RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 ANAPC10Q9UM13 185 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 A0A075B6Q4 140 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 IGKV1D-8A0A087WSZ0 117 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 TRGV10A0A0A0MS01 117 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 IGHV2-26A0A0B4J1V2 119 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 TRAV40A0A0B4J280 105 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 IGHV1-69DA0A0B4J2H0 117 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 SMIM31A0A1B0GVY4 71 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 FUOMA2VDF0 154 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 IFITM10A6NMD0 228 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 ZNF729A6NN14 1252 aaPredicted RBP4.76□□□□□ -1.65
LRRC28-220ENST00000561253 SERPINE3A8MV23 424 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 MCRIP1C9JLW8 97 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 LY6LH3BQJ8 138 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 ORC5O43913 435 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 CLPXO76031 633 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 IGLV2-11P01706 119 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 IGHV1-69P01742 117 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 HLA-DQB1P01920 261 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 APOA1P02647 267 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 FAM157CP0CG43 387 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 ELK1P19419 428 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 OMGP23515 440 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 MNDAP41218 407 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 GLP1RP43220 463 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 RANBP1P43487 201 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 RORCP51449 518 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 UBE2E1P51965 193 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 RBM39Q14498 530 aaKnown RBP4.76□□□□□ -1.65
LRRC28-220ENST00000561253 HERPUD1Q15011 391 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 PRAMEF5Q5TYX0 476 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 METTL11BQ5VVY1 283 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 HACD4Q5VWC8 232 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 Q6ZS49 121 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 DYNAPQ8N1N2 210 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 PNKDQ8N490 385 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 SAMD12Q8N8I0 201 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 ZNF439Q8NDP4 499 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 OR4P4Q8NGL7 312 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 OR4K15Q8NH41 348 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 OR1L1Q8NH94 360 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 MRGPRDQ8TDS7 321 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 C17orf50Q8WW18 174 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 ACOT12Q8WYK0 555 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 NEDD4LQ96PU5 975 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 TOLLIPQ9H0E2 274 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 AUNIPQ9H7T9 357 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 C12orf4Q9NQ89 552 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 PLEKHJ1Q9NW61 149 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 ZNRD1Q9P1U0 126 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 ONECUT1Q9UBC0 465 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 RSL24D1Q9UHA3 163 aaKnown RBP4.76□□□□□ -1.65
LRRC28-220ENST00000561253 NBEAL1Q6ZS30 2694 aa4.76□□□□□ -1.65
LRRC28-220ENST00000561253 IGHV3OR16-10A0A075B7F0 116 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 METTL21EPA6NDL7 271 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 TMEM235A6NFC5 223 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 CIDEAO60543 219 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 HPGDSO60760 199 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 HBZP02008 142 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 FCGR3AP08637 254 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 PTHLHP12272 177 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 GZMHP20718 246 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 DTYMKP23919 212 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 SAA4P35542 130 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 ZNF137PP52743 207 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 BPIFB3P59826 476 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 HTD2P86397 168 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 FAM189A2Q15884 450 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 CHRFAM7AQ494W8 412 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 CDNFQ49AH0 187 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 UBE2NLQ5JXB2 153 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 NCR3LG1Q68D85 454 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 BRD3OSQ6XYD6 125 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 MOB1BQ7L9L4 216 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 LAX1Q8IWV1 398 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 LINC00311Q8N616 119 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 STPG4Q8N801 248 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 C8orf31Q8N9H6 132 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 ZNF565Q8N9K5 539 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 OR10A7Q8NGE5 316 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 OR52M1Q8NGK5 317 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 RFESDQ8TAC1 157 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 UBALD1Q8TB05 177 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 NANPQ8TBE9 248 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 LHX4Q969G2 390 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 ST6GALNAC6Q969X2 333 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 DGCR14Q96DF8 476 aaKnown RBP4.75□□□□□ -1.65
LRRC28-220ENST00000561253 AGMATQ9BSE5 352 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 CABLES2Q9BTV7 478 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 PARP12Q9H0J9 701 aaKnown RBP4.75□□□□□ -1.65
LRRC28-220ENST00000561253 ATG5Q9H1Y0 275 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 TMEM133Q9H2Q1 129 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 RIMS4Q9H426 269 aaPredicted RBP4.75□□□□□ -1.65
LRRC28-220ENST00000561253 TAF9BQ9HBM6 251 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 ZNF286AQ9HBT8 521 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 ESM1Q9NQ30 184 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 IDI2-AS1Q9NZ38 188 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 NUP50Q9UKX7 468 aa4.75□□□□□ -1.65
LRRC28-220ENST00000561253 TRAV18A0A075B6X5 111 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 A0A0U1RQK1 487 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms