RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 AUP1Q9Y679 476 aa24.76■■□□□ 1.55
CTCF-203ENST00000566078 GAPDHP04406 335 aaKnown RBP24.75■■□□□ 1.55
CTCF-203ENST00000566078 IGHV4-31P0DP07 118 aa24.75■■□□□ 1.55
CTCF-203ENST00000566078 RTL8BQ17RB0 113 aa24.75■■□□□ 1.55
CTCF-203ENST00000566078 NMSQ5H8A3 153 aa24.75■■□□□ 1.55
CTCF-203ENST00000566078 TPTE2P1Q5T6R2 138 aa24.75■■□□□ 1.55
CTCF-203ENST00000566078 LHFPL4Q7Z7J7 247 aa24.75■■□□□ 1.55
CTCF-203ENST00000566078 NMES1Q9C002 83 aa24.75■■□□□ 1.55
CTCF-203ENST00000566078 A0A0G2JRQ6 117 aa24.75■■□□□ 1.55
CTCF-203ENST00000566078 H0YJW9 148 aa24.75■■□□□ 1.55
CTCF-203ENST00000566078 TXNL1O43396 289 aa24.75■■□□□ 1.55
CTCF-203ENST00000566078 CRYZL1O95825 349 aa24.75■■□□□ 1.55
CTCF-203ENST00000566078 GATA3P23771 443 aa24.75■■□□□ 1.55
CTCF-203ENST00000566078 CEACAM3P40198 252 aa24.75■■□□□ 1.55
CTCF-203ENST00000566078 OR5AN1Q8NGI8 311 aa24.75■■□□□ 1.55
CTCF-203ENST00000566078 RANBP3Q9H6Z4 567 aaPredicted RBP24.75■■□□□ 1.55
CTCF-203ENST00000566078 C7orf69Q9H7B7 122 aa24.75■■□□□ 1.55
CTCF-203ENST00000566078 PLEKHA2Q9HB19 425 aa24.75■■□□□ 1.55
CTCF-203ENST00000566078 AKAP9Q99996 3911 aa24.75■■□□□ 1.55
CTCF-203ENST00000566078 ATG12O94817 140 aa24.74■■□□□ 1.55
CTCF-203ENST00000566078 G6PCP35575 357 aa24.74■■□□□ 1.55
CTCF-203ENST00000566078 LGALS4P56470 323 aa24.74■■□□□ 1.55
CTCF-203ENST00000566078 ZFP69Q49AA0 526 aa24.74■■□□□ 1.55
CTCF-203ENST00000566078 LSM10Q969L4 123 aaKnown RBP24.74■■□□□ 1.55
CTCF-203ENST00000566078 RBMXL1Q96E39 390 aaKnown RBP24.74■■□□□ 1.55
CTCF-203ENST00000566078 RRNAD1Q96FB5 475 aaKnown RBP24.74■■□□□ 1.55
CTCF-203ENST00000566078 GSKIPQ9P0R6 139 aa24.74■■□□□ 1.55
CTCF-203ENST00000566078 KRASP01116 189 aa24.73■■□□□ 1.55
CTCF-203ENST00000566078 EPHA1P21709 976 aa24.73■■□□□ 1.55
CTCF-203ENST00000566078 CYCSP99999 105 aaKnown RBP24.73■■□□□ 1.55
CTCF-203ENST00000566078 TAGLNQ01995 201 aaKnown RBP24.73■■□□□ 1.55
CTCF-203ENST00000566078 ZBTB8BQ8NAP8 495 aaPredicted RBP24.73■■□□□ 1.55
CTCF-203ENST00000566078 R3HDM4Q96D70 268 aa24.73■■□□□ 1.55
CTCF-203ENST00000566078 SPIN2AQ99865 258 aa24.73■■□□□ 1.55
CTCF-203ENST00000566078 SPIN2BQ9BPZ2 258 aa24.73■■□□□ 1.55
CTCF-203ENST00000566078 COMMD9Q9P000 198 aa24.73■■□□□ 1.55
CTCF-203ENST00000566078 CREBBPQ92793 2442 aa24.73■■□□□ 1.55
CTCF-203ENST00000566078 IGHV1-3A0A0C4DH29 117 aa24.72■■□□□ 1.55
CTCF-203ENST00000566078 H7C2Y5 167 aa24.72■■□□□ 1.55
CTCF-203ENST00000566078 DHRS7BQ6IAN0 325 aaPredicted RBP24.72■■□□□ 1.55
CTCF-203ENST00000566078 GPR146Q96CH1 333 aa24.72■■□□□ 1.55
CTCF-203ENST00000566078 HILPDAQ9Y5L2 63 aa24.72■■□□□ 1.55
CTCF-203ENST00000566078 CENPVL3A0A0U1RRI6 287 aa24.72■■□□□ 1.55
CTCF-203ENST00000566078 MARCH11A6NNE9 402 aa24.72■■□□□ 1.55
CTCF-203ENST00000566078 TGFAP01135 160 aa24.72■■□□□ 1.55
CTCF-203ENST00000566078 RRASP10301 218 aa24.72■■□□□ 1.55
CTCF-203ENST00000566078 GZMKP49863 264 aa24.72■■□□□ 1.55
CTCF-203ENST00000566078 Q5BKY6 102 aa24.72■■□□□ 1.55
CTCF-203ENST00000566078 MINOS1Q5TGZ0 78 aa24.72■■□□□ 1.55
CTCF-203ENST00000566078 THOC7Q6I9Y2 204 aaKnown RBP24.72■■□□□ 1.55
CTCF-203ENST00000566078 MOB3BQ86TA1 216 aa24.72■■□□□ 1.55
CTCF-203ENST00000566078 TBL2Q9Y4P3 447 aaKnown RBP24.72■■□□□ 1.55
CTCF-203ENST00000566078 MINOS1-NBL1R4GNA1 71 aa24.72■■□□□ 1.55
CTCF-203ENST00000566078 ZANQ9Y493 2812 aa24.71■■□□□ 1.55
CTCF-203ENST00000566078 G3V3Q6 166 aa24.71■■□□□ 1.55
CTCF-203ENST00000566078 C1QBP02746 253 aa24.71■■□□□ 1.55
CTCF-203ENST00000566078 IGKV1-16P04430 117 aa24.71■■□□□ 1.55
CTCF-203ENST00000566078 IZUMO4Q1ZYL8 232 aa24.71■■□□□ 1.55
CTCF-203ENST00000566078 LRRC37A5PQ49AS3 106 aa24.71■■□□□ 1.55
CTCF-203ENST00000566078 PDPNQ86YL7 162 aa24.71■■□□□ 1.55
CTCF-203ENST00000566078 PPP1R1CQ8WVI7 109 aa24.71■■□□□ 1.55
CTCF-203ENST00000566078 WASHC3Q9Y3C0 194 aa24.71■■□□□ 1.55
CTCF-203ENST00000566078 TRAV40A0A0B4J280 105 aa24.7■■□□□ 1.54
CTCF-203ENST00000566078 A0A1W2PPI3 338 aa24.7■■□□□ 1.54
CTCF-203ENST00000566078 NQO2P16083 231 aa24.7■■□□□ 1.54
CTCF-203ENST00000566078 MMP24Q9Y5R2 645 aa24.7■■□□□ 1.54
CTCF-203ENST00000566078 IGHV3-72A0A0B4J1Y9 119 aa24.69■■□□□ 1.54
CTCF-203ENST00000566078 RAB13P51153 203 aa24.69■■□□□ 1.54
CTCF-203ENST00000566078 FAM219AQ8IW50 185 aa24.69■■□□□ 1.54
CTCF-203ENST00000566078 DMBX1Q8NFW5 382 aa24.69■■□□□ 1.54
CTCF-203ENST00000566078 NPFFO15130 113 aa24.68■■□□□ 1.54
CTCF-203ENST00000566078 MC5RP33032 325 aa24.68■■□□□ 1.54
CTCF-203ENST00000566078 ERVK-16P61578 105 aa24.68■■□□□ 1.54
CTCF-203ENST00000566078 SSX9Q7RTT3 188 aa24.68■■□□□ 1.54
CTCF-203ENST00000566078 IGHV3OR16-10A0A075B7F0 116 aa24.68■■□□□ 1.54
CTCF-203ENST00000566078 SCGB1D2O95969 90 aa24.68■■□□□ 1.54
CTCF-203ENST00000566078 P0C879 139 aa24.68■■□□□ 1.54
CTCF-203ENST00000566078 SAA4P35542 130 aa24.68■■□□□ 1.54
CTCF-203ENST00000566078 EIF2B2P49770 351 aaKnown RBP24.68■■□□□ 1.54
CTCF-203ENST00000566078 IL15RAQ13261 267 aa24.68■■□□□ 1.54
CTCF-203ENST00000566078 MIDNQ504T8 468 aa24.68■■□□□ 1.54
CTCF-203ENST00000566078 H2BFWTQ7Z2G1 175 aa24.68■■□□□ 1.54
CTCF-203ENST00000566078 VKORC1L1Q8N0U8 176 aa24.68■■□□□ 1.54
CTCF-203ENST00000566078 OR8H3Q8N146 312 aa24.68■■□□□ 1.54
CTCF-203ENST00000566078 C17orf50Q8WW18 174 aa24.68■■□□□ 1.54
CTCF-203ENST00000566078 CACNG5Q9UF02 275 aa24.68■■□□□ 1.54
CTCF-203ENST00000566078 A0A1B0GU03 582 aa24.67■■□□□ 1.54
CTCF-203ENST00000566078 J3QLI3 93 aa24.67■■□□□ 1.54
CTCF-203ENST00000566078 PAX6P26367 422 aa24.67■■□□□ 1.54
CTCF-203ENST00000566078 SMCO1Q147U7 214 aa24.67■■□□□ 1.54
CTCF-203ENST00000566078 SSX2Q16385 188 aa24.67■■□□□ 1.54
CTCF-203ENST00000566078 NOXA1Q86UR1 476 aa24.67■■□□□ 1.54
CTCF-203ENST00000566078 CIARTQ8N365 385 aaPredicted RBP24.67■■□□□ 1.54
CTCF-203ENST00000566078 TRAV14DV4A0A0A6YYC5 116 aa24.66■■□□□ 1.54
CTCF-203ENST00000566078 IGHV1-69DA0A0B4J2H0 117 aa24.66■■□□□ 1.54
CTCF-203ENST00000566078 HRASP01112 189 aa24.66■■□□□ 1.54
CTCF-203ENST00000566078 IGHV1-69P01742 117 aa24.66■■□□□ 1.54
CTCF-203ENST00000566078 SLC25A6P12236 298 aa24.66■■□□□ 1.54
CTCF-203ENST00000566078 S100A10P60903 97 aa24.66■■□□□ 1.54
CTCF-203ENST00000566078 FGL1Q08830 312 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms