RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 GPHA2Q96T91 129 aa9.67□□□□□ -0.86
AC087878.1-201ENST00000560709 NARFLQ9H6Q4 476 aa9.67□□□□□ -0.86
AC087878.1-201ENST00000560709 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.67□□□□□ -0.86
AC087878.1-201ENST00000560709 OR5AC2Q9NZP5 309 aa9.67□□□□□ -0.86
AC087878.1-201ENST00000560709 RELNP78509 3460 aa9.67□□□□□ -0.86
AC087878.1-201ENST00000560709 MARCH11A6NNE9 402 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 FCGR3BO75015 233 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 PROP1O75360 226 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 PITX3O75364 302 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 JTBO76095 146 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 SCAF4O95104 1147 aaKnown RBP9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 S1PR2O95136 353 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 HRASP01112 189 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 IGKV1-39P01597 117 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 IGLV1-47P01700 117 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 IGHV3-7P01780 117 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 IGKV1D-39P04432 117 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 TPT1P13693 172 aaKnown RBP9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 MC5RP33032 325 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 CEACAM3P40198 252 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 TAS2R30P59541 319 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 PDPNQ86YL7 162 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 TGIF2LXQ8IUE1 241 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 OR5AN1Q8NGI8 311 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 OSR1Q8TAX0 266 aaPredicted RBP9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 LRRC20Q8TCA0 184 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 SCARB1Q8WTV0 552 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 ST6GALNAC6Q969X2 333 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 ZNF471Q9BX82 626 aaPredicted RBP9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 SLC35D1Q9NTN3 355 aa9.66□□□□□ -0.86
AC087878.1-201ENST00000560709 BORCS7-ASMTA0A0B4J1R7 106 aa9.65□□□□□ -0.86
AC087878.1-201ENST00000560709 A0A1W2PPE3 182 aa9.65□□□□□ -0.86
AC087878.1-201ENST00000560709 OOSP1A8MZH6 123 aa9.65□□□□□ -0.86
AC087878.1-201ENST00000560709 RAMP3O60896 148 aa9.65□□□□□ -0.86
AC087878.1-201ENST00000560709 IGKV1-5P01602 117 aa9.65□□□□□ -0.86
AC087878.1-201ENST00000560709 P0C879 139 aa9.65□□□□□ -0.86
AC087878.1-201ENST00000560709 HKR1P10072 659 aa9.65□□□□□ -0.86
AC087878.1-201ENST00000560709 EPHA1P21709 976 aa9.65□□□□□ -0.86
AC087878.1-201ENST00000560709 BAXQ07812 192 aa9.65□□□□□ -0.86
AC087878.1-201ENST00000560709 ZNF816Q0VGE8 651 aaPredicted RBP9.65□□□□□ -0.86
AC087878.1-201ENST00000560709 POU2AF1Q16633 256 aa9.65□□□□□ -0.86
AC087878.1-201ENST00000560709 STOML3Q8TAV4 291 aa9.65□□□□□ -0.86
AC087878.1-201ENST00000560709 R3HDM4Q96D70 268 aa9.65□□□□□ -0.86
AC087878.1-201ENST00000560709 MBD6Q96DN6 1003 aa9.65□□□□□ -0.86
AC087878.1-201ENST00000560709 PERPQ96FX8 193 aa9.65□□□□□ -0.86
AC087878.1-201ENST00000560709 PSMG3-AS1Q96PY0 264 aa9.65□□□□□ -0.86
AC087878.1-201ENST00000560709 CACNG5Q9UF02 275 aa9.65□□□□□ -0.86
AC087878.1-201ENST00000560709 USF3Q68DE3 2245 aa9.65□□□□□ -0.86
AC087878.1-201ENST00000560709 MALRD1Q5VYJ5 2156 aa9.65□□□□□ -0.86
AC087878.1-201ENST00000560709 BUB1B-PAK6H3BSN5 160 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 KRASP01116 189 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 GAPDHP04406 335 aaKnown RBP9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 FGF2P09038 288 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 CT45A6P0DMU7 189 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 CT45A5P0DMU8 189 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 CT45A7P0DMV0 189 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 BRWD1-AS2P59051 145 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 PAX2Q02962 417 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 EXOSC2Q13868 293 aaKnown RBP9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 OR2B11Q5JQS5 317 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 CXorf66Q5JRM2 361 aaPredicted RBP9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 CLLU1Q5K131 121 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 MINOS1Q5TGZ0 78 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 OR8H3Q8N146 312 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 OR2C3Q8N628 320 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 Q8N7P7 452 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 ZNF383Q8NA42 475 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 OR4C13Q8NGP0 309 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 OR4A5Q8NH83 315 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 VSTM2AQ8TAG5 236 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 ST8SIA2Q92186 375 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 RPEQ96AT9 228 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 CIB3Q96Q77 187 aaPredicted RBP9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 CLCC1Q96S66 551 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 RCL1Q9Y2P8 373 aaKnown RBP9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 WASHC3Q9Y3C0 194 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 WSB1Q9Y6I7 421 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 MINOS1-NBL1R4GNA1 71 aa9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 SMG1Q96Q15 3661 aaKnown RBP9.64□□□□□ -0.87
AC087878.1-201ENST00000560709 SPTAN1Q13813 2472 aaKnown RBP9.63□□□□□ -0.87
AC087878.1-201ENST00000560709 ODF3BA8MYP8 253 aa9.63□□□□□ -0.87
AC087878.1-201ENST00000560709 LEUTXA8MZ59 168 aa9.63□□□□□ -0.87
AC087878.1-201ENST00000560709 H0YJW9 148 aa9.63□□□□□ -0.87
AC087878.1-201ENST00000560709 SYNGR2O43760 224 aa9.63□□□□□ -0.87
AC087878.1-201ENST00000560709 CHST1O43916 411 aa9.63□□□□□ -0.87
AC087878.1-201ENST00000560709 USF1P22415 310 aaPredicted RBP9.63□□□□□ -0.87
AC087878.1-201ENST00000560709 GATA3P23771 443 aa9.63□□□□□ -0.87
AC087878.1-201ENST00000560709 ZFP36P26651 326 aaKnown RBP9.63□□□□□ -0.87
AC087878.1-201ENST00000560709 HTR1DP28221 377 aa9.63□□□□□ -0.87
AC087878.1-201ENST00000560709 G6PCP35575 357 aa9.63□□□□□ -0.87
AC087878.1-201ENST00000560709 HTR2BP41595 481 aa9.63□□□□□ -0.87
AC087878.1-201ENST00000560709 DVL1P1P54792 670 aaPredicted RBP9.63□□□□□ -0.87
AC087878.1-201ENST00000560709 ARF6P62330 175 aa9.63□□□□□ -0.87
AC087878.1-201ENST00000560709 POLR2GP62487 172 aaKnown RBP eCLIP9.63□□□□□ -0.87
AC087878.1-201ENST00000560709 RPP30P78346 268 aaKnown RBP9.63□□□□□ -0.87
AC087878.1-201ENST00000560709 LCN2P80188 198 aa9.63□□□□□ -0.87
AC087878.1-201ENST00000560709 CLEC12BQ2HXU8 276 aa9.63□□□□□ -0.87
AC087878.1-201ENST00000560709 DEFB113Q30KQ7 82 aa9.63□□□□□ -0.87
AC087878.1-201ENST00000560709 AARDQ4LEZ3 155 aa9.63□□□□□ -0.87
AC087878.1-201ENST00000560709 MIDNQ504T8 468 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms