RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 CTXN2P0C2S0 81 aa14.3□□□□□ -0.12
CLN6-204ENST00000564752 EGR2P11161 476 aaPredicted RBP14.3□□□□□ -0.12
CLN6-204ENST00000564752 TAGLNQ01995 201 aaKnown RBP14.3□□□□□ -0.12
CLN6-204ENST00000564752 ZNF562Q6V9R5 426 aa14.3□□□□□ -0.12
CLN6-204ENST00000564752 PPP1R27Q86WC6 154 aa14.3□□□□□ -0.12
CLN6-204ENST00000564752 TSPAN14Q8NG11 270 aa14.3□□□□□ -0.12
CLN6-204ENST00000564752 ARPC1AQ92747 370 aa14.3□□□□□ -0.12
CLN6-204ENST00000564752 SLC25A38Q96DW6 304 aa14.3□□□□□ -0.12
CLN6-204ENST00000564752 FAM103A1Q9BTL3 118 aaKnown RBP14.3□□□□□ -0.12
CLN6-204ENST00000564752 ALX4Q9H161 411 aaPredicted RBP14.3□□□□□ -0.12
CLN6-204ENST00000564752 NUBP2Q9Y5Y2 271 aa14.3□□□□□ -0.12
CLN6-204ENST00000564752 OVOL1O14753 267 aa14.29□□□□□ -0.12
CLN6-204ENST00000564752 RRASP10301 218 aa14.29□□□□□ -0.12
CLN6-204ENST00000564752 LGALS7P47929 136 aa14.29□□□□□ -0.12
CLN6-204ENST00000564752 ACTBL2Q562R1 376 aa14.29□□□□□ -0.12
CLN6-204ENST00000564752 UNQ5815/PRO19632Q6UWF5 114 aa14.29□□□□□ -0.12
CLN6-204ENST00000564752 BVESQ8NE79 360 aa14.29□□□□□ -0.12
CLN6-204ENST00000564752 GRPEL2Q8TAA5 225 aa14.29□□□□□ -0.12
CLN6-204ENST00000564752 DLX4Q92988 240 aaPredicted RBP14.29□□□□□ -0.12
CLN6-204ENST00000564752 ADTRPQ96IZ2 230 aa14.29□□□□□ -0.12
CLN6-204ENST00000564752 SMAD5-AS1Q9Y6J3 95 aa14.29□□□□□ -0.12
CLN6-204ENST00000564752 TRAV18A0A075B6X5 111 aa14.28□□□□□ -0.12
CLN6-204ENST00000564752 LINC01619G3V211 115 aa14.28□□□□□ -0.12
CLN6-204ENST00000564752 J3QRK9 145 aa14.28□□□□□ -0.12
CLN6-204ENST00000564752 SHOXO15266 292 aa14.28□□□□□ -0.12
CLN6-204ENST00000564752 AIREO43918 545 aa14.28□□□□□ -0.12
CLN6-204ENST00000564752 SSX5O60225 188 aa14.28□□□□□ -0.12
CLN6-204ENST00000564752 TMEM127O75204 238 aa14.28□□□□□ -0.12
CLN6-204ENST00000564752 LY86O95711 162 aa14.28□□□□□ -0.12
CLN6-204ENST00000564752 NFYAP23511 347 aaPredicted RBP14.28□□□□□ -0.12
CLN6-204ENST00000564752 PYHIN1Q6K0P9 492 aa14.28□□□□□ -0.12
CLN6-204ENST00000564752 CNIH2Q6PI25 160 aa14.28□□□□□ -0.12
CLN6-204ENST00000564752 ZNF645Q8N7E2 425 aa14.28□□□□□ -0.12
CLN6-204ENST00000564752 LFNGQ8NES3 379 aa14.28□□□□□ -0.12
CLN6-204ENST00000564752 SORL1Q92673 2214 aa14.28□□□□□ -0.12
CLN6-204ENST00000564752 ANXA10Q9UJ72 324 aa14.28□□□□□ -0.12
CLN6-204ENST00000564752 OR2W1Q9Y3N9 320 aa14.28□□□□□ -0.12
CLN6-204ENST00000564752 A0A0A6YYH2 397 aa14.27□□□□□ -0.13
CLN6-204ENST00000564752 A6NJ64 397 aa14.27□□□□□ -0.13
CLN6-204ENST00000564752 IGLV2-23P01705 113 aa14.27□□□□□ -0.13
CLN6-204ENST00000564752 CD40LGP29965 261 aa14.27□□□□□ -0.13
CLN6-204ENST00000564752 DUTP33316 252 aaKnown RBP14.27□□□□□ -0.13
CLN6-204ENST00000564752 TGFBR1P36897 503 aa14.27□□□□□ -0.13
CLN6-204ENST00000564752 FXYD3Q14802 87 aa14.27□□□□□ -0.13
CLN6-204ENST00000564752 AKIRIN2Q53H80 203 aa14.27□□□□□ -0.13
CLN6-204ENST00000564752 TMEM177Q53S58 311 aa14.27□□□□□ -0.13
CLN6-204ENST00000564752 CROCCP3Q8IVE0 287 aa14.27□□□□□ -0.13
CLN6-204ENST00000564752 CASTOR1Q8WTX7 329 aa14.27□□□□□ -0.13
CLN6-204ENST00000564752 YIPF6Q96EC8 236 aa14.27□□□□□ -0.13
CLN6-204ENST00000564752 DIABLOQ9NR28 239 aa14.27□□□□□ -0.13
CLN6-204ENST00000564752 SPATA2Q9UM82 520 aa14.27□□□□□ -0.13
CLN6-204ENST00000564752 SAP30O75446 220 aa14.26□□□□□ -0.13
CLN6-204ENST00000564752 CNIH1O95406 144 aa14.26□□□□□ -0.13
CLN6-204ENST00000564752 LGALS1P09382 135 aaKnown RBP14.26□□□□□ -0.13
CLN6-204ENST00000564752 SLURP1P55000 103 aa14.26□□□□□ -0.13
CLN6-204ENST00000564752 ARPC4P59998 168 aa14.26□□□□□ -0.13
CLN6-204ENST00000564752 LSM3P62310 102 aaKnown RBP14.26□□□□□ -0.13
CLN6-204ENST00000564752 DDB2Q92466 427 aa14.26□□□□□ -0.13
CLN6-204ENST00000564752 IGHV4OR15-8A0A075B7B6 117 aa14.25□□□□□ -0.13
CLN6-204ENST00000564752 A0A087WW49 117 aa14.25□□□□□ -0.13
CLN6-204ENST00000564752 LINC00473A8K010 186 aa14.25□□□□□ -0.13
CLN6-204ENST00000564752 ARPC1BO15143 372 aaKnown RBP14.25□□□□□ -0.13
CLN6-204ENST00000564752 SLC22A5O76082 557 aa14.25□□□□□ -0.13
CLN6-204ENST00000564752 CRYZL1O95825 349 aa14.25□□□□□ -0.13
CLN6-204ENST00000564752 HLA-DQB1P01920 261 aa14.25□□□□□ -0.13
CLN6-204ENST00000564752 CRYGBP07316 175 aa14.25□□□□□ -0.13
CLN6-204ENST00000564752 TPPP2P59282 170 aa14.25□□□□□ -0.13
CLN6-204ENST00000564752 VMA21Q3ZAQ7 101 aa14.25□□□□□ -0.13
CLN6-204ENST00000564752 KCTD9Q7L273 389 aa14.25□□□□□ -0.13
CLN6-204ENST00000564752 BEST4Q8NFU0 473 aa14.25□□□□□ -0.13
CLN6-204ENST00000564752 C3orf84H3BNL1 204 aa14.24□□□□□ -0.13
CLN6-204ENST00000564752 SPNP16150 400 aa14.24□□□□□ -0.13
CLN6-204ENST00000564752 PJVKQ0ZLH3 352 aa14.24□□□□□ -0.13
CLN6-204ENST00000564752 ACSM6Q6P461 480 aa14.24□□□□□ -0.13
CLN6-204ENST00000564752 SBSPONQ8IVN8 264 aa14.24□□□□□ -0.13
CLN6-204ENST00000564752 OSR1Q8TAX0 266 aaPredicted RBP14.24□□□□□ -0.13
CLN6-204ENST00000564752 RHOVQ96L33 236 aa14.24□□□□□ -0.13
CLN6-204ENST00000564752 MS4A10Q96PG2 267 aa14.24□□□□□ -0.13
CLN6-204ENST00000564752 SLA2Q9H6Q3 261 aa14.24□□□□□ -0.13
CLN6-204ENST00000564752 AUNIPQ9H7T9 357 aa14.24□□□□□ -0.13
CLN6-204ENST00000564752 MRPS7Q9Y2R9 242 aaKnown RBP14.24□□□□□ -0.13
CLN6-204ENST00000564752 RBMX2Q9Y388 322 aaKnown RBP14.24□□□□□ -0.13
CLN6-204ENST00000564752 PRELID3BQ9Y3B1 194 aa14.24□□□□□ -0.13
CLN6-204ENST00000564752 IGKV1D-13A0A0B4J2D9 117 aa14.23□□□□□ -0.13
CLN6-204ENST00000564752 SRRM4A7MD48 611 aaKnown RBP14.23□□□□□ -0.13
CLN6-204ENST00000564752 TUSC2O75896 110 aa14.23□□□□□ -0.13
CLN6-204ENST00000564752 HSPB1P04792 205 aaKnown RBP14.23□□□□□ -0.13
CLN6-204ENST00000564752 IGKV1-13P0DP09 117 aa14.23□□□□□ -0.13
CLN6-204ENST00000564752 UBE2KP61086 200 aa14.23□□□□□ -0.13
CLN6-204ENST00000564752 SSBP2P81877 361 aaPredicted RBP14.23□□□□□ -0.13
CLN6-204ENST00000564752 UBE2NLQ5JXB2 153 aa14.23□□□□□ -0.13
CLN6-204ENST00000564752 HOGA1Q86XE5 327 aa14.23□□□□□ -0.13
CLN6-204ENST00000564752 GVQW1Q8N7I0 195 aa14.23□□□□□ -0.13
CLN6-204ENST00000564752 ZNF355PQ9NSJ1 428 aa14.23□□□□□ -0.13
CLN6-204ENST00000564752 FCGR3BO75015 233 aa14.22□□□□□ -0.13
CLN6-204ENST00000564752 IGHV3-11P01762 117 aa14.22□□□□□ -0.13
CLN6-204ENST00000564752 TRGV3P03979 118 aa14.22□□□□□ -0.13
CLN6-204ENST00000564752 GP9P14770 177 aa14.22□□□□□ -0.13
CLN6-204ENST00000564752 RPS19P39019 145 aaKnown RBP14.22□□□□□ -0.13
CLN6-204ENST00000564752 OR2B11Q5JQS5 317 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms