RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 DUS4LO95620 317 aaKnown RBP10.97□□□□□ -0.65
HMBOX1-213ENST00000560269 CDS2O95674 445 aa10.97□□□□□ -0.65
HMBOX1-213ENST00000560269 RPA2P15927 270 aa10.97□□□□□ -0.65
HMBOX1-213ENST00000560269 BRS3P32247 399 aa10.97□□□□□ -0.65
HMBOX1-213ENST00000560269 SRP14P37108 136 aaKnown RBP10.97□□□□□ -0.65
HMBOX1-213ENST00000560269 RAB13P51153 203 aa10.97□□□□□ -0.65
HMBOX1-213ENST00000560269 EBI3Q14213 229 aa10.97□□□□□ -0.65
HMBOX1-213ENST00000560269 SLC9A3R2Q15599 337 aa10.97□□□□□ -0.65
HMBOX1-213ENST00000560269 TATDN3Q17R31 274 aa10.97□□□□□ -0.65
HMBOX1-213ENST00000560269 RTL8BQ17RB0 113 aa10.97□□□□□ -0.65
HMBOX1-213ENST00000560269 DEFB112Q30KQ8 113 aa10.97□□□□□ -0.65
HMBOX1-213ENST00000560269 OR2B11Q5JQS5 317 aa10.97□□□□□ -0.65
HMBOX1-213ENST00000560269 LIAT1Q6ZQX7 453 aa10.97□□□□□ -0.65
HMBOX1-213ENST00000560269 THNSL2Q86YJ6 484 aa10.97□□□□□ -0.65
HMBOX1-213ENST00000560269 OR52B4Q8NGK2 314 aa10.97□□□□□ -0.65
HMBOX1-213ENST00000560269 OR4S2Q8NH73 311 aa10.97□□□□□ -0.65
HMBOX1-213ENST00000560269 ZNF431Q8TF32 576 aaPredicted RBP10.97□□□□□ -0.65
HMBOX1-213ENST00000560269 IGHV3-72A0A0B4J1Y9 119 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 A0A0B4J2A0 478 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 H7C2Y5 167 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 RAMP3O60896 148 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 VENTXO95231 258 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 HPRT1P00492 218 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 SERPINE2P07093 398 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 LPAR6P43657 344 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 SRPXP78539 464 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 ANKRD55Q3KP44 614 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 TMEM177Q53S58 311 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 LRTM2Q8N967 370 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 CASTOR1Q8WTX7 329 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 MITD1Q8WV92 249 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 IL22RA2Q969J5 263 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 TMEM56Q96MV1 263 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 PLEKHA2Q9HB19 425 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 SHPKQ9UHJ6 478 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 CDC42EP3Q9UKI2 254 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 ALG5Q9Y673 324 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 TMEM56-RWDD3S4R434 201 aa10.96□□□□□ -0.65
HMBOX1-213ENST00000560269 A0A0A6YYJ9 748 aa10.95□□□□□ -0.66
HMBOX1-213ENST00000560269 MDFIC2A0A1B0GVS7 189 aa10.95□□□□□ -0.66
HMBOX1-213ENST00000560269 CREBL2O60519 120 aaPredicted RBP10.95□□□□□ -0.66
HMBOX1-213ENST00000560269 CRYZL1O95825 349 aa10.95□□□□□ -0.66
HMBOX1-213ENST00000560269 IGKV1-39P01597 117 aa10.95□□□□□ -0.66
HMBOX1-213ENST00000560269 IGKV1-16P04430 117 aa10.95□□□□□ -0.66
HMBOX1-213ENST00000560269 IGKV1D-39P04432 117 aa10.95□□□□□ -0.66
HMBOX1-213ENST00000560269 CBX3Q13185 183 aa10.95□□□□□ -0.66
HMBOX1-213ENST00000560269 LRRC75BQ2VPJ9 315 aa10.95□□□□□ -0.66
HMBOX1-213ENST00000560269 OR4C13Q8NGP0 309 aa10.95□□□□□ -0.66
HMBOX1-213ENST00000560269 LHFPL5Q8TAF8 219 aa10.95□□□□□ -0.66
HMBOX1-213ENST00000560269 OSR1Q8TAX0 266 aaPredicted RBP10.95□□□□□ -0.66
HMBOX1-213ENST00000560269 PIFOQ8TCI5 191 aa10.95□□□□□ -0.66
HMBOX1-213ENST00000560269 C22orf15Q8WYQ4 148 aa10.95□□□□□ -0.66
HMBOX1-213ENST00000560269 FLYWCH2Q96CP2 140 aaKnown RBP10.95□□□□□ -0.66
HMBOX1-213ENST00000560269 ZNF48Q96MX3 618 aaPredicted RBP10.95□□□□□ -0.66
HMBOX1-213ENST00000560269 RNF5Q99942 180 aa10.95□□□□□ -0.66
HMBOX1-213ENST00000560269 COMMD9Q9P000 198 aa10.95□□□□□ -0.66
HMBOX1-213ENST00000560269 NAV3Q8IVL0 2385 aa10.94□□□□□ -0.66
HMBOX1-213ENST00000560269 S1PR2O95136 353 aa10.94□□□□□ -0.66
HMBOX1-213ENST00000560269 IGKV1D-33P01593 117 aa10.94□□□□□ -0.66
HMBOX1-213ENST00000560269 IGKV1-33P01594 117 aa10.94□□□□□ -0.66
HMBOX1-213ENST00000560269 SNRNP70P08621 437 aaKnown RBP10.94□□□□□ -0.66
HMBOX1-213ENST00000560269 FAM106CPP0CH98 169 aa10.94□□□□□ -0.66
HMBOX1-213ENST00000560269 SCGB2A2Q13296 93 aa10.94□□□□□ -0.66
HMBOX1-213ENST00000560269 Q6YL49 198 aa10.94□□□□□ -0.66
HMBOX1-213ENST00000560269 SELENOHQ8IZQ5 122 aaKnown RBP10.94□□□□□ -0.66
HMBOX1-213ENST00000560269 LGI3Q8N145 548 aa10.94□□□□□ -0.66
HMBOX1-213ENST00000560269 C12orf45Q8N5I9 185 aaPredicted RBP10.94□□□□□ -0.66
HMBOX1-213ENST00000560269 Q8N6K4 173 aa10.94□□□□□ -0.66
HMBOX1-213ENST00000560269 OR2T10Q8NGZ9 312 aa10.94□□□□□ -0.66
HMBOX1-213ENST00000560269 COQ8AQ8NI60 647 aa10.94□□□□□ -0.66
HMBOX1-213ENST00000560269 RBPMSQ93062 196 aaKnown RBP10.94□□□□□ -0.66
HMBOX1-213ENST00000560269 RBMXL1Q96E39 390 aaKnown RBP10.94□□□□□ -0.66
HMBOX1-213ENST00000560269 EAF1Q96JC9 268 aaPredicted RBP10.94□□□□□ -0.66
HMBOX1-213ENST00000560269 PHB2Q99623 299 aa10.94□□□□□ -0.66
HMBOX1-213ENST00000560269 SSX3Q99909 188 aa10.94□□□□□ -0.66
HMBOX1-213ENST00000560269 PRR13Q9NZ81 148 aa10.94□□□□□ -0.66
HMBOX1-213ENST00000560269 MAST4O15021 2626 aa10.93□□□□□ -0.66
HMBOX1-213ENST00000560269 HIVEP2P31629 2446 aa10.93□□□□□ -0.66
HMBOX1-213ENST00000560269 PIGBOS1A0A0B4J2F0 54 aa10.93□□□□□ -0.66
HMBOX1-213ENST00000560269 DUXBA0A1W2PPF3 345 aa10.93□□□□□ -0.66
HMBOX1-213ENST00000560269 DBX1A6NMT0 343 aa10.93□□□□□ -0.66
HMBOX1-213ENST00000560269 MOSP00540 346 aa10.93□□□□□ -0.66
HMBOX1-213ENST00000560269 HRASP01112 189 aa10.93□□□□□ -0.66
HMBOX1-213ENST00000560269 NQO2P16083 231 aa10.93□□□□□ -0.66
HMBOX1-213ENST00000560269 CD24P25063 80 aa10.93□□□□□ -0.66
HMBOX1-213ENST00000560269 LGALS7P47929 136 aa10.93□□□□□ -0.66
HMBOX1-213ENST00000560269 POU2AF1Q16633 256 aa10.93□□□□□ -0.66
HMBOX1-213ENST00000560269 TMEM268Q5VZI3 342 aa10.93□□□□□ -0.66
HMBOX1-213ENST00000560269 ZNF695Q8IW36 515 aa10.93□□□□□ -0.66
HMBOX1-213ENST00000560269 SEC22AQ96IW7 307 aa10.93□□□□□ -0.66
HMBOX1-213ENST00000560269 RITA1Q96K30 269 aa10.93□□□□□ -0.66
HMBOX1-213ENST00000560269 HARBI1Q96MB7 349 aa10.93□□□□□ -0.66
HMBOX1-213ENST00000560269 OR51J1Q9H342 316 aa10.93□□□□□ -0.66
HMBOX1-213ENST00000560269 SONP18583 2426 aaKnown RBP10.93□□□□□ -0.66
HMBOX1-213ENST00000560269 NSD1Q96L73 2696 aaPredicted RBP10.92□□□□□ -0.66
HMBOX1-213ENST00000560269 SRRM4A7MD48 611 aaKnown RBP10.92□□□□□ -0.66
HMBOX1-213ENST00000560269 INAFM1C9JVW0 142 aa10.92□□□□□ -0.66
HMBOX1-213ENST00000560269 H3BUX3 64 aa10.92□□□□□ -0.66
HMBOX1-213ENST00000560269 SHOXO15266 292 aa10.92□□□□□ -0.66
HMBOX1-213ENST00000560269 ATG12O94817 140 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms