RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 WSB1Q9Y6I7 421 aa11.96□□□□□ -0.49
SNRPA1-213ENST00000560856 TPPPO94811 219 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 PMP2P02689 132 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 ELANEP08246 267 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 PJVKQ0ZLH3 352 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 FOXE3Q13461 319 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 RTL8BQ17RB0 113 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 TEX38Q6PEX7 206 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 ZNF562Q6V9R5 426 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 LCNL1Q6ZST4 164 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 LAX1Q8IWV1 398 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 MINDY2Q8NBR6 621 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 OR4F17Q8NGA8 305 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 SECTM1Q8WVN6 248 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 HARBI1Q96MB7 349 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 OR4F4Q96R69 305 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 GPHA2Q96T91 129 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 GON7Q9BXV9 100 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 SLIRPQ9GZT3 109 aaKnown RBP11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 RBM38Q9H0Z9 239 aaKnown RBP11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 PARP11Q9NR21 331 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 ZFP57Q9NU63 452 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 EHFQ9NZC4 300 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 EXTL2Q9UBQ6 330 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 MEGF8Q7Z7M0 2845 aa11.95□□□□□ -0.5
SNRPA1-213ENST00000560856 ARPC1BO15143 372 aaKnown RBP11.94□□□□□ -0.5
SNRPA1-213ENST00000560856 CRYZL1O95825 349 aa11.94□□□□□ -0.5
SNRPA1-213ENST00000560856 IGLV1-40P01703 118 aa11.94□□□□□ -0.5
SNRPA1-213ENST00000560856 RPLP1P05386 114 aaKnown RBP11.94□□□□□ -0.5
SNRPA1-213ENST00000560856 PSMB8P28062 276 aa11.94□□□□□ -0.5
SNRPA1-213ENST00000560856 TAS2R46P59540 309 aa11.94□□□□□ -0.5
SNRPA1-213ENST00000560856 KIAA0141Q14154 515 aaPredicted RBP11.94□□□□□ -0.5
SNRPA1-213ENST00000560856 PLGLAQ15195 96 aa11.94□□□□□ -0.5
SNRPA1-213ENST00000560856 MFSD4AQ8N468 514 aa11.94□□□□□ -0.5
SNRPA1-213ENST00000560856 MYOZ3Q8TDC0 251 aa11.94□□□□□ -0.5
SNRPA1-213ENST00000560856 CLCC1Q96S66 551 aa11.94□□□□□ -0.5
SNRPA1-213ENST00000560856 HSD17B10Q99714 261 aaKnown RBP11.94□□□□□ -0.5
SNRPA1-213ENST00000560856 SLC5A7Q9GZV3 580 aa11.94□□□□□ -0.5
SNRPA1-213ENST00000560856 TRAV41A0A0B4J266 112 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 SHOXO15266 292 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 SOX15O60248 233 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 FCGR3BO75015 233 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 CA2P00918 260 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 VDAC1P21796 283 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 HLA-DMAP28067 261 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 GNRHRP30968 328 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 RCVRNP35243 200 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 HRH1P35367 487 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 ZNF66Q6ZN08 573 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 ETV3LQ6ZN32 361 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 KCTD9Q7L273 389 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 PPP1R27Q86WC6 154 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 ZBTB34Q8NCN2 500 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 WFDC9Q8NEX5 89 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 OR5H2Q8NGV7 314 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 OR52I2Q8NH67 350 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 OSR1Q8TAX0 266 aaPredicted RBP11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 MOB3AQ96BX8 217 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 NXF2Q9GZY0 626 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 KLK15Q9H2R5 256 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 TAS2R8Q9NYW2 309 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 KLK11Q9UBX7 282 aa11.93□□□□□ -0.5
SNRPA1-213ENST00000560856 FXYD4P59646 89 aa11.92□□□□□ -0.5
SNRPA1-213ENST00000560856 UBE2KP61086 200 aa11.92□□□□□ -0.5
SNRPA1-213ENST00000560856 OR2B11Q5JQS5 317 aa11.92□□□□□ -0.5
SNRPA1-213ENST00000560856 CXorf66Q5JRM2 361 aaPredicted RBP11.92□□□□□ -0.5
SNRPA1-213ENST00000560856 KHDC1LQ5JSQ8 128 aa11.92□□□□□ -0.5
SNRPA1-213ENST00000560856 ZNF818PQ6ZRF7 136 aa11.92□□□□□ -0.5
SNRPA1-213ENST00000560856 TEX45Q8NA69 505 aa11.92□□□□□ -0.5
SNRPA1-213ENST00000560856 ZNF2Q9BSG1 426 aaPredicted RBP11.92□□□□□ -0.5
SNRPA1-213ENST00000560856 FAM103A1Q9BTL3 118 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-213ENST00000560856 MTFP1Q9UDX5 166 aa11.92□□□□□ -0.5
SNRPA1-213ENST00000560856 PRELID3BQ9Y3B1 194 aa11.92□□□□□ -0.5
SNRPA1-213ENST00000560856 RGS5O15539 181 aa11.91□□□□□ -0.5
SNRPA1-213ENST00000560856 CDX1P47902 265 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-213ENST00000560856 CBX3Q13185 183 aa11.91□□□□□ -0.5
SNRPA1-213ENST00000560856 FXYD3Q14802 87 aa11.91□□□□□ -0.5
SNRPA1-213ENST00000560856 AKIRIN2Q53H80 203 aa11.91□□□□□ -0.5
SNRPA1-213ENST00000560856 TMEM17Q86X19 198 aa11.91□□□□□ -0.5
SNRPA1-213ENST00000560856 TCTEX1D2Q8WW35 142 aa11.91□□□□□ -0.5
SNRPA1-213ENST00000560856 SOSTQ9BQB4 213 aa11.91□□□□□ -0.5
SNRPA1-213ENST00000560856 FXYD6Q9H0Q3 95 aa11.91□□□□□ -0.5
SNRPA1-213ENST00000560856 TNFSF12O43508 249 aa11.9□□□□□ -0.5
SNRPA1-213ENST00000560856 NOL3O60936 208 aaKnown RBP11.9□□□□□ -0.5
SNRPA1-213ENST00000560856 SAA1P0DJI8 122 aaPredicted RBP11.9□□□□□ -0.5
SNRPA1-213ENST00000560856 PF4V1P10720 104 aa11.9□□□□□ -0.5
SNRPA1-213ENST00000560856 HERV-K104P61576 105 aa11.9□□□□□ -0.5
SNRPA1-213ENST00000560856 DGCR2P98153 550 aa11.9□□□□□ -0.5
SNRPA1-213ENST00000560856 PRSS8Q16651 343 aa11.9□□□□□ -0.5
SNRPA1-213ENST00000560856 ECSCRQ19T08 205 aa11.9□□□□□ -0.5
SNRPA1-213ENST00000560856 RNASE12Q5GAN4 147 aaKnown RBP11.9□□□□□ -0.5
SNRPA1-213ENST00000560856 VAX1Q5SQQ9 334 aa11.9□□□□□ -0.5
SNRPA1-213ENST00000560856 IDO2Q6ZQW0 420 aa11.9□□□□□ -0.5
SNRPA1-213ENST00000560856 C8orf86Q6ZUL3 223 aa11.9□□□□□ -0.5
SNRPA1-213ENST00000560856 ZNF695Q8IW36 515 aa11.9□□□□□ -0.5
SNRPA1-213ENST00000560856 LFNGQ8NES3 379 aa11.9□□□□□ -0.5
SNRPA1-213ENST00000560856 OR6F1Q8NGZ6 308 aa11.9□□□□□ -0.5
SNRPA1-213ENST00000560856 ARPC1AQ92747 370 aa11.9□□□□□ -0.5
SNRPA1-213ENST00000560856 M0QYG6 137 aa11.89□□□□□ -0.51
SNRPA1-213ENST00000560856 RBFOX2O43251 390 aaKnown RBP eCLIP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms