RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 M0QYG6 137 aa10.6□□□□□ -0.71
CDH1-204ENST00000562118 LGALS7P47929 136 aa10.6□□□□□ -0.71
CDH1-204ENST00000562118 HERV-K104P61576 105 aa10.6□□□□□ -0.71
CDH1-204ENST00000562118 RND3P61587 244 aa10.6□□□□□ -0.71
CDH1-204ENST00000562118 SSBP2P81877 361 aaPredicted RBP10.6□□□□□ -0.71
CDH1-204ENST00000562118 CFHR3Q02985 330 aa10.6□□□□□ -0.71
CDH1-204ENST00000562118 KLF9Q13886 244 aaPredicted RBP10.6□□□□□ -0.71
CDH1-204ENST00000562118 MEF2DQ14814 521 aa10.6□□□□□ -0.71
CDH1-204ENST00000562118 RTL8BQ17RB0 113 aa10.6□□□□□ -0.71
CDH1-204ENST00000562118 CNPY1Q3B7I2 92 aa10.6□□□□□ -0.71
CDH1-204ENST00000562118 TMEM95Q3KNT9 176 aa10.6□□□□□ -0.71
CDH1-204ENST00000562118 C19orf54Q5BKX5 351 aa10.6□□□□□ -0.71
CDH1-204ENST00000562118 RNASE12Q5GAN4 147 aaKnown RBP10.6□□□□□ -0.71
CDH1-204ENST00000562118 KCTD9Q7L273 389 aa10.6□□□□□ -0.71
CDH1-204ENST00000562118 CADM3Q8N126 398 aa10.6□□□□□ -0.71
CDH1-204ENST00000562118 OSR1Q8TAX0 266 aaPredicted RBP10.6□□□□□ -0.71
CDH1-204ENST00000562118 FLYWCH2Q96CP2 140 aaKnown RBP10.6□□□□□ -0.71
CDH1-204ENST00000562118 HSPB9Q9BQS6 159 aa10.6□□□□□ -0.71
CDH1-204ENST00000562118 FAM212BQ9NTI7 297 aaPredicted RBP10.6□□□□□ -0.71
CDH1-204ENST00000562118 TNCP24821 2201 aa10.6□□□□□ -0.71
CDH1-204ENST00000562118 IGHV7-81A0A0B4J1V7 117 aa10.59□□□□□ -0.71
CDH1-204ENST00000562118 SH2D7A6NKC9 451 aaPredicted RBP10.59□□□□□ -0.71
CDH1-204ENST00000562118 KCNAB3O43448 404 aa10.59□□□□□ -0.71
CDH1-204ENST00000562118 AKAIN1P0CW23 69 aa10.59□□□□□ -0.71
CDH1-204ENST00000562118 KIR2DS2P43631 304 aa10.59□□□□□ -0.71
CDH1-204ENST00000562118 VDAC2P45880 294 aaPredicted RBP10.59□□□□□ -0.71
CDH1-204ENST00000562118 PSG5Q15238 335 aa10.59□□□□□ -0.71
CDH1-204ENST00000562118 POU2AF1Q16633 256 aa10.59□□□□□ -0.71
CDH1-204ENST00000562118 SPANXN2Q5MJ10 180 aa10.59□□□□□ -0.71
CDH1-204ENST00000562118 LPCAT3Q6P1A2 487 aa10.59□□□□□ -0.71
CDH1-204ENST00000562118 SHISA2Q6UWI4 295 aa10.59□□□□□ -0.71
CDH1-204ENST00000562118 KLHDC1Q8N7A1 406 aa10.59□□□□□ -0.71
CDH1-204ENST00000562118 OR4C16Q8NGL9 310 aa10.59□□□□□ -0.71
CDH1-204ENST00000562118 ZNF486Q96H40 463 aaPredicted RBP10.59□□□□□ -0.71
CDH1-204ENST00000562118 TSNAXQ99598 290 aaKnown RBP10.59□□□□□ -0.71
CDH1-204ENST00000562118 THAP7Q9BT49 309 aaPredicted RBP10.59□□□□□ -0.71
CDH1-204ENST00000562118 LINC01548A6NM66 108 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 NCBP2LA6PVI3 153 aaKnown RBP10.58□□□□□ -0.72
CDH1-204ENST00000562118 H7C2Y5 167 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 J3QRK9 145 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 GPR31O00270 319 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 RAB3DO95716 219 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 IL6RP08887 468 aaPredicted RBP10.58□□□□□ -0.72
CDH1-204ENST00000562118 FGF2P09038 288 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 VSIG10L2P0DP72 767 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 FXYD4P59646 89 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 UBE2KP61086 200 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 NDPQ00604 133 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 SURF2Q15527 256 aaPredicted RBP10.58□□□□□ -0.72
CDH1-204ENST00000562118 SLC35E3Q7Z769 313 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 TMEM17Q86X19 198 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 SLC38A6Q8IZM9 456 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 Q8N402 240 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 TCTEX1D1Q8N7M0 179 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 RNF152Q8N8N0 203 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 GDPD1Q8N9F7 314 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 OR4S2Q8NH73 311 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 TERB2Q8NHR7 220 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 RASL11BQ9BPW5 248 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 AKIP1Q9NQ31 210 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 PTTG2Q9NZH5 202 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 PRELID3BQ9Y3B1 194 aa10.58□□□□□ -0.72
CDH1-204ENST00000562118 AP4M1O00189 453 aa10.57□□□□□ -0.72
CDH1-204ENST00000562118 PGLYRP1O75594 196 aaPredicted RBP10.57□□□□□ -0.72
CDH1-204ENST00000562118 ECI1P42126 302 aa10.57□□□□□ -0.72
CDH1-204ENST00000562118 TSPAN5P62079 268 aa10.57□□□□□ -0.72
CDH1-204ENST00000562118 ZNF45Q02386 682 aa10.57□□□□□ -0.72
CDH1-204ENST00000562118 LIN54Q6MZP7 749 aa10.57□□□□□ -0.72
CDH1-204ENST00000562118 PUSL1Q8N0Z8 303 aaKnown RBP10.57□□□□□ -0.72
CDH1-204ENST00000562118 STPG2Q8N412 459 aa10.57□□□□□ -0.72
CDH1-204ENST00000562118 C3orf56Q8N813 242 aa10.57□□□□□ -0.72
CDH1-204ENST00000562118 TEX45Q8NA69 505 aa10.57□□□□□ -0.72
CDH1-204ENST00000562118 OR13C8Q8NGS7 320 aa10.57□□□□□ -0.72
CDH1-204ENST00000562118 HARBI1Q96MB7 349 aa10.57□□□□□ -0.72
CDH1-204ENST00000562118 GPHA2Q96T91 129 aa10.57□□□□□ -0.72
CDH1-204ENST00000562118 FBXL15Q9H469 300 aa10.57□□□□□ -0.72
CDH1-204ENST00000562118 TPSG1Q9NRR2 321 aa10.57□□□□□ -0.72
CDH1-204ENST00000562118 KIAA1456Q9P272 454 aa10.57□□□□□ -0.72
CDH1-204ENST00000562118 TET2Q6N021 2002 aaPredicted RBP10.57□□□□□ -0.72
CDH1-204ENST00000562118 FCN1O00602 326 aa10.56□□□□□ -0.72
CDH1-204ENST00000562118 RAMP3O60896 148 aa10.56□□□□□ -0.72
CDH1-204ENST00000562118 FCGR3BO75015 233 aa10.56□□□□□ -0.72
CDH1-204ENST00000562118 CRYZL1O95825 349 aa10.56□□□□□ -0.72
CDH1-204ENST00000562118 EGR2P11161 476 aaPredicted RBP10.56□□□□□ -0.72
CDH1-204ENST00000562118 PPIFP30405 207 aaKnown RBP10.56□□□□□ -0.72
CDH1-204ENST00000562118 RPS16P62249 146 aaKnown RBP10.56□□□□□ -0.72
CDH1-204ENST00000562118 CATR1Q13166 79 aa10.56□□□□□ -0.72
CDH1-204ENST00000562118 CBX3Q13185 183 aa10.56□□□□□ -0.72
CDH1-204ENST00000562118 PYDC2Q56P42 97 aa10.56□□□□□ -0.72
CDH1-204ENST00000562118 TCTEX1D4Q5JR98 221 aa10.56□□□□□ -0.72
CDH1-204ENST00000562118 FAAP20Q6NZ36 180 aa10.56□□□□□ -0.72
CDH1-204ENST00000562118 ZNF562Q6V9R5 426 aa10.56□□□□□ -0.72
CDH1-204ENST00000562118 PPP1R27Q86WC6 154 aa10.56□□□□□ -0.72
CDH1-204ENST00000562118 CMTM1Q8IZ96 169 aa10.56□□□□□ -0.72
CDH1-204ENST00000562118 CD300LFQ8TDQ1 290 aa10.56□□□□□ -0.72
CDH1-204ENST00000562118 CHPT1Q8WUD6 406 aa10.56□□□□□ -0.72
CDH1-204ENST00000562118 TCTEX1D2Q8WW35 142 aa10.56□□□□□ -0.72
CDH1-204ENST00000562118 OR51J1Q9H342 316 aa10.56□□□□□ -0.72
CDH1-204ENST00000562118 PLEKHA2Q9HB19 425 aa10.56□□□□□ -0.72
CDH1-204ENST00000562118 SLC2A9Q9NRM0 540 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms