 KRTAP19-4Q3LI73 84 aa7.03□□□□□ -1.28
CDH13-210ENST00000567445 MOGAT2Q3SYC2 334 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms