RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 ZNF343Q6P1L6 599 aa7.94□□□□□ -1.14
CDC42BPB-207ENST00000560492 ZNF367Q7RTV3 350 aa7.94□□□□□ -1.14
CDC42BPB-207ENST00000560492 CDH26Q8IXH8 852 aa7.94□□□□□ -1.14
CDC42BPB-207ENST00000560492 THRSPQ92748 146 aa7.94□□□□□ -1.14
CDC42BPB-207ENST00000560492 USMG5Q96IX5 58 aa7.94□□□□□ -1.14
CDC42BPB-207ENST00000560492 HARBI1Q96MB7 349 aa7.94□□□□□ -1.14
CDC42BPB-207ENST00000560492 THAP7Q9BT49 309 aaPredicted RBP7.94□□□□□ -1.14
CDC42BPB-207ENST00000560492 C11orf54Q9H0W9 315 aaPredicted RBP7.94□□□□□ -1.14
CDC42BPB-207ENST00000560492 MRPS18AQ9NVS2 196 aaKnown RBP7.94□□□□□ -1.14
CDC42BPB-207ENST00000560492 PLEKHJ1Q9NW61 149 aa7.94□□□□□ -1.14
CDC42BPB-207ENST00000560492 CLEC2DQ9UHP7 191 aa7.94□□□□□ -1.14
CDC42BPB-207ENST00000560492 DIMT1Q9UNQ2 313 aaKnown RBP7.94□□□□□ -1.14
CDC42BPB-207ENST00000560492 SELENOKQ9Y6D0 94 aa7.94□□□□□ -1.14
CDC42BPB-207ENST00000560492 ALMS1Q8TCU4 4167 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 TRBV5-7A0A0A0MS05 114 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 DPPA5A6NC42 116 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 FAM229AH3BQW9 127 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 SHOXO15266 292 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 AIREO43918 545 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 TUSC2O75896 110 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 UBBP0CG47 229 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 HSMCR30P0CW71 290 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 RPS11P62280 158 aaKnown RBP eCLIP7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 HLA-DRB3P79483 266 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 MED22Q15528 200 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 TNXAQ16473 311 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 SLC16A13Q7RTY0 426 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 LAX1Q8IWV1 398 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 ZNF383Q8NA42 475 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 ACOT12Q8WYK0 555 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 TMEM68Q96MH6 324 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 DERL3Q96Q80 235 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 UQCC2Q9BRT2 126 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 KCNK15Q9H427 330 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 ACOT13Q9NPJ3 140 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 SIGLEC8Q9NYZ4 499 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 NDUFA13Q9P0J0 144 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 GHRLQ9UBU3 117 aa7.93□□□□□ -1.14
CDC42BPB-207ENST00000560492 SMIM31A0A1B0GVY4 71 aa7.92□□□□□ -1.14
CDC42BPB-207ENST00000560492 NUPR2A6NF83 97 aa7.92□□□□□ -1.14
CDC42BPB-207ENST00000560492 PRH1P02810 166 aa7.92□□□□□ -1.14
CDC42BPB-207ENST00000560492 CELP19835 753 aa7.92□□□□□ -1.14
CDC42BPB-207ENST00000560492 MAPK3P27361 379 aaPredicted RBP7.92□□□□□ -1.14
CDC42BPB-207ENST00000560492 HTR2CP28335 458 aa7.92□□□□□ -1.14
CDC42BPB-207ENST00000560492 ALDH3B2P48448 385 aa7.92□□□□□ -1.14
CDC42BPB-207ENST00000560492 TAS2R43P59537 309 aa7.92□□□□□ -1.14
CDC42BPB-207ENST00000560492 RPS27AP62979 156 aaKnown RBP7.92□□□□□ -1.14
CDC42BPB-207ENST00000560492 RHOGP84095 191 aa7.92□□□□□ -1.14
CDC42BPB-207ENST00000560492 ATP5G2Q06055 141 aa7.92□□□□□ -1.14
CDC42BPB-207ENST00000560492 LINC00322Q6ZN03 302 aaPredicted RBP7.92□□□□□ -1.14
CDC42BPB-207ENST00000560492 PGLYRP3Q96LB9 341 aa7.92□□□□□ -1.14
CDC42BPB-207ENST00000560492 NICN1Q9BSH3 213 aa7.92□□□□□ -1.14
CDC42BPB-207ENST00000560492 HDHD3Q9BSH5 251 aaPredicted RBP7.92□□□□□ -1.14
CDC42BPB-207ENST00000560492 RBM7Q9Y580 266 aaKnown RBP7.92□□□□□ -1.14
CDC42BPB-207ENST00000560492 MSGN1A6NI15 193 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 BMPR1BO00238 502 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 ITGB1BP1O14713 200 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 ACTL6BO94805 426 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 NAPSAO96009 420 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 SCTP09683 121 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 OR9G9P0C7N8 305 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 WNT4P56705 351 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 MRPS15P82914 257 aaKnown RBP7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 IRF3Q14653 427 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 RTL8BQ17RB0 113 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 VMA21Q3ZAQ7 101 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 UBE2UQ5VVX9 321 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 GLT8D1Q68CQ7 371 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 OR52B4Q8NGK2 314 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 KCNG3Q8TAE7 436 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 WDR89Q96FK6 387 aaPredicted RBP7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 AGMATQ9BSE5 352 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 GGTLC1Q9BX51 225 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 OR2D2Q9H210 308 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 RIMS4Q9H426 269 aaPredicted RBP7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 AKIP1Q9NQ31 210 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 AK3Q9UIJ7 227 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 MGAT4AQ9UM21 535 aa7.91□□□□□ -1.14
CDC42BPB-207ENST00000560492 A0A0J9YWU9 116 aa7.9□□□□□ -1.14
CDC42BPB-207ENST00000560492 FAM223BA6NKX1 122 aa7.9□□□□□ -1.14
CDC42BPB-207ENST00000560492 ZNF785A8K8V0 405 aa7.9□□□□□ -1.14
CDC42BPB-207ENST00000560492 PPP5D1E7EU14 171 aa7.9□□□□□ -1.14
CDC42BPB-207ENST00000560492 BET1O15155 118 aa7.9□□□□□ -1.14
CDC42BPB-207ENST00000560492 FOLR2P14207 255 aa7.9□□□□□ -1.14
CDC42BPB-207ENST00000560492 SSBP2P81877 361 aaPredicted RBP7.9□□□□□ -1.14
CDC42BPB-207ENST00000560492 SPHARQ15513 63 aa7.9□□□□□ -1.14
CDC42BPB-207ENST00000560492 DEFB114Q30KQ6 69 aa7.9□□□□□ -1.14
CDC42BPB-207ENST00000560492 ZNF880Q6PDB4 577 aa7.9□□□□□ -1.14
CDC42BPB-207ENST00000560492 CLVS1Q8IUQ0 354 aaPredicted RBP7.9□□□□□ -1.14
CDC42BPB-207ENST00000560492 FAM223AQ8IWN6 122 aa7.9□□□□□ -1.14
CDC42BPB-207ENST00000560492 NANOGP1Q8N7R0 232 aa7.9□□□□□ -1.14
CDC42BPB-207ENST00000560492 OR13F1Q8NGS4 319 aa7.9□□□□□ -1.14
CDC42BPB-207ENST00000560492 URM1Q9BTM9 101 aaKnown RBP7.9□□□□□ -1.14
CDC42BPB-207ENST00000560492 RDH8Q9NYR8 311 aa7.9□□□□□ -1.14
CDC42BPB-207ENST00000560492 KLK5Q9Y337 293 aaPredicted RBP7.9□□□□□ -1.14
CDC42BPB-207ENST00000560492 LOC102724200A0A096LPH7 203 aaPredicted RBP7.89□□□□□ -1.15
CDC42BPB-207ENST00000560492 ZNF320A2RRD8 509 aa7.89□□□□□ -1.15
CDC42BPB-207ENST00000560492 A6NHS1 94 aa7.89□□□□□ -1.15
CDC42BPB-207ENST00000560492 C2orf70A6NJV1 201 aa7.89□□□□□ -1.15
CDC42BPB-207ENST00000560492 PROP1O75360 226 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms