RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 GVQW1Q8N7I0 195 aa18.53■□□□□ 0.56
CDR2-202ENST00000561630 LFNGQ8NES3 379 aa18.53■□□□□ 0.56
CDR2-202ENST00000561630 BEST4Q8NFU0 473 aa18.53■□□□□ 0.56
CDR2-202ENST00000561630 ARPC1AQ92747 370 aa18.53■□□□□ 0.56
CDR2-202ENST00000561630 SRRM4A7MD48 611 aaKnown RBP18.52■□□□□ 0.56
CDR2-202ENST00000561630 SHOXO15266 292 aa18.52■□□□□ 0.56
CDR2-202ENST00000561630 XRCC3O43542 346 aa18.52■□□□□ 0.56
CDR2-202ENST00000561630 TUSC2O75896 110 aa18.52■□□□□ 0.56
CDR2-202ENST00000561630 SSBP2P81877 361 aaPredicted RBP18.52■□□□□ 0.56
CDR2-202ENST00000561630 FXYD3Q14802 87 aa18.52■□□□□ 0.56
CDR2-202ENST00000561630 ACTBL2Q562R1 376 aa18.52■□□□□ 0.56
CDR2-202ENST00000561630 PYHIN1Q6K0P9 492 aa18.52■□□□□ 0.56
CDR2-202ENST00000561630 UNQ5815/PRO19632Q6UWF5 114 aa18.52■□□□□ 0.56
CDR2-202ENST00000561630 OR11H1Q8NG94 326 aa18.52■□□□□ 0.56
CDR2-202ENST00000561630 OR5M8Q8NGP6 311 aa18.52■□□□□ 0.56
CDR2-202ENST00000561630 MRAPQ8TCY5 172 aa18.52■□□□□ 0.56
CDR2-202ENST00000561630 S100A16Q96FQ6 103 aaKnown RBP18.52■□□□□ 0.56
CDR2-202ENST00000561630 FUNDC2Q9BWH2 189 aa18.52■□□□□ 0.56
CDR2-202ENST00000561630 IGKV1D-13A0A0B4J2D9 117 aa18.51■□□□□ 0.55
CDR2-202ENST00000561630 ARPC1BO15143 372 aaKnown RBP18.51■□□□□ 0.55
CDR2-202ENST00000561630 IGLV2-14P01704 120 aa18.51■□□□□ 0.55
CDR2-202ENST00000561630 IGKV1-13P0DP09 117 aa18.51■□□□□ 0.55
CDR2-202ENST00000561630 HOXD3P31249 432 aaPredicted RBP18.51■□□□□ 0.55
CDR2-202ENST00000561630 PJVKQ0ZLH3 352 aa18.51■□□□□ 0.55
CDR2-202ENST00000561630 UBE2NLQ5JXB2 153 aa18.51■□□□□ 0.55
CDR2-202ENST00000561630 DPF1Q92782 380 aa18.51■□□□□ 0.55
CDR2-202ENST00000561630 SLC25A46Q96AG3 418 aa18.51■□□□□ 0.55
CDR2-202ENST00000561630 RBMX2Q9Y388 322 aaKnown RBP18.51■□□□□ 0.55
CDR2-202ENST00000561630 CRYZL1O95825 349 aa18.5■□□□□ 0.55
CDR2-202ENST00000561630 PTHLHP12272 177 aa18.5■□□□□ 0.55
CDR2-202ENST00000561630 ARPC4P59998 168 aa18.5■□□□□ 0.55
CDR2-202ENST00000561630 OR1N2Q8NGR9 330 aa18.5■□□□□ 0.55
CDR2-202ENST00000561630 OR13F1Q8NGS4 319 aa18.5■□□□□ 0.55
CDR2-202ENST00000561630 GRPEL2Q8TAA5 225 aa18.5■□□□□ 0.55
CDR2-202ENST00000561630 CASTOR1Q8WTX7 329 aa18.5■□□□□ 0.55
CDR2-202ENST00000561630 OR5B12Q96R08 314 aa18.5■□□□□ 0.55
CDR2-202ENST00000561630 CNIH1O95406 144 aa18.49■□□□□ 0.55
CDR2-202ENST00000561630 CBX5P45973 191 aa18.49■□□□□ 0.55
CDR2-202ENST00000561630 UBE2KP61086 200 aa18.49■□□□□ 0.55
CDR2-202ENST00000561630 NCS1P62166 190 aa18.49■□□□□ 0.55
CDR2-202ENST00000561630 GNB1P62873 340 aa18.49■□□□□ 0.55
CDR2-202ENST00000561630 SAMD12Q8N8I0 201 aa18.49■□□□□ 0.55
CDR2-202ENST00000561630 TEX45Q8NA69 505 aa18.49■□□□□ 0.55
CDR2-202ENST00000561630 OSR1Q8TAX0 266 aaPredicted RBP18.49■□□□□ 0.55
CDR2-202ENST00000561630 KCTD12Q96CX2 325 aaKnown RBP18.49■□□□□ 0.55
CDR2-202ENST00000561630 CD40LGP29965 261 aa18.48■□□□□ 0.55
CDR2-202ENST00000561630 ZNF616Q08AN1 781 aa18.48■□□□□ 0.55
CDR2-202ENST00000561630 VMA21Q3ZAQ7 101 aa18.48■□□□□ 0.55
CDR2-202ENST00000561630 KCTD9Q7L273 389 aa18.48■□□□□ 0.55
CDR2-202ENST00000561630 OVCH2Q7RTZ1 564 aa18.48■□□□□ 0.55
CDR2-202ENST00000561630 SNAPC3Q92966 411 aa18.48■□□□□ 0.55
CDR2-202ENST00000561630 PRELID3BQ9Y3B1 194 aa18.48■□□□□ 0.55
CDR2-202ENST00000561630 OR8U8P0C7N1 319 aa18.47■□□□□ 0.55
CDR2-202ENST00000561630 SMIM18P0DKX4 95 aa18.47■□□□□ 0.55
CDR2-202ENST00000561630 FCGR2CP31995 323 aa18.47■□□□□ 0.55
CDR2-202ENST00000561630 VBP1P61758 197 aa18.47■□□□□ 0.55
CDR2-202ENST00000561630 RPL30P62888 115 aaKnown RBP18.47■□□□□ 0.55
CDR2-202ENST00000561630 EIF4EBP1Q13541 118 aaPredicted RBP18.47■□□□□ 0.55
CDR2-202ENST00000561630 MRGPRG-AS1Q2M3A8 158 aa18.47■□□□□ 0.55
CDR2-202ENST00000561630 ASPHD1Q5U4P2 390 aa18.47■□□□□ 0.55
CDR2-202ENST00000561630 HSD17B10Q99714 261 aaKnown RBP18.47■□□□□ 0.55
CDR2-202ENST00000561630 SLA2Q9H6Q3 261 aa18.47■□□□□ 0.55
CDR2-202ENST00000561630 K7EIL1 84 aa18.46■□□□□ 0.55
CDR2-202ENST00000561630 FCGR3BO75015 233 aa18.46■□□□□ 0.55
CDR2-202ENST00000561630 PRSS8Q16651 343 aa18.46■□□□□ 0.55
CDR2-202ENST00000561630 TMEM69Q5SWH9 247 aa18.46■□□□□ 0.55
CDR2-202ENST00000561630 TMEM68Q96MH6 324 aa18.46■□□□□ 0.55
CDR2-202ENST00000561630 MS4A10Q96PG2 267 aa18.46■□□□□ 0.55
CDR2-202ENST00000561630 MRPS7Q9Y2R9 242 aaKnown RBP18.46■□□□□ 0.55
CDR2-202ENST00000561630 FCER2P06734 321 aa18.45■□□□□ 0.54
CDR2-202ENST00000561630 LGALS1P09382 135 aaKnown RBP18.45■□□□□ 0.54
CDR2-202ENST00000561630 AADACP22760 399 aa18.45■□□□□ 0.54
CDR2-202ENST00000561630 MSMO1Q15800 293 aa18.45■□□□□ 0.54
CDR2-202ENST00000561630 OR5AP2Q8NGF4 316 aa18.45■□□□□ 0.54
CDR2-202ENST00000561630 ALX4Q9H161 411 aaPredicted RBP18.45■□□□□ 0.54
CDR2-202ENST00000561630 ZMAT5Q9UDW3 170 aaKnown RBP18.45■□□□□ 0.54
CDR2-202ENST00000561630 WI2-2373I1.2A0A1W2PRP0 233 aa18.44■□□□□ 0.54
CDR2-202ENST00000561630 MEIS3P1A6NDR6 274 aa18.44■□□□□ 0.54
CDR2-202ENST00000561630 H3BUA1 57 aa18.44■□□□□ 0.54
CDR2-202ENST00000561630 PPYP01298 95 aa18.44■□□□□ 0.54
CDR2-202ENST00000561630 TPPP2P59282 170 aa18.44■□□□□ 0.54
CDR2-202ENST00000561630 TAS2R20P59543 309 aa18.44■□□□□ 0.54
CDR2-202ENST00000561630 C9orf66Q5T8R8 295 aa18.44■□□□□ 0.54
CDR2-202ENST00000561630 ZNF66Q6ZN08 573 aa18.44■□□□□ 0.54
CDR2-202ENST00000561630 IDO2Q6ZQW0 420 aa18.44■□□□□ 0.54
CDR2-202ENST00000561630 MFSD4AQ8N468 514 aa18.44■□□□□ 0.54
CDR2-202ENST00000561630 POC5Q8NA72 575 aa18.44■□□□□ 0.54
CDR2-202ENST00000561630 DCUN1D5Q9BTE7 237 aa18.44■□□□□ 0.54
CDR2-202ENST00000561630 SEC14L6B5MCN3 397 aa18.43■□□□□ 0.54
CDR2-202ENST00000561630 SAA1P0DJI8 122 aaPredicted RBP18.43■□□□□ 0.54
CDR2-202ENST00000561630 OR2B11Q5JQS5 317 aa18.43■□□□□ 0.54
CDR2-202ENST00000561630 OR5T1Q8NG75 326 aa18.43■□□□□ 0.54
CDR2-202ENST00000561630 SECTM1Q8WVN6 248 aa18.43■□□□□ 0.54
CDR2-202ENST00000561630 TCTEX1D2Q8WW35 142 aa18.43■□□□□ 0.54
CDR2-202ENST00000561630 GIMAP1Q8WWP7 306 aa18.43■□□□□ 0.54
CDR2-202ENST00000561630 RHOVQ96L33 236 aa18.43■□□□□ 0.54
CDR2-202ENST00000561630 IFT46Q9NQC8 304 aa18.43■□□□□ 0.54
CDR2-202ENST00000561630 TAS2R8Q9NYW2 309 aa18.43■□□□□ 0.54
CDR2-202ENST00000561630 COMMD3Q9UBI1 195 aa18.43■□□□□ 0.54
CDR2-202ENST00000561630 ANAPC10Q9UM13 185 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms