RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 GRPEL2Q8TAA5 225 aa9.37□□□□□ -0.91
GTF3C1-204ENST00000564664 CASTOR1Q8WTX7 329 aa9.37□□□□□ -0.91
GTF3C1-204ENST00000564664 ASCL2Q99929 193 aa9.37□□□□□ -0.91
GTF3C1-204ENST00000564664 DCSTAMPQ9H295 470 aa9.37□□□□□ -0.91
GTF3C1-204ENST00000564664 RAB26Q9ULW5 256 aa9.37□□□□□ -0.91
GTF3C1-204ENST00000564664 RBM7Q9Y580 266 aaKnown RBP9.37□□□□□ -0.91
GTF3C1-204ENST00000564664 A8MZ25 164 aa9.36□□□□□ -0.91
GTF3C1-204ENST00000564664 CREBL2O60519 120 aaPredicted RBP9.36□□□□□ -0.91
GTF3C1-204ENST00000564664 SCGNO76038 276 aa9.36□□□□□ -0.91
GTF3C1-204ENST00000564664 GABARAPL2P60520 117 aa9.36□□□□□ -0.91
GTF3C1-204ENST00000564664 UBE2KP61086 200 aa9.36□□□□□ -0.91
GTF3C1-204ENST00000564664 ARFRP1Q13795 201 aa9.36□□□□□ -0.91
GTF3C1-204ENST00000564664 KLF5Q13887 457 aaPredicted RBP9.36□□□□□ -0.91
GTF3C1-204ENST00000564664 TPRA1Q86W33 373 aa9.36□□□□□ -0.91
GTF3C1-204ENST00000564664 ANKRD13BQ86YJ7 626 aa9.36□□□□□ -0.91
GTF3C1-204ENST00000564664 H1FOOQ8IZA3 346 aaPredicted RBP9.36□□□□□ -0.91
GTF3C1-204ENST00000564664 BVESQ8NE79 360 aa9.36□□□□□ -0.91
GTF3C1-204ENST00000564664 OSR1Q8TAX0 266 aaPredicted RBP9.36□□□□□ -0.91
GTF3C1-204ENST00000564664 CNBD2Q96M20 576 aa9.36□□□□□ -0.91
GTF3C1-204ENST00000564664 HARBI1Q96MB7 349 aa9.36□□□□□ -0.91
GTF3C1-204ENST00000564664 TINAGL1Q9GZM7 467 aaPredicted RBP9.36□□□□□ -0.91
GTF3C1-204ENST00000564664 ZMAT4Q9H898 229 aa9.36□□□□□ -0.91
GTF3C1-204ENST00000564664 SRRM4A7MD48 611 aaKnown RBP9.35□□□□□ -0.91
GTF3C1-204ENST00000564664 H0Y980 276 aa9.35□□□□□ -0.91
GTF3C1-204ENST00000564664 IGLV1-51P01701 117 aa9.35□□□□□ -0.91
GTF3C1-204ENST00000564664 FGF9P31371 208 aaPredicted RBP9.35□□□□□ -0.91
GTF3C1-204ENST00000564664 DUTP33316 252 aaKnown RBP9.35□□□□□ -0.91
GTF3C1-204ENST00000564664 OR10A3P58181 314 aa9.35□□□□□ -0.91
GTF3C1-204ENST00000564664 SSBP2P81877 361 aaPredicted RBP9.35□□□□□ -0.91
GTF3C1-204ENST00000564664 PLA2G7Q13093 441 aa9.35□□□□□ -0.91
GTF3C1-204ENST00000564664 FAM209BQ5JX69 171 aa9.35□□□□□ -0.91
GTF3C1-204ENST00000564664 ZNF343Q6P1L6 599 aa9.35□□□□□ -0.91
GTF3C1-204ENST00000564664 IZUMO2Q6UXV1 221 aa9.35□□□□□ -0.91
GTF3C1-204ENST00000564664 SBSPONQ8IVN8 264 aa9.35□□□□□ -0.91
GTF3C1-204ENST00000564664 DDB2Q92466 427 aa9.35□□□□□ -0.91
GTF3C1-204ENST00000564664 YTHDF1Q9BYJ9 559 aaKnown RBP9.35□□□□□ -0.91
GTF3C1-204ENST00000564664 ATG5Q9H1Y0 275 aa9.35□□□□□ -0.91
GTF3C1-204ENST00000564664 SIGLEC8Q9NYZ4 499 aa9.35□□□□□ -0.91
GTF3C1-204ENST00000564664 PEF1Q9UBV8 284 aaKnown RBP9.35□□□□□ -0.91
GTF3C1-204ENST00000564664 A0A075B6Q4 140 aa9.34□□□□□ -0.91
GTF3C1-204ENST00000564664 SHISA3A0PJX4 238 aa9.34□□□□□ -0.91
GTF3C1-204ENST00000564664 MSGN1A6NI15 193 aa9.34□□□□□ -0.91
GTF3C1-204ENST00000564664 NOTOA8MTQ0 251 aa9.34□□□□□ -0.91
GTF3C1-204ENST00000564664 FRMD6-AS1P0C7T7 363 aa9.34□□□□□ -0.91
GTF3C1-204ENST00000564664 PJVKQ0ZLH3 352 aa9.34□□□□□ -0.91
GTF3C1-204ENST00000564664 PRSS8Q16651 343 aa9.34□□□□□ -0.91
GTF3C1-204ENST00000564664 CDNFQ49AH0 187 aa9.34□□□□□ -0.91
GTF3C1-204ENST00000564664 UBE2UQ5VVX9 321 aa9.34□□□□□ -0.91
GTF3C1-204ENST00000564664 HACD4Q5VWC8 232 aa9.34□□□□□ -0.91
GTF3C1-204ENST00000564664 FCGR1BQ92637 280 aa9.34□□□□□ -0.91
GTF3C1-204ENST00000564664 SNAPC3Q92966 411 aa9.34□□□□□ -0.91
GTF3C1-204ENST00000564664 PHB2Q99623 299 aa9.34□□□□□ -0.91
GTF3C1-204ENST00000564664 ZNF230Q9UIE0 474 aaPredicted RBP9.34□□□□□ -0.91
GTF3C1-204ENST00000564664 PRELID3BQ9Y3B1 194 aa9.34□□□□□ -0.91
GTF3C1-204ENST00000564664 OR2W1Q9Y3N9 320 aa9.34□□□□□ -0.91
GTF3C1-204ENST00000564664 TNCP24821 2201 aa9.33□□□□□ -0.92
GTF3C1-204ENST00000564664 AIREO43918 545 aa9.33□□□□□ -0.92
GTF3C1-204ENST00000564664 ACTL6BO94805 426 aa9.33□□□□□ -0.92
GTF3C1-204ENST00000564664 HLA-DQB1P01920 261 aa9.33□□□□□ -0.92
GTF3C1-204ENST00000564664 OR9G9P0C7N8 305 aa9.33□□□□□ -0.92
GTF3C1-204ENST00000564664 C22orf42Q6IC83 251 aa9.33□□□□□ -0.92
GTF3C1-204ENST00000564664 CNIH2Q6PI25 160 aa9.33□□□□□ -0.92
GTF3C1-204ENST00000564664 SLC25A42Q86VD7 318 aa9.33□□□□□ -0.92
GTF3C1-204ENST00000564664 SGPP2Q8IWX5 399 aa9.33□□□□□ -0.92
GTF3C1-204ENST00000564664 MMD2Q8IY49 270 aa9.33□□□□□ -0.92
GTF3C1-204ENST00000564664 ZNF645Q8N7E2 425 aa9.33□□□□□ -0.92
GTF3C1-204ENST00000564664 OR9G4Q8NGQ1 327 aa9.33□□□□□ -0.92
GTF3C1-204ENST00000564664 RCHY1Q96PM5 261 aa9.33□□□□□ -0.92
GTF3C1-204ENST00000564664 SPIN2AQ99865 258 aa9.33□□□□□ -0.92
GTF3C1-204ENST00000564664 SPIN2BQ9BPZ2 258 aa9.33□□□□□ -0.92
GTF3C1-204ENST00000564664 COA4Q9NYJ1 87 aa9.33□□□□□ -0.92
GTF3C1-204ENST00000564664 ANKRD34BA5PLL1 514 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 FAM223BA6NKX1 122 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 CRYZL1O95825 349 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 SNRPBP14678 240 aaKnown RBP9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 CD36P16671 472 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 SCAND1P57086 179 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 CDK10Q15131 360 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 MRGPRG-AS1Q2M3A8 158 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 OVCH2Q7RTZ1 564 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 FAM223AQ8IWN6 122 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 SPARTQ8N0X7 666 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 Q8N1Y9 231 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 TTC9CQ8N5M4 171 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 ADAD2Q8NCV1 583 aaKnown RBP9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 OR2K2Q8NGT1 345 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 VSTM2AQ8TAG5 236 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 MUC7Q8TAX7 377 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 MAFIPQ8WZ33 124 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 C5orf30Q96GV9 206 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 HSD17B10Q99714 261 aaKnown RBP9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 ST6GALNAC5Q9BVH7 336 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 Q9H521 79 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 C19orf73Q9NVV2 129 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 TXNL4BQ9NX01 149 aaKnown RBP9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 PEMTQ9UBM1 199 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 SSR3Q9UNL2 185 aa9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 MRPS7Q9Y2R9 242 aaKnown RBP9.32□□□□□ -0.92
GTF3C1-204ENST00000564664 TRBV9A0A0B4J1U6 114 aa9.31□□□□□ -0.92
GTF3C1-204ENST00000564664 A0A0B4J203 849 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms