RNA–Protein interactions for RNA: ENST00000564079.5

TUBGCP4-208, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TUBGCP4, Length 6,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-208ENST00000564079 TMEM127O75204 238 aa10.28□□□□□ -0.76
TUBGCP4-208ENST00000564079 MPC2O95563 127 aa10.28□□□□□ -0.76
TUBGCP4-208ENST00000564079 RPL35AP18077 110 aaKnown RBP10.28□□□□□ -0.76
TUBGCP4-208ENST00000564079 RIPPLY2Q5TAB7 128 aa10.28□□□□□ -0.76
TUBGCP4-208ENST00000564079 VWCEQ96DN2 955 aa10.28□□□□□ -0.76
TUBGCP4-208ENST00000564079 PARD6AQ9NPB6 346 aa10.28□□□□□ -0.76
TUBGCP4-208ENST00000564079 TOMM20LQ6UXN7 152 aa10.28□□□□□ -0.76
TUBGCP4-208ENST00000564079 DRAM1Q8N682 238 aa10.28□□□□□ -0.76
TUBGCP4-208ENST00000564079 OR10G8Q8NGN5 311 aa10.28□□□□□ -0.76
TUBGCP4-208ENST00000564079 LSM10Q969L4 123 aaKnown RBP10.28□□□□□ -0.76
TUBGCP4-208ENST00000564079 SPRR3Q9UBC9 169 aa10.28□□□□□ -0.76
TUBGCP4-208ENST00000564079 DSPPQ9NZW4 1301 aa10.28□□□□□ -0.76
TUBGCP4-208ENST00000564079 RNASE4P34096 147 aaKnown RBP10.27□□□□□ -0.76
TUBGCP4-208ENST00000564079 SUMO2P61956 95 aaKnown RBP10.27□□□□□ -0.76
TUBGCP4-208ENST00000564079 BRD3OSQ6XYD6 125 aa10.27□□□□□ -0.76
TUBGCP4-208ENST00000564079 WFIKKN1Q96NZ8 548 aa10.27□□□□□ -0.76
TUBGCP4-208ENST00000564079 CYB5R1Q9UHQ9 305 aa10.27□□□□□ -0.76
TUBGCP4-208ENST00000564079 NUDT3O95989 172 aa10.27□□□□□ -0.77
TUBGCP4-208ENST00000564079 SULT1A2P50226 295 aa10.27□□□□□ -0.77
TUBGCP4-208ENST00000564079 XAF1Q6GPH4 301 aa10.27□□□□□ -0.77
TUBGCP4-208ENST00000564079 TBX15Q96SF7 602 aa10.27□□□□□ -0.77
TUBGCP4-208ENST00000564079 RBKSQ9H477 322 aa10.27□□□□□ -0.77
TUBGCP4-208ENST00000564079 P2RY1P47900 373 aa10.27□□□□□ -0.77
TUBGCP4-208ENST00000564079 EFNB2P52799 333 aa10.27□□□□□ -0.77
TUBGCP4-208ENST00000564079 HIST3H3Q16695 136 aa10.27□□□□□ -0.77
TUBGCP4-208ENST00000564079 Q5PR19 223 aa10.27□□□□□ -0.77
TUBGCP4-208ENST00000564079 MIA3Q5JRA6 1907 aa10.27□□□□□ -0.77
TUBGCP4-208ENST00000564079 OGG1O15527 345 aa10.27□□□□□ -0.77
TUBGCP4-208ENST00000564079 ZNF708P17019 499 aa10.27□□□□□ -0.77
TUBGCP4-208ENST00000564079 MMP16P51512 607 aa10.27□□□□□ -0.77
TUBGCP4-208ENST00000564079 VAMP8Q9BV40 100 aa10.27□□□□□ -0.77
TUBGCP4-208ENST00000564079 LHFPL6Q9Y693 200 aa10.27□□□□□ -0.77
TUBGCP4-208ENST00000564079 MRPL30Q8TCC3 161 aaKnown RBP10.27□□□□□ -0.77
TUBGCP4-208ENST00000564079 RIPPLY3P57055 190 aa10.26□□□□□ -0.77
TUBGCP4-208ENST00000564079 C2orf83Q53S99 150 aa10.26□□□□□ -0.77
TUBGCP4-208ENST00000564079 DOCK3Q8IZD9 2030 aa10.26□□□□□ -0.77
TUBGCP4-208ENST00000564079 ISLRO14498 428 aa10.26□□□□□ -0.77
TUBGCP4-208ENST00000564079 EWSR1Q01844 656 aaKnown RBP eCLIP10.26□□□□□ -0.77
TUBGCP4-208ENST00000564079 PKIBQ9C010 78 aa10.26□□□□□ -0.77
TUBGCP4-208ENST00000564079 JPT1Q9UK76 154 aa10.26□□□□□ -0.77
TUBGCP4-208ENST00000564079 NEUROG3Q9Y4Z2 214 aa10.26□□□□□ -0.77
TUBGCP4-208ENST00000564079 ADRB1P08588 477 aa10.26□□□□□ -0.77
TUBGCP4-208ENST00000564079 ERVK11-1P61568 191 aa10.26□□□□□ -0.77
TUBGCP4-208ENST00000564079 HSPB1P04792 205 aaKnown RBP10.26□□□□□ -0.77
TUBGCP4-208ENST00000564079 TDGF1P13385 188 aa10.26□□□□□ -0.77
TUBGCP4-208ENST00000564079 UNC119Q13432 240 aa10.26□□□□□ -0.77
TUBGCP4-208ENST00000564079 CACNA1BQ00975 2339 aa10.26□□□□□ -0.77
TUBGCP4-208ENST00000564079 PHOX2AO14813 284 aa10.26□□□□□ -0.77
TUBGCP4-208ENST00000564079 CCL3L1P16619 93 aa10.26□□□□□ -0.77
TUBGCP4-208ENST00000564079 MALP21145 153 aa10.26□□□□□ -0.77
TUBGCP4-208ENST00000564079 MAP1LC3CQ9BXW4 147 aa10.26□□□□□ -0.77
TUBGCP4-208ENST00000564079 SPTA1P02549 2419 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 MBPP02686 304 aaPredicted RBP10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 C1QCP02747 245 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 GEMIN7Q9H840 131 aaKnown RBP10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 AKIP1Q9NQ31 210 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 CRPP02741 224 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 CD1AP06126 327 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 SPNP16150 400 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 C1QL2Q7Z5L3 287 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 KLHDC1Q8N7A1 406 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 TOMM7Q9P0U1 55 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 ZMAT5Q9UDW3 170 aaKnown RBP10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 TNFRSF18Q9Y5U5 241 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 RP1P56715 2156 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 SMIM18P0DKX4 95 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 FOXF2Q12947 444 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 APCDD1LQ8NCL9 501 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 GSX2Q9BZM3 304 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 LAMB2P55268 1798 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 CCKARP32238 428 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 PTGDSP41222 190 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 SSX1Q16384 188 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 WDR73Q6P4I2 378 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 GALNT14Q96FL9 552 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 TAF1LQ8IZX4 1826 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 PRB1P04280 392 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 RPL29P47914 159 aaKnown RBP10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 ACP7Q6ZNF0 438 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 AMELYQ99218 206 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 MYOFQ9NZM1 2061 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 ANKRD20A5PA0PJZ0 165 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 HMGA2P52926 109 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 C20orf204Q6ZNR8 217 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 NPIPB3Q92617 1050 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 TMEM54Q969K7 222 aa10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 GSX1Q9H4S2 264 aaPredicted RBP10.25□□□□□ -0.77
TUBGCP4-208ENST00000564079 WDR90Q96KV7 1748 aa10.24□□□□□ -0.77
TUBGCP4-208ENST00000564079 CKS2P33552 79 aa10.24□□□□□ -0.77
TUBGCP4-208ENST00000564079 PRR30Q53SZ7 412 aaPredicted RBP10.24□□□□□ -0.77
TUBGCP4-208ENST00000564079 BEND2Q8NDZ0 799 aa10.24□□□□□ -0.77
TUBGCP4-208ENST00000564079 TMEM177Q53S58 311 aa10.24□□□□□ -0.77
TUBGCP4-208ENST00000564079 MIC13Q5XKP0 118 aa10.24□□□□□ -0.77
TUBGCP4-208ENST00000564079 ASCL4Q6XD76 172 aa10.24□□□□□ -0.77
TUBGCP4-208ENST00000564079 MRAPQ8TCY5 172 aa10.24□□□□□ -0.77
TUBGCP4-208ENST00000564079 OR5P3Q8WZ94 311 aa10.24□□□□□ -0.77
TUBGCP4-208ENST00000564079 OPN4Q9UHM6 478 aa10.24□□□□□ -0.77
TUBGCP4-208ENST00000564079 TFF1P04155 84 aa10.24□□□□□ -0.77
TUBGCP4-208ENST00000564079 HKR1P10072 659 aa10.24□□□□□ -0.77
TUBGCP4-208ENST00000564079 OR4A47Q6IF82 309 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms