RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 IGF1P05019 195 aa13.18□□□□□ -0.3
CLK3-207ENST00000562389 PLGLAQ15195 96 aa13.18□□□□□ -0.3
CLK3-207ENST00000562389 PRR31Q5SQ13 230 aa13.18□□□□□ -0.3
CLK3-207ENST00000562389 ZNF818PQ6ZRF7 136 aa13.18□□□□□ -0.3
CLK3-207ENST00000562389 MFSD4AQ8N468 514 aa13.18□□□□□ -0.3
CLK3-207ENST00000562389 TMEM229BQ8NBD8 167 aa13.18□□□□□ -0.3
CLK3-207ENST00000562389 FXYD6Q9H0Q3 95 aa13.18□□□□□ -0.3
CLK3-207ENST00000562389 TAS2R8Q9NYW2 309 aa13.18□□□□□ -0.3
CLK3-207ENST00000562389 METTL1Q9UBP6 276 aaKnown RBP13.18□□□□□ -0.3
CLK3-207ENST00000562389 LINC00527Q9UJ94 153 aa13.18□□□□□ -0.3
CLK3-207ENST00000562389 SHOXO15266 292 aa13.17□□□□□ -0.3
CLK3-207ENST00000562389 FCGR3BO75015 233 aa13.17□□□□□ -0.3
CLK3-207ENST00000562389 CRYZL1O95825 349 aa13.17□□□□□ -0.3
CLK3-207ENST00000562389 CD74P04233 296 aa13.17□□□□□ -0.3
CLK3-207ENST00000562389 S100A5P33763 92 aa13.17□□□□□ -0.3
CLK3-207ENST00000562389 TAS2R19P59542 299 aa13.17□□□□□ -0.3
CLK3-207ENST00000562389 TSPAN5P62079 268 aa13.17□□□□□ -0.3
CLK3-207ENST00000562389 CD83Q01151 205 aa13.17□□□□□ -0.3
CLK3-207ENST00000562389 FOXB2Q5VYV0 432 aa13.17□□□□□ -0.3
CLK3-207ENST00000562389 C10orf99Q6UWK7 81 aa13.17□□□□□ -0.3
CLK3-207ENST00000562389 OR4X2Q8NGF9 303 aa13.17□□□□□ -0.3
CLK3-207ENST00000562389 OSR1Q8TAX0 266 aaPredicted RBP13.17□□□□□ -0.3
CLK3-207ENST00000562389 TCTEX1D2Q8WW35 142 aa13.17□□□□□ -0.3
CLK3-207ENST00000562389 GON7Q9BXV9 100 aa13.17□□□□□ -0.3
CLK3-207ENST00000562389 OR51J1Q9H342 316 aa13.17□□□□□ -0.3
CLK3-207ENST00000562389 FABP12A6NFH5 140 aa13.16□□□□□ -0.3
CLK3-207ENST00000562389 SRRM4A7MD48 611 aaKnown RBP13.16□□□□□ -0.3
CLK3-207ENST00000562389 M0QYG6 137 aa13.16□□□□□ -0.3
CLK3-207ENST00000562389 TNFSF12O43508 249 aa13.16□□□□□ -0.3
CLK3-207ENST00000562389 GSTZ1O43708 216 aaPredicted RBP13.16□□□□□ -0.3
CLK3-207ENST00000562389 SLC25A17O43808 307 aa13.16□□□□□ -0.3
CLK3-207ENST00000562389 CD3DP04234 171 aa13.16□□□□□ -0.3
CLK3-207ENST00000562389 CRYGBP07316 175 aa13.16□□□□□ -0.3
CLK3-207ENST00000562389 GNRHRP30968 328 aa13.16□□□□□ -0.3
CLK3-207ENST00000562389 KIR2DS2P43631 304 aa13.16□□□□□ -0.3
CLK3-207ENST00000562389 SLC35B1P78383 322 aa13.16□□□□□ -0.3
CLK3-207ENST00000562389 CATR1Q13166 79 aa13.16□□□□□ -0.3
CLK3-207ENST00000562389 C2orf68Q2NKX9 166 aa13.16□□□□□ -0.3
CLK3-207ENST00000562389 RNASE10Q5GAN6 216 aaKnown RBP13.16□□□□□ -0.3
CLK3-207ENST00000562389 NDUFA11Q86Y39 141 aa13.16□□□□□ -0.3
CLK3-207ENST00000562389 ARRDC1Q8N5I2 433 aa13.16□□□□□ -0.3
CLK3-207ENST00000562389 OR4S2Q8NH73 311 aa13.16□□□□□ -0.3
CLK3-207ENST00000562389 CITED2Q99967 270 aaPredicted RBP13.16□□□□□ -0.3
CLK3-207ENST00000562389 FCN1O00602 326 aa13.15□□□□□ -0.3
CLK3-207ENST00000562389 ATP6V0E1O15342 81 aa13.15□□□□□ -0.3
CLK3-207ENST00000562389 CSF1P09603 554 aa13.15□□□□□ -0.3
CLK3-207ENST00000562389 VDAC1P21796 283 aa13.15□□□□□ -0.3
CLK3-207ENST00000562389 UCP3P55916 312 aa13.15□□□□□ -0.3
CLK3-207ENST00000562389 BRWD1-AS2P59051 145 aa13.15□□□□□ -0.3
CLK3-207ENST00000562389 CX3CL1P78423 397 aa13.15□□□□□ -0.3
CLK3-207ENST00000562389 NDPQ00604 133 aa13.15□□□□□ -0.3
CLK3-207ENST00000562389 CFHR3Q02985 330 aa13.15□□□□□ -0.3
CLK3-207ENST00000562389 VMA21Q3ZAQ7 101 aa13.15□□□□□ -0.3
CLK3-207ENST00000562389 OR2B11Q5JQS5 317 aa13.15□□□□□ -0.3
CLK3-207ENST00000562389 TCTEX1D4Q5JR98 221 aa13.15□□□□□ -0.3
CLK3-207ENST00000562389 HIST2H2BDQ6DRA6 164 aa13.15□□□□□ -0.3
CLK3-207ENST00000562389 ZNF329Q86UD4 541 aa13.15□□□□□ -0.3
CLK3-207ENST00000562389 COMMD1Q8N668 190 aa13.15□□□□□ -0.3
CLK3-207ENST00000562389 GPHA2Q96T91 129 aa13.15□□□□□ -0.3
CLK3-207ENST00000562389 TINAGL1Q9GZM7 467 aaPredicted RBP13.15□□□□□ -0.3
CLK3-207ENST00000562389 TPSG1Q9NRR2 321 aa13.15□□□□□ -0.3
CLK3-207ENST00000562389 PLXNB1O43157 2135 aa13.15□□□□□ -0.3
CLK3-207ENST00000562389 GPR31O00270 319 aa13.14□□□□□ -0.31
CLK3-207ENST00000562389 CA2P00918 260 aa13.14□□□□□ -0.31
CLK3-207ENST00000562389 OPN1MWP04001 364 aa13.14□□□□□ -0.31
CLK3-207ENST00000562389 IFNA6P05013 189 aa13.14□□□□□ -0.31
CLK3-207ENST00000562389 OPN1MW2P0DN77 364 aa13.14□□□□□ -0.31
CLK3-207ENST00000562389 OPN1MW3P0DN78 364 aa13.14□□□□□ -0.31
CLK3-207ENST00000562389 CRIP2P52943 208 aaPredicted RBP13.14□□□□□ -0.31
CLK3-207ENST00000562389 UBE2KP61086 200 aa13.14□□□□□ -0.31
CLK3-207ENST00000562389 AADACL3Q5VUY0 350 aa13.14□□□□□ -0.31
CLK3-207ENST00000562389 STEAP1BQ6NZ63 245 aa13.14□□□□□ -0.31
CLK3-207ENST00000562389 LPCAT3Q6P1A2 487 aa13.14□□□□□ -0.31
CLK3-207ENST00000562389 ZNF562Q6V9R5 426 aa13.14□□□□□ -0.31
CLK3-207ENST00000562389 CCDC190Q86UF4 302 aa13.14□□□□□ -0.31
CLK3-207ENST00000562389 PPP1R27Q86WC6 154 aa13.14□□□□□ -0.31
CLK3-207ENST00000562389 LHFPL1Q86WI0 220 aa13.14□□□□□ -0.31
CLK3-207ENST00000562389 TEX45Q8NA69 505 aa13.14□□□□□ -0.31
CLK3-207ENST00000562389 CLCC1Q96S66 551 aa13.14□□□□□ -0.31
CLK3-207ENST00000562389 PARP11Q9NR21 331 aa13.14□□□□□ -0.31
CLK3-207ENST00000562389 V9GYH0 126 aa13.14□□□□□ -0.31
CLK3-207ENST00000562389 ADARB2-AS1A8MUL3 147 aa13.13□□□□□ -0.31
CLK3-207ENST00000562389 RBFOX2O43251 390 aaKnown RBP eCLIP13.13□□□□□ -0.31
CLK3-207ENST00000562389 RAB3DO95716 219 aa13.13□□□□□ -0.31
CLK3-207ENST00000562389 PTBP1P26599 531 aaKnown RBP eCLIP13.13□□□□□ -0.31
CLK3-207ENST00000562389 TEX38Q6PEX7 206 aa13.13□□□□□ -0.31
CLK3-207ENST00000562389 CMTM1Q8IZ96 169 aa13.13□□□□□ -0.31
CLK3-207ENST00000562389 OR4D10Q8NGI6 311 aa13.13□□□□□ -0.31
CLK3-207ENST00000562389 RSRP1Q9BUV0 290 aa13.13□□□□□ -0.31
CLK3-207ENST00000562389 TSSC4Q9Y5U2 329 aaPredicted RBP13.13□□□□□ -0.31
CLK3-207ENST00000562389 TCRBV4S1A1TA0A5B7 111 aa13.12□□□□□ -0.31
CLK3-207ENST00000562389 PGLYRP1O75594 196 aaPredicted RBP13.12□□□□□ -0.31
CLK3-207ENST00000562389 AKAIN1P0CW23 69 aa13.12□□□□□ -0.31
CLK3-207ENST00000562389 SAA1P0DJI8 122 aaPredicted RBP13.12□□□□□ -0.31
CLK3-207ENST00000562389 PPIFP30405 207 aaKnown RBP13.12□□□□□ -0.31
CLK3-207ENST00000562389 MEF2DQ14814 521 aa13.12□□□□□ -0.31
CLK3-207ENST00000562389 NSUN5P1Q3KNT7 163 aa13.12□□□□□ -0.31
CLK3-207ENST00000562389 C19orf54Q5BKX5 351 aa13.12□□□□□ -0.31
CLK3-207ENST00000562389 SLC38A6Q8IZM9 456 aa13.12□□□□□ -0.31
CLK3-207ENST00000562389 SPAG16Q8N0X2 631 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms