RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 CEACAM3P40198 252 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 NKX2-1P43699 371 aaPredicted RBP11.62□□□□□ -0.55
COMMD4-205ENST00000562310 RAB13P51153 203 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 DVL1P1P54792 670 aaPredicted RBP11.62□□□□□ -0.55
COMMD4-205ENST00000562310 KRTAP10-9P60411 292 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 ZNF345Q14585 488 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 LAMTOR1Q6IAA8 161 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 C1orf229Q6ZS94 237 aaPredicted RBP11.62□□□□□ -0.55
COMMD4-205ENST00000562310 H2BFWTQ7Z2G1 175 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 PDPNQ86YL7 162 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 INO80EQ8NBZ0 244 aaPredicted RBP11.62□□□□□ -0.55
COMMD4-205ENST00000562310 OR5AN1Q8NGI8 311 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 DCUN1D4Q92564 292 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 GPR146Q96CH1 333 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 SIRT7Q9NRC8 400 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 SLC35D1Q9NTN3 355 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 ZNRD1Q9P1U0 126 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 CACNG5Q9UF02 275 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 CACFD1Q9UGQ2 172 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 TNFSF18Q9UNG2 199 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 A0A0G2JRQ6 117 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 ODF3BA8MYP8 253 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 FAM157AC9JC47 383 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 FAM90A26D6RGX4 464 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 BUB1B-PAK6H3BSN5 160 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 K7EPK0 472 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 PITX3O75364 302 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 OR2F2O95006 317 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 CRYZL1O95825 349 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 KRASP01116 189 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 MBPP02686 304 aaPredicted RBP11.61□□□□□ -0.55
COMMD4-205ENST00000562310 MMP9P14780 707 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 PVALBP20472 110 aaPredicted RBP11.61□□□□□ -0.55
COMMD4-205ENST00000562310 MC5RP33032 325 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 G6PCP35575 357 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 OR2F1Q13607 317 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 POU2AF1Q16633 256 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 VMO1Q7Z5L0 202 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 FAM71E2Q8N5Q1 922 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 OR4P4Q8NGL7 312 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 NABP2Q9BQ15 211 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 MFFQ9GZY8 342 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 LSM5Q9Y4Y9 91 aaKnown RBP11.61□□□□□ -0.55
COMMD4-205ENST00000562310 INSIG2Q9Y5U4 225 aa11.61□□□□□ -0.55
COMMD4-205ENST00000562310 A0A0D9SG52 128 aa11.6□□□□□ -0.55
COMMD4-205ENST00000562310 LEUTXA8MZ59 168 aa11.6□□□□□ -0.55
COMMD4-205ENST00000562310 E5RGE8 158 aa11.6□□□□□ -0.55
COMMD4-205ENST00000562310 H0YJW9 148 aa11.6□□□□□ -0.55
COMMD4-205ENST00000562310 WRBO00258 174 aa11.6□□□□□ -0.55
COMMD4-205ENST00000562310 TOX4O94842 621 aa11.6□□□□□ -0.55
COMMD4-205ENST00000562310 GAPDHP04406 335 aaKnown RBP11.6□□□□□ -0.55
COMMD4-205ENST00000562310 ARG1P05089 322 aa11.6□□□□□ -0.55
COMMD4-205ENST00000562310 HOXB4P17483 251 aaPredicted RBP11.6□□□□□ -0.55
COMMD4-205ENST00000562310 HTR1DP28221 377 aa11.6□□□□□ -0.55
COMMD4-205ENST00000562310 LINC00205P59089 165 aa11.6□□□□□ -0.55
COMMD4-205ENST00000562310 PRSS57Q6UWY2 283 aa11.6□□□□□ -0.55
COMMD4-205ENST00000562310 ACOT7LQ6ZUV0 252 aa11.6□□□□□ -0.55
COMMD4-205ENST00000562310 DMBX1Q8NFW5 382 aa11.6□□□□□ -0.55
COMMD4-205ENST00000562310 OSR1Q8TAX0 266 aaPredicted RBP11.6□□□□□ -0.55
COMMD4-205ENST00000562310 RPEQ96AT9 228 aa11.6□□□□□ -0.55
COMMD4-205ENST00000562310 C1orf159Q96HA4 380 aa11.6□□□□□ -0.55
COMMD4-205ENST00000562310 RNF126Q9BV68 326 aa11.6□□□□□ -0.55
COMMD4-205ENST00000562310 NSG2Q9Y328 171 aa11.6□□□□□ -0.55
COMMD4-205ENST00000562310 WASHC3Q9Y3C0 194 aa11.6□□□□□ -0.55
COMMD4-205ENST00000562310 ANKRD17O75179 2603 aaKnown RBP11.59□□□□□ -0.55
COMMD4-205ENST00000562310 OOSP1A8MZH6 123 aa11.59□□□□□ -0.55
COMMD4-205ENST00000562310 H0YIZ8 118 aa11.59□□□□□ -0.55
COMMD4-205ENST00000562310 LY6LH3BQJ8 138 aa11.59□□□□□ -0.55
COMMD4-205ENST00000562310 CXCL2P19875 107 aa11.59□□□□□ -0.55
COMMD4-205ENST00000562310 ID3Q02535 119 aa11.59□□□□□ -0.55
COMMD4-205ENST00000562310 LGALSLQ3ZCW2 172 aaPredicted RBP11.59□□□□□ -0.55
COMMD4-205ENST00000562310 TMEM177Q53S58 311 aa11.59□□□□□ -0.55
COMMD4-205ENST00000562310 MINOS1Q5TGZ0 78 aa11.59□□□□□ -0.55
COMMD4-205ENST00000562310 HCP5Q6MZN7 132 aa11.59□□□□□ -0.55
COMMD4-205ENST00000562310 FOXRED2Q8IWF2 684 aa11.59□□□□□ -0.55
COMMD4-205ENST00000562310 OR8H3Q8N146 312 aa11.59□□□□□ -0.55
COMMD4-205ENST00000562310 MMP26Q9NRE1 261 aa11.59□□□□□ -0.55
COMMD4-205ENST00000562310 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.59□□□□□ -0.55
COMMD4-205ENST00000562310 OR5AC2Q9NZP5 309 aa11.59□□□□□ -0.55
COMMD4-205ENST00000562310 DPM3Q9P2X0 92 aa11.59□□□□□ -0.55
COMMD4-205ENST00000562310 MINOS1-NBL1R4GNA1 71 aa11.59□□□□□ -0.55
COMMD4-205ENST00000562310 TEP1Q99973 2627 aaKnown RBP11.59□□□□□ -0.55
COMMD4-205ENST00000562310 ARHGAP32A7KAX9 2087 aa11.59□□□□□ -0.55
COMMD4-205ENST00000562310 UTP20O75691 2785 aaKnown RBP11.59□□□□□ -0.55
COMMD4-205ENST00000562310 TEX15Q9BXT5 2789 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 SPG11Q96JI7 2443 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 TRAV20A0A0B4J274 112 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 B4DSR2 109 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 H7C2Y5 167 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 MED6O75586 246 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 MSMBP08118 114 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 GATA3P23771 443 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 S100A11P31949 105 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 REG1BP48304 166 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 VAMP2P63027 116 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 PAX8Q06710 450 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 MIDNQ504T8 468 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 Q5PR19 223 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 TPTE2P1Q5T6R2 138 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 KCNRGQ8N5I3 272 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms