RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 ADTRPQ96IZ2 230 aa18.17■□□□□ 0.5
SYNGR3-202ENST00000562045 ZNF48Q96MX3 618 aaPredicted RBP18.17■□□□□ 0.5
SYNGR3-202ENST00000562045 RANGRFQ9HD47 186 aaPredicted RBP18.17■□□□□ 0.5
SYNGR3-202ENST00000562045 PRELID3BQ9Y3B1 194 aa18.17■□□□□ 0.5
SYNGR3-202ENST00000562045 AMMECR1Q9Y4X0 333 aaPredicted RBP18.17■□□□□ 0.5
SYNGR3-202ENST00000562045 RPA2P15927 270 aa18.16■□□□□ 0.5
SYNGR3-202ENST00000562045 THBS3P49746 956 aa18.16■□□□□ 0.5
SYNGR3-202ENST00000562045 TMEM268Q5VZI3 342 aa18.16■□□□□ 0.5
SYNGR3-202ENST00000562045 NCR3LG1Q68D85 454 aa18.16■□□□□ 0.5
SYNGR3-202ENST00000562045 TEX29Q8N6K0 151 aa18.16■□□□□ 0.5
SYNGR3-202ENST00000562045 LHFPL5Q8TAF8 219 aa18.16■□□□□ 0.5
SYNGR3-202ENST00000562045 CD300LFQ8TDQ1 290 aa18.16■□□□□ 0.5
SYNGR3-202ENST00000562045 RBPMSQ93062 196 aaKnown RBP18.16■□□□□ 0.5
SYNGR3-202ENST00000562045 PPP1R14BQ96C90 147 aa18.16■□□□□ 0.5
SYNGR3-202ENST00000562045 CCSO14618 274 aa18.15■□□□□ 0.5
SYNGR3-202ENST00000562045 ADAP1O75689 374 aa18.15■□□□□ 0.5
SYNGR3-202ENST00000562045 IFNA21P01568 189 aa18.15■□□□□ 0.5
SYNGR3-202ENST00000562045 HOXB5P09067 269 aa18.15■□□□□ 0.5
SYNGR3-202ENST00000562045 H2BFSP57053 126 aa18.15■□□□□ 0.5
SYNGR3-202ENST00000562045 TUSC1Q2TAM9 212 aa18.15■□□□□ 0.5
SYNGR3-202ENST00000562045 SPAG16Q8N0X2 631 aa18.15■□□□□ 0.5
SYNGR3-202ENST00000562045 ASB13Q8WXK3 278 aa18.15■□□□□ 0.5
SYNGR3-202ENST00000562045 MS4A7Q9GZW8 240 aaPredicted RBP18.15■□□□□ 0.5
SYNGR3-202ENST00000562045 DUXBA0A1W2PPF3 345 aa18.15■□□□□ 0.5
SYNGR3-202ENST00000562045 SIX6O95475 246 aa18.15■□□□□ 0.5
SYNGR3-202ENST00000562045 GIPP09681 153 aaPredicted RBP18.15■□□□□ 0.5
SYNGR3-202ENST00000562045 KIR2DS2P43631 304 aa18.15■□□□□ 0.5
SYNGR3-202ENST00000562045 CD300CQ08708 224 aa18.15■□□□□ 0.5
SYNGR3-202ENST00000562045 SLC35G3Q8N808 338 aa18.15■□□□□ 0.5
SYNGR3-202ENST00000562045 OR4P4Q8NGL7 312 aa18.15■□□□□ 0.5
SYNGR3-202ENST00000562045 C17orf50Q8WW18 174 aa18.15■□□□□ 0.5
SYNGR3-202ENST00000562045 ST6GALNAC6Q969X2 333 aa18.15■□□□□ 0.5
SYNGR3-202ENST00000562045 FYTTD1Q96QD9 318 aaKnown RBP18.15■□□□□ 0.5
SYNGR3-202ENST00000562045 TMED3Q9Y3Q3 217 aa18.15■□□□□ 0.5
SYNGR3-202ENST00000562045 FAM25EA8MYX2 175 aa18.14■□□□□ 0.49
SYNGR3-202ENST00000562045 BUB1B-PAK6H3BSN5 160 aa18.14■□□□□ 0.49
SYNGR3-202ENST00000562045 OR2A4O95047 310 aa18.14■□□□□ 0.49
SYNGR3-202ENST00000562045 LINC00205P59089 165 aa18.14■□□□□ 0.49
SYNGR3-202ENST00000562045 ZNF585BQ52M93 769 aa18.14■□□□□ 0.49
SYNGR3-202ENST00000562045 GSG1LQ6UXU4 331 aa18.14■□□□□ 0.49
SYNGR3-202ENST00000562045 C9orf139Q6ZV77 190 aa18.14■□□□□ 0.49
SYNGR3-202ENST00000562045 LYZL2Q7Z4W2 148 aa18.14■□□□□ 0.49
SYNGR3-202ENST00000562045 SELENOHQ8IZQ5 122 aaKnown RBP18.14■□□□□ 0.49
SYNGR3-202ENST00000562045 TCTE3Q8IZS6 198 aa18.14■□□□□ 0.49
SYNGR3-202ENST00000562045 OR2A7Q96R45 310 aa18.14■□□□□ 0.49
SYNGR3-202ENST00000562045 PDCD10Q9BUL8 212 aa18.14■□□□□ 0.49
SYNGR3-202ENST00000562045 A0A0U1RQK1 487 aa18.13■□□□□ 0.49
SYNGR3-202ENST00000562045 C5orf51A6NDU8 294 aa18.13■□□□□ 0.49
SYNGR3-202ENST00000562045 RBFOX2O43251 390 aaKnown RBP eCLIP18.13■□□□□ 0.49
SYNGR3-202ENST00000562045 ARG1P05089 322 aa18.13■□□□□ 0.49
SYNGR3-202ENST00000562045 UBE2E1P51965 193 aa18.13■□□□□ 0.49
SYNGR3-202ENST00000562045 OR2B11Q5JQS5 317 aa18.13■□□□□ 0.49
SYNGR3-202ENST00000562045 DDB2Q92466 427 aa18.13■□□□□ 0.49
SYNGR3-202ENST00000562045 AJUBAQ96IF1 538 aa18.13■□□□□ 0.49
SYNGR3-202ENST00000562045 CHIAQ9BZP6 476 aa18.13■□□□□ 0.49
SYNGR3-202ENST00000562045 C13orf42A0A1B0GVH6 325 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 ODF3BA8MYP8 253 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 NPFFO15130 113 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 RAMP3O60896 148 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 CT45A6P0DMU7 189 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 CT45A5P0DMU8 189 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 CT45A7P0DMV0 189 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 PAX6P26367 422 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 LPAR6P43657 344 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 RAP2BP61225 183 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 DEFB112Q30KQ8 113 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 LDLRAD2Q5SZI1 272 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 GGNBP1Q5YKI7 109 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 TGIF2LXQ8IUE1 241 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 SIGLECL1Q8N7X8 197 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 FCGR3BO75015 233 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 VDAC1P21796 283 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 HTR1DP28221 377 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 BRWD1-AS2P59051 145 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 ZNF383Q8NA42 475 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 FAM210AQ96ND0 272 aa18.12■□□□□ 0.49
SYNGR3-202ENST00000562045 SAA4P35542 130 aa18.11■□□□□ 0.49
SYNGR3-202ENST00000562045 CYCSP99999 105 aaKnown RBP18.11■□□□□ 0.49
SYNGR3-202ENST00000562045 TAGLNQ01995 201 aaKnown RBP18.11■□□□□ 0.49
SYNGR3-202ENST00000562045 ZNF816Q0VGE8 651 aaPredicted RBP18.11■□□□□ 0.49
SYNGR3-202ENST00000562045 MRPL20Q9BYC9 149 aaKnown RBP18.11■□□□□ 0.49
SYNGR3-202ENST00000562045 TXNL1O43396 289 aa18.1■□□□□ 0.49
SYNGR3-202ENST00000562045 ATG12O94817 140 aa18.1■□□□□ 0.49
SYNGR3-202ENST00000562045 IGKV1-39P01597 117 aa18.1■□□□□ 0.49
SYNGR3-202ENST00000562045 IGKV1D-39P04432 117 aa18.1■□□□□ 0.49
SYNGR3-202ENST00000562045 CEACAM3P40198 252 aa18.1■□□□□ 0.49
SYNGR3-202ENST00000562045 REG1BP48304 166 aa18.1■□□□□ 0.49
SYNGR3-202ENST00000562045 SRSF4Q08170 494 aaKnown RBP18.1■□□□□ 0.49
SYNGR3-202ENST00000562045 LHFPL4Q7Z7J7 247 aa18.1■□□□□ 0.49
SYNGR3-202ENST00000562045 OR4S2Q8NH73 311 aa18.1■□□□□ 0.49
SYNGR3-202ENST00000562045 RPEQ96AT9 228 aa18.1■□□□□ 0.49
SYNGR3-202ENST00000562045 ESM1Q9NQ30 184 aa18.1■□□□□ 0.49
SYNGR3-202ENST00000562045 DPM3Q9P2X0 92 aa18.1■□□□□ 0.49
SYNGR3-202ENST00000562045 MPTX1A8MV57 137 aa18.09■□□□□ 0.49
SYNGR3-202ENST00000562045 LEUTXA8MZ59 168 aa18.09■□□□□ 0.49
SYNGR3-202ENST00000562045 HPRT1P00492 218 aa18.09■□□□□ 0.49
SYNGR3-202ENST00000562045 HNRNPCP07910 306 aaKnown RBP eCLIP18.09■□□□□ 0.49
SYNGR3-202ENST00000562045 DIAPH2-AS1Q14236 149 aa18.09■□□□□ 0.49
SYNGR3-202ENST00000562045 SEC22AQ96IW7 307 aa18.09■□□□□ 0.49
SYNGR3-202ENST00000562045 PLEKHA2Q9HB19 425 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms