RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 NKX6-3A6NJ46 265 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 ZNF729A6NN14 1252 aaPredicted RBP5.36□□□□□ -1.55
CAPN3-210ENST00000561817 LINC00473A8K010 186 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 LYNX1G3V0Z9 82 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 BCL2L11O43521 198 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 ATP6V1G1O75348 118 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 RNASE1P07998 156 aaKnown RBP5.36□□□□□ -1.55
CAPN3-210ENST00000561817 LYNX1P0DP58 116 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 HKR1P10072 659 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 SLC25A6P12236 298 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 VDAC1P21796 283 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 BMI1P35226 326 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 EDDM3BP56851 147 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 LINC00205P59089 165 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 MRPS11P82912 194 aaKnown RBP5.36□□□□□ -1.55
CAPN3-210ENST00000561817 EXOSC2Q13868 293 aaKnown RBP5.36□□□□□ -1.55
CAPN3-210ENST00000561817 ZNF273Q14593 569 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 TMEM30BQ3MIR4 351 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 CT45A1Q5HYN5 189 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 TMEM200BQ69YZ2 307 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 ZNF66Q6ZN08 573 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 Q6ZRM9 215 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 ZNF695Q8IW36 515 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 ODF3L1Q8IXM7 274 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 C11orf42Q8N5U0 333 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 OR10A7Q8NGE5 316 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 OR51H1Q8NH63 302 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 CT45A3Q8NHU0 189 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 THAP6Q8TBB0 222 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 IGFBPL1Q8WX77 278 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 FAM168AQ92567 244 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 LSM10Q969L4 123 aaKnown RBP5.36□□□□□ -1.55
CAPN3-210ENST00000561817 RAB24Q969Q5 203 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 GPR146Q96CH1 333 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 ABHD14BQ96IU4 210 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 ARL6Q9H0F7 186 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 OR2D2Q9H210 308 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 BEX4Q9NWD9 120 aaPredicted RBP5.36□□□□□ -1.55
CAPN3-210ENST00000561817 IDI2-AS1Q9NZ38 188 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 GSKIPQ9P0R6 139 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 RPUSD1Q9UJJ7 312 aaKnown RBP5.36□□□□□ -1.55
CAPN3-210ENST00000561817 PSG11Q9UQ72 335 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 RCL1Q9Y2P8 373 aaKnown RBP5.36□□□□□ -1.55
CAPN3-210ENST00000561817 LINC00312Q9Y6C7 94 aa5.36□□□□□ -1.55
CAPN3-210ENST00000561817 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.36□□□□□ -1.55
CAPN3-210ENST00000561817 A0A1B0GU03 582 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 SERTM2A0A1B0GWG4 89 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 hADV38S2A0JD32 116 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 MFSD2BA6NFX1 497 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 C17orf98A8MV24 154 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 A8MZ25 164 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 DVL1O14640 695 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 NDUFA2O43678 99 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 RAMP3O60896 148 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 SCAF4O95104 1147 aaKnown RBP5.35□□□□□ -1.55
CAPN3-210ENST00000561817 TMEM50AO95807 157 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 C4BPBP20851 252 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 OMGP23515 440 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 S100GP29377 79 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 DUTP33316 252 aaKnown RBP5.35□□□□□ -1.55
CAPN3-210ENST00000561817 TMEM155Q4W5P6 130 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 MIDNQ504T8 468 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 CXorf66Q5JRM2 361 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-210ENST00000561817 NCR3LG1Q68D85 454 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 SP5Q6BEB4 398 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-210ENST00000561817 SLC51BQ86UW2 128 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 TCTEX1D1Q8N7M0 179 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 STOML3Q8TAV4 291 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 ZNF596Q8TC21 504 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 DDB2Q92466 427 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 DCUN1D4Q92564 292 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 TMEM186Q96B77 213 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 BSCL2Q96G97 398 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-210ENST00000561817 HSD17B10Q99714 261 aaKnown RBP5.35□□□□□ -1.55
CAPN3-210ENST00000561817 GPR61Q9BZJ8 451 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 LIN7CQ9NUP9 197 aaKnown RBP5.35□□□□□ -1.55
CAPN3-210ENST00000561817 KCNS2Q9ULS6 477 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 AUP1Q9Y679 476 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 MALRD1Q5VYJ5 2156 aa5.35□□□□□ -1.55
CAPN3-210ENST00000561817 LRRK2Q5S007 2527 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 SPTAN1Q13813 2472 aaKnown RBP5.34□□□□□ -1.55
CAPN3-210ENST00000561817 LINC00862A6NCI5 91 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 GAGE10A6NGK3 116 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 A6NNC1 897 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 RNF212BA8MTL3 300 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 E5RGE8 158 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 OVOL3O00110 214 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 ST8SIA3O43173 380 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 NDUFB3O43676 98 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 LY6HO94772 140 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 S1PR2O95136 353 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 SERPINE2P07093 398 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 MMP9P14780 707 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 CCL3L1P16619 93 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 NDUFB7P17568 137 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 HTR2BP41595 481 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 LPAR6P43657 344 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 AP2S1P53680 142 aaPredicted RBP5.34□□□□□ -1.55
CAPN3-210ENST00000561817 PAX9P55771 341 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 ERVFRD-1P60508 538 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms