RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 DNAL1Q4LDG9 190 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 OR4A47Q6IF82 309 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 GPHB5Q86YW7 130 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 KIR2DL5AQ8N109 375 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 OR2C3Q8N628 320 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 OR52I1Q8NGK6 324 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 KIR2DL5BQ8NHK3 375 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 RARRES2Q99969 163 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 FBXL7Q9UJT9 491 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 TRBV5-5A0A0J9YX44 114 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 SRRM4A7MD48 611 aaKnown RBP5.41□□□□□ -1.54
VPS4A-203ENST00000564399 DYNC1I1O14576 645 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 NAPSAO96009 420 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 LIMS3P0CW19 117 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 LIMS4P0CW20 117 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 FCGR2BP31994 310 aaPredicted RBP5.41□□□□□ -1.54
VPS4A-203ENST00000564399 HLA-DRB3P79483 266 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 PRSS8Q16651 343 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 RTL8BQ17RB0 113 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 ZNF585BQ52M93 769 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 TMEM177Q53S58 311 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 OR2G6Q5TZ20 316 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 GLT8D1Q68CQ7 371 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 OR10K2Q6IF99 312 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 CLEC19AQ6UXS0 136 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 TMPRSS11AQ6ZMR5 421 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 IDO2Q6ZQW0 420 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 SLC25A42Q86VD7 318 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 CDH26Q8IXH8 852 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 GVQW1Q8N7I0 195 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 TEX45Q8NA69 505 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 CCDC197Q8NCU1 140 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 PTX4Q96A99 478 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 SMIM19Q96E16 107 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 CENPNQ96H22 339 aaPredicted RBP5.41□□□□□ -1.54
VPS4A-203ENST00000564399 Q96MT0 163 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 SPIN2AQ99865 258 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 SPIN2BQ9BPZ2 258 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 RIMS4Q9H426 269 aaPredicted RBP5.41□□□□□ -1.54
VPS4A-203ENST00000564399 PLEKHJ1Q9NW61 149 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 APLNQ9ULZ1 77 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 RPL36Q9Y3U8 105 aaKnown RBP5.41□□□□□ -1.54
VPS4A-203ENST00000564399 DMRT1Q9Y5R6 373 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 S4R3C0 116 aa5.41□□□□□ -1.54
VPS4A-203ENST00000564399 DPPA5A6NC42 116 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 A8MWP6 167 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 DEFB4AO15263 64 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 OGG1O15527 345 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 SCTP09683 121 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 GSTT2P0CG29 244 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 GSTT2BP0CG30 244 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 RRASP10301 218 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 ETV1P50549 477 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 MFAP2P55001 183 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 UBE2KP61086 200 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 TAGLNQ01995 201 aaKnown RBP5.4□□□□□ -1.54
VPS4A-203ENST00000564399 MRGPRG-AS1Q2M3A8 158 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 YIF1BQ5BJH7 314 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 ZNF880Q6PDB4 577 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 TTC9CQ8N5M4 171 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.4□□□□□ -1.54
VPS4A-203ENST00000564399 OR5B3Q8NH48 314 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 MARC2Q969Z3 335 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 GALNT14Q96FL9 552 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 SPAG8Q99932 426 aaPredicted RBP5.4□□□□□ -1.54
VPS4A-203ENST00000564399 TMEM59Q9BXS4 323 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 C6orf62Q9GZU0 229 aaPredicted RBP5.4□□□□□ -1.54
VPS4A-203ENST00000564399 OR2D2Q9H210 308 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 MAP6D1Q9H9H5 199 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 BABAM2Q9NXR7 383 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 RDH8Q9NYR8 311 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 GHRLQ9UBU3 117 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 MGAT4AQ9UM21 535 aa5.4□□□□□ -1.54
VPS4A-203ENST00000564399 TRBV5-7A0A0A0MS05 114 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 TRBV6-6A0A0A6YYG2 114 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 HMX3A6NHT5 357 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 MPTX1A8MV57 137 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 CREBL2O60519 120 aaPredicted RBP5.39□□□□□ -1.55
VPS4A-203ENST00000564399 CRYZL1O95825 349 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 ALPLP05186 524 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 UBBP0CG47 229 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 GABRB1P18505 474 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 HTR2CP28335 458 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 RPS11P62280 158 aaKnown RBP eCLIP5.39□□□□□ -1.55
VPS4A-203ENST00000564399 RPS27AP62979 156 aaKnown RBP5.39□□□□□ -1.55
VPS4A-203ENST00000564399 MED21Q13503 144 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 TPBGQ13641 420 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 ODF3L2Q3SX64 289 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 C10orf55Q5SWW7 151 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 LAMTOR1Q6IAA8 161 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 C19orf35Q6ZS72 473 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 MMD2Q8IY49 270 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 NKAIN3Q8N8D7 197 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 ZFP41Q8N8Y5 198 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 OR11H2Q8NH07 326 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 OR4A5Q8NH83 315 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 RHOXF1Q8NHV9 184 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 GGHQ92820 318 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 EEF1AKMT3Q96AZ1 226 aa5.39□□□□□ -1.55
VPS4A-203ENST00000564399 CCDC140Q96MF4 163 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms