RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 UBAC2Q8NBM4 344 aa6.67□□□□□ -1.34
PALB2-202ENST00000561514 TMEM104Q8NE00 496 aa6.67□□□□□ -1.34
PALB2-202ENST00000561514 OR56B1Q8NGI3 324 aa6.67□□□□□ -1.34
PALB2-202ENST00000561514 ZNF596Q8TC21 504 aa6.67□□□□□ -1.34
PALB2-202ENST00000561514 C15orf40Q8WUR7 153 aa6.67□□□□□ -1.34
PALB2-202ENST00000561514 HIST1H2BAQ96A08 127 aa6.67□□□□□ -1.34
PALB2-202ENST00000561514 SPSB1Q96BD6 273 aa6.67□□□□□ -1.34
PALB2-202ENST00000561514 BORCS8Q96FH0 119 aa6.67□□□□□ -1.34
PALB2-202ENST00000561514 FAM210BQ96KR6 192 aa6.67□□□□□ -1.34
PALB2-202ENST00000561514 B9D2Q9BPU9 175 aa6.67□□□□□ -1.34
PALB2-202ENST00000561514 SLC25A33Q9BSK2 321 aa6.67□□□□□ -1.34
PALB2-202ENST00000561514 THAP7Q9BT49 309 aaPredicted RBP6.67□□□□□ -1.34
PALB2-202ENST00000561514 CHST6Q9GZX3 395 aa6.67□□□□□ -1.34
PALB2-202ENST00000561514 LINC00574Q9H8X3 128 aa6.67□□□□□ -1.34
PALB2-202ENST00000561514 RHOFQ9HBH0 211 aa6.67□□□□□ -1.34
PALB2-202ENST00000561514 TXNL4BQ9NX01 149 aaKnown RBP6.67□□□□□ -1.34
PALB2-202ENST00000561514 IGKV1-12A0A0C4DH73 117 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 TRDV1A0A1B0GX56 115 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 A0A1W2PRX2 142 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 TCRBV4S1A1TA0A5B7 111 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 BUB1B-PAK6H3BSN5 160 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 K7EP13 123 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 LCE2BO14633 110 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 GSTZ1O43708 216 aaPredicted RBP6.66□□□□□ -1.34
PALB2-202ENST00000561514 IGKV1D-12P01611 117 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 ISG15P05161 165 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 GSTP1P09211 210 aaKnown RBP6.66□□□□□ -1.34
PALB2-202ENST00000561514 CD3GP09693 182 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 CGB3P0DN86 165 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 CGB7P0DN87 165 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 RAB5AP20339 215 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 BCL3P20749 454 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 DTYMKP23919 212 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 CDK2P24941 298 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 RPS20P60866 119 aaKnown RBP6.66□□□□□ -1.34
PALB2-202ENST00000561514 RHEBQ15382 184 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 ABCA11PQ4W5N1 156 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 TPTE2P1Q5T6R2 138 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 PRAMEF5Q5TYX0 476 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 FDX2Q6P4F2 183 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 CD200R1LQ6Q8B3 271 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 C10orf99Q6UWK7 81 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 LHFPL2Q6ZUX7 228 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 MRPL41Q8IXM3 137 aaKnown RBP6.66□□□□□ -1.34
PALB2-202ENST00000561514 ZFP82Q8N141 532 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 TOMM5Q8N4H5 51 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 TCEANCQ8N8B7 351 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 NUDT10Q8NFP7 164 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 RNASEH2CQ8TDP1 164 aaKnown RBP6.66□□□□□ -1.34
PALB2-202ENST00000561514 PCNPQ8WW12 178 aaKnown RBP6.66□□□□□ -1.34
PALB2-202ENST00000561514 ADAT3Q96EY9 351 aaPredicted RBP6.66□□□□□ -1.34
PALB2-202ENST00000561514 COQ2Q96H96 371 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 TMEM208Q9BTX3 173 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 ZNF286AQ9HBT8 521 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.66□□□□□ -1.34
PALB2-202ENST00000561514 MGAT4CQ9UBM8 478 aa6.66□□□□□ -1.34
PALB2-202ENST00000561514 LSM2Q9Y333 95 aaKnown RBP6.66□□□□□ -1.34
PALB2-202ENST00000561514 RPL36Q9Y3U8 105 aaKnown RBP6.66□□□□□ -1.34
PALB2-202ENST00000561514 PUS1Q9Y606 427 aaKnown RBP eCLIP6.66□□□□□ -1.34
PALB2-202ENST00000561514 DNAH1Q9P2D7 4330 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 TRGV10A0A0A0MS01 117 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 ODAMA1E959 279 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 CBY3A6NI87 242 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 OGG1O15527 345 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 FGF16O43320 207 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 SIX6O95475 246 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 OR2H2O95918 312 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 ATF1P18846 271 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 CEACAM3P40198 252 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 THBS3P49746 956 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 ATP1B3P54709 279 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 SNRPGP62308 76 aaKnown RBP6.65□□□□□ -1.34
PALB2-202ENST00000561514 RPL23AP62750 156 aaKnown RBP6.65□□□□□ -1.34
PALB2-202ENST00000561514 RBX1P62877 108 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 TPBGQ13641 420 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 SMN1Q16637 294 aaKnown RBP6.65□□□□□ -1.34
PALB2-202ENST00000561514 C17orf58Q2M2W7 97 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 ARSJQ5FYB0 599 aaPredicted RBP6.65□□□□□ -1.34
PALB2-202ENST00000561514 LIPKQ5VXJ0 399 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 RAB12Q6IQ22 244 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 CCDC144NLQ6NUI1 221 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 ZNF529Q6P280 563 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 Q6P435 159 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 CENPVQ7Z7K6 275 aaPredicted RBP6.65□□□□□ -1.34
PALB2-202ENST00000561514 SAXO1Q8IYX7 474 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 CHST4Q8NCG5 386 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 SMIM8Q96KF7 97 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 RHOVQ96L33 236 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 WWC2-AS2Q96NR7 200 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 P2RX4Q99571 388 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 TXN2Q99757 166 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 RNF167Q9H6Y7 350 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 H2AFY2Q9P0M6 372 aaPredicted RBP6.65□□□□□ -1.34
PALB2-202ENST00000561514 CLEC2DQ9UHP7 191 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 MOB4Q9Y3A3 225 aa6.65□□□□□ -1.34
PALB2-202ENST00000561514 DSCAML1Q8TD84 2053 aa6.65□□□□□ -1.35
PALB2-202ENST00000561514 RYR2Q92736 4967 aa6.65□□□□□ -1.35
PALB2-202ENST00000561514 A0A1W2PPI3 338 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 J3QRE1 110 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 MFNGO00587 321 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms