RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 IGF1P05019 195 aa16.63■□□□□ 0.25
SHCBP1-205ENST00000566016 TSPAN5P62079 268 aa16.63■□□□□ 0.25
SHCBP1-205ENST00000566016 PSG5Q15238 335 aa16.63■□□□□ 0.25
SHCBP1-205ENST00000566016 LIN54Q6MZP7 749 aa16.63■□□□□ 0.25
SHCBP1-205ENST00000566016 SGMS2Q8NHU3 365 aa16.63■□□□□ 0.25
SHCBP1-205ENST00000566016 HARBI1Q96MB7 349 aa16.63■□□□□ 0.25
SHCBP1-205ENST00000566016 TAS2R8Q9NYW2 309 aa16.63■□□□□ 0.25
SHCBP1-205ENST00000566016 FBXO24O75426 580 aa16.62■□□□□ 0.25
SHCBP1-205ENST00000566016 PTBP1P26599 531 aaKnown RBP eCLIP16.62■□□□□ 0.25
SHCBP1-205ENST00000566016 GNRHRP30968 328 aa16.62■□□□□ 0.25
SHCBP1-205ENST00000566016 RPL30P62888 115 aaKnown RBP16.62■□□□□ 0.25
SHCBP1-205ENST00000566016 ZNF818PQ6ZRF7 136 aa16.62■□□□□ 0.25
SHCBP1-205ENST00000566016 CENPVQ7Z7K6 275 aaPredicted RBP16.62■□□□□ 0.25
SHCBP1-205ENST00000566016 STPG2Q8N412 459 aa16.62■□□□□ 0.25
SHCBP1-205ENST00000566016 MFSD4AQ8N468 514 aa16.62■□□□□ 0.25
SHCBP1-205ENST00000566016 GON7Q9BXV9 100 aa16.62■□□□□ 0.25
SHCBP1-205ENST00000566016 FXYD6Q9H0Q3 95 aa16.62■□□□□ 0.25
SHCBP1-205ENST00000566016 FBXL15Q9H469 300 aa16.62■□□□□ 0.25
SHCBP1-205ENST00000566016 M0QYG6 137 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 SHOXO15266 292 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 CRYZL1O95825 349 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 IGLV2-23P01705 113 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 CSF1P09603 554 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 ETV6P41212 452 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 KIR2DS2P43631 304 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 CATR1Q13166 79 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 CCDC190Q86UF4 302 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 OR5AU1Q8NGC0 362 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 OR4S2Q8NH73 311 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 TCTEX1D2Q8WW35 142 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 METTL1Q9UBP6 276 aaKnown RBP16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 V9GYH0 126 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 IGHV7-81A0A0B4J1V7 117 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 PSMB11A5LHX3 300 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 RBFOX2O43251 390 aaKnown RBP eCLIP16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 IFNA6P05013 189 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 UCP3P55916 312 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 PLGLAQ15195 96 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 STEAP1BQ6NZ63 245 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 LPCAT3Q6P1A2 487 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 LHFPL1Q86WI0 220 aa16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 NOL4LQ96MY1 436 aaPredicted RBP16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 TINAGL1Q9GZM7 467 aaPredicted RBP16.61■□□□□ 0.25
SHCBP1-205ENST00000566016 LINC01548A6NM66 108 aa16.6■□□□□ 0.25
SHCBP1-205ENST00000566016 SLC25A17O43808 307 aa16.6■□□□□ 0.25
SHCBP1-205ENST00000566016 FCGR3BO75015 233 aa16.6■□□□□ 0.25
SHCBP1-205ENST00000566016 SLC35B1P78383 322 aa16.6■□□□□ 0.25
SHCBP1-205ENST00000566016 MEF2DQ14814 521 aa16.6■□□□□ 0.25
SHCBP1-205ENST00000566016 AADACL3Q5VUY0 350 aa16.6■□□□□ 0.25
SHCBP1-205ENST00000566016 CMTM1Q8IZ96 169 aa16.6■□□□□ 0.25
SHCBP1-205ENST00000566016 OR4X2Q8NGF9 303 aa16.6■□□□□ 0.25
SHCBP1-205ENST00000566016 OR51J1Q9H342 316 aa16.6■□□□□ 0.25
SHCBP1-205ENST00000566016 M0QZ24 198 aa16.59■□□□□ 0.25
SHCBP1-205ENST00000566016 GPR31O00270 319 aa16.59■□□□□ 0.25
SHCBP1-205ENST00000566016 RAB3DO95716 219 aa16.59■□□□□ 0.25
SHCBP1-205ENST00000566016 CRYGBP07316 175 aa16.59■□□□□ 0.25
SHCBP1-205ENST00000566016 BRWD1-AS2P59051 145 aa16.59■□□□□ 0.25
SHCBP1-205ENST00000566016 UBE2KP61086 200 aa16.59■□□□□ 0.25
SHCBP1-205ENST00000566016 SPANXN2Q5MJ10 180 aa16.59■□□□□ 0.25
SHCBP1-205ENST00000566016 ZNF562Q6V9R5 426 aa16.59■□□□□ 0.25
SHCBP1-205ENST00000566016 PPP1R27Q86WC6 154 aa16.59■□□□□ 0.25
SHCBP1-205ENST00000566016 COMMD1Q8N668 190 aa16.59■□□□□ 0.25
SHCBP1-205ENST00000566016 OR6Q1Q8NGQ2 317 aa16.59■□□□□ 0.25
SHCBP1-205ENST00000566016 SRRM4A7MD48 611 aaKnown RBP16.58■□□□□ 0.24
SHCBP1-205ENST00000566016 TNFSF12O43508 249 aa16.58■□□□□ 0.24
SHCBP1-205ENST00000566016 CD28P10747 220 aa16.58■□□□□ 0.24
SHCBP1-205ENST00000566016 CRIP2P52943 208 aaPredicted RBP16.58■□□□□ 0.24
SHCBP1-205ENST00000566016 CX3CL1P78423 397 aa16.58■□□□□ 0.24
SHCBP1-205ENST00000566016 CD83Q01151 205 aa16.58■□□□□ 0.24
SHCBP1-205ENST00000566016 ZNF79Q15937 498 aa16.58■□□□□ 0.24
SHCBP1-205ENST00000566016 VMA21Q3ZAQ7 101 aa16.58■□□□□ 0.24
SHCBP1-205ENST00000566016 PRR31Q5SQ13 230 aa16.58■□□□□ 0.24
SHCBP1-205ENST00000566016 SLC38A6Q8IZM9 456 aa16.58■□□□□ 0.24
SHCBP1-205ENST00000566016 OR4D10Q8NGI6 311 aa16.58■□□□□ 0.24
SHCBP1-205ENST00000566016 CD300LFQ8TDQ1 290 aa16.58■□□□□ 0.24
SHCBP1-205ENST00000566016 RSRP1Q9BUV0 290 aa16.58■□□□□ 0.24
SHCBP1-205ENST00000566016 ANKRD20A5PA0PJZ0 165 aa16.57■□□□□ 0.24
SHCBP1-205ENST00000566016 ATP6V0E1O15342 81 aa16.57■□□□□ 0.24
SHCBP1-205ENST00000566016 AKAIN1P0CW23 69 aa16.57■□□□□ 0.24
SHCBP1-205ENST00000566016 NDPQ00604 133 aa16.57■□□□□ 0.24
SHCBP1-205ENST00000566016 CFHR3Q02985 330 aa16.57■□□□□ 0.24
SHCBP1-205ENST00000566016 C2orf68Q2NKX9 166 aa16.57■□□□□ 0.24
SHCBP1-205ENST00000566016 OR2B11Q5JQS5 317 aa16.57■□□□□ 0.24
SHCBP1-205ENST00000566016 NDUFA11Q86Y39 141 aa16.57■□□□□ 0.24
SHCBP1-205ENST00000566016 C11orf44Q8N8P7 122 aa16.57■□□□□ 0.24
SHCBP1-205ENST00000566016 TEX45Q8NA69 505 aa16.57■□□□□ 0.24
SHCBP1-205ENST00000566016 GPHA2Q96T91 129 aa16.57■□□□□ 0.24
SHCBP1-205ENST00000566016 TPSG1Q9NRR2 321 aa16.57■□□□□ 0.24
SHCBP1-205ENST00000566016 A6NHS1 94 aa16.56■□□□□ 0.24
SHCBP1-205ENST00000566016 FCN1O00602 326 aa16.56■□□□□ 0.24
SHCBP1-205ENST00000566016 VDAC1P21796 283 aa16.56■□□□□ 0.24
SHCBP1-205ENST00000566016 S100GP29377 79 aa16.56■□□□□ 0.24
SHCBP1-205ENST00000566016 TCTEX1D4Q5JR98 221 aa16.56■□□□□ 0.24
SHCBP1-205ENST00000566016 SPAG16Q8N0X2 631 aa16.56■□□□□ 0.24
SHCBP1-205ENST00000566016 TCTEX1D1Q8N7M0 179 aa16.56■□□□□ 0.24
SHCBP1-205ENST00000566016 TRIM63Q969Q1 353 aa16.56■□□□□ 0.24
SHCBP1-205ENST00000566016 ZNF486Q96H40 463 aaPredicted RBP16.56■□□□□ 0.24
SHCBP1-205ENST00000566016 LINC00527Q9UJ94 153 aa16.56■□□□□ 0.24
SHCBP1-205ENST00000566016 NBEAL1Q6ZS30 2694 aa16.56■□□□□ 0.24
SHCBP1-205ENST00000566016 CREBL2O60519 120 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms