RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 GNPNAT1Q96EK6 184 aaPredicted RBP14.66□□□□□ -0.06
SNX1-208ENST00000559844 IDI2-AS1Q9NZ38 188 aa14.66□□□□□ -0.06
SNX1-208ENST00000559844 PPIAL4AQ9Y536 164 aa14.66□□□□□ -0.06
SNX1-208ENST00000559844 ARID1AO14497 2285 aa14.66□□□□□ -0.06
SNX1-208ENST00000559844 hADV38S2A0JD32 116 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 LINC00473A8K010 186 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 TMEM178BH3BS89 294 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 KIR2DS2P43631 304 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 H2BFWTQ7Z2G1 175 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 NARS2Q96I59 477 aaKnown RBP14.65□□□□□ -0.06
SNX1-208ENST00000559844 IFI27L2Q9H2X8 130 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 LINC00574Q9H8X3 128 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 HSPB7Q9UBY9 170 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 CACFD1Q9UGQ2 172 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 TRIM77I1YAP6 450 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 OVOL3O00110 214 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 M6PRP20645 277 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 CAMLGP49069 296 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 UBE2KP61086 200 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 MIDNQ504T8 468 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 TGIF2LYQ8IUE0 185 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 TMEM217Q8N7C4 229 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 LYPD6BQ8NI32 183 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 ABHD14AQ9BUJ0 271 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 RAB1BQ9H0U4 201 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 DCAF16Q9NXF7 216 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 DYSFO75923 2080 aa14.65□□□□□ -0.06
SNX1-208ENST00000559844 TMEM218A2RU14 115 aa14.64□□□□□ -0.07
SNX1-208ENST00000559844 UMAD1C9J7I0 102 aa14.64□□□□□ -0.07
SNX1-208ENST00000559844 M0R1X1 148 aa14.64□□□□□ -0.07
SNX1-208ENST00000559844 TMPRSS2O15393 492 aa14.64□□□□□ -0.07
SNX1-208ENST00000559844 RBFOX2O43251 390 aaKnown RBP eCLIP14.64□□□□□ -0.07
SNX1-208ENST00000559844 HPRT1P00492 218 aa14.64□□□□□ -0.07
SNX1-208ENST00000559844 IAPPP10997 89 aa14.64□□□□□ -0.07
SNX1-208ENST00000559844 ATP6V0CP27449 155 aa14.64□□□□□ -0.07
SNX1-208ENST00000559844 ARHGDIBP52566 201 aa14.64□□□□□ -0.07
SNX1-208ENST00000559844 MEF2CQ06413 473 aaPredicted RBP14.64□□□□□ -0.07
SNX1-208ENST00000559844 TNFRSF9Q07011 255 aa14.64□□□□□ -0.07
SNX1-208ENST00000559844 COMMD1Q8N668 190 aa14.64□□□□□ -0.07
SNX1-208ENST00000559844 TSNAXQ99598 290 aaKnown RBP14.64□□□□□ -0.07
SNX1-208ENST00000559844 SH3BGRL3Q9H299 93 aa14.64□□□□□ -0.07
SNX1-208ENST00000559844 TMEM106BQ9NUM4 274 aa14.64□□□□□ -0.07
SNX1-208ENST00000559844 PRELID3BQ9Y3B1 194 aa14.64□□□□□ -0.07
SNX1-208ENST00000559844 ITPR2Q14571 2701 aa14.64□□□□□ -0.07
SNX1-208ENST00000559844 ASH1LQ9NR48 2969 aaKnown RBP14.64□□□□□ -0.07
SNX1-208ENST00000559844 IFNA5P01569 189 aa14.64□□□□□ -0.07
SNX1-208ENST00000559844 PRH1P02810 166 aa14.64□□□□□ -0.07
SNX1-208ENST00000559844 NCR3LG1Q68D85 454 aa14.64□□□□□ -0.07
SNX1-208ENST00000559844 TCF23Q7RTU1 214 aa14.64□□□□□ -0.07
SNX1-208ENST00000559844 OR10A7Q8NGE5 316 aa14.64□□□□□ -0.07
SNX1-208ENST00000559844 SLC25A10Q9UBX3 287 aaPredicted RBP14.64□□□□□ -0.07
SNX1-208ENST00000559844 LINC00312Q9Y6C7 94 aa14.64□□□□□ -0.07
SNX1-208ENST00000559844 FAM90A9PA6NNJ1 464 aa14.63□□□□□ -0.07
SNX1-208ENST00000559844 H3BP45 60 aa14.63□□□□□ -0.07
SNX1-208ENST00000559844 SCO1O75880 301 aa14.63□□□□□ -0.07
SNX1-208ENST00000559844 ZNF134P52741 427 aa14.63□□□□□ -0.07
SNX1-208ENST00000559844 HBG1P69891 147 aa14.63□□□□□ -0.07
SNX1-208ENST00000559844 HBG2P69892 147 aa14.63□□□□□ -0.07
SNX1-208ENST00000559844 TMEM267Q0VDI3 215 aaPredicted RBP14.63□□□□□ -0.07
SNX1-208ENST00000559844 TMEM182Q6ZP80 229 aaPredicted RBP14.63□□□□□ -0.07
SNX1-208ENST00000559844 OR2G3Q8NGZ4 309 aa14.63□□□□□ -0.07
SNX1-208ENST00000559844 R3HDM4Q96D70 268 aa14.63□□□□□ -0.07
SNX1-208ENST00000559844 GAL3ST2Q9H3Q3 398 aa14.63□□□□□ -0.07
SNX1-208ENST00000559844 RBKSQ9H477 322 aa14.63□□□□□ -0.07
SNX1-208ENST00000559844 C19orf12Q9NSK7 152 aa14.63□□□□□ -0.07
SNX1-208ENST00000559844 TANC2Q9HCD6 1990 aa14.63□□□□□ -0.07
SNX1-208ENST00000559844 CSMD2Q7Z408 3487 aa14.63□□□□□ -0.07
SNX1-208ENST00000559844 FCGR3BO75015 233 aa14.62□□□□□ -0.07
SNX1-208ENST00000559844 PROP1O75360 226 aa14.62□□□□□ -0.07
SNX1-208ENST00000559844 APOC3P02656 99 aa14.62□□□□□ -0.07
SNX1-208ENST00000559844 NDUFB7P17568 137 aa14.62□□□□□ -0.07
SNX1-208ENST00000559844 S1PR3Q99500 378 aa14.62□□□□□ -0.07
SNX1-208ENST00000559844 TREM1Q9NP99 234 aa14.62□□□□□ -0.07
SNX1-208ENST00000559844 FLNBO75369 2602 aaKnown RBP14.62□□□□□ -0.07
SNX1-208ENST00000559844 MARCH11A6NNE9 402 aa14.62□□□□□ -0.07
SNX1-208ENST00000559844 NDUFS7O75251 213 aa14.62□□□□□ -0.07
SNX1-208ENST00000559844 TSPAN15O95858 294 aa14.62□□□□□ -0.07
SNX1-208ENST00000559844 CT45A1Q5HYN5 189 aa14.62□□□□□ -0.07
SNX1-208ENST00000559844 CT45A3Q8NHU0 189 aa14.62□□□□□ -0.07
SNX1-208ENST00000559844 CCL17Q92583 94 aa14.62□□□□□ -0.07
SNX1-208ENST00000559844 ADTRPQ96IZ2 230 aa14.62□□□□□ -0.07
SNX1-208ENST00000559844 CIB3Q96Q77 187 aaPredicted RBP14.62□□□□□ -0.07
SNX1-208ENST00000559844 SLC31A2O15432 143 aa14.61□□□□□ -0.07
SNX1-208ENST00000559844 LY6HO94772 140 aa14.61□□□□□ -0.07
SNX1-208ENST00000559844 LY86O95711 162 aa14.61□□□□□ -0.07
SNX1-208ENST00000559844 THBS3P49746 956 aa14.61□□□□□ -0.07
SNX1-208ENST00000559844 ZNF616Q08AN1 781 aa14.61□□□□□ -0.07
SNX1-208ENST00000559844 RPL39P5Q59GN2 51 aa14.61□□□□□ -0.07
SNX1-208ENST00000559844 ZNF439Q8NDP4 499 aa14.61□□□□□ -0.07
SNX1-208ENST00000559844 SUN5Q8TC36 379 aa14.61□□□□□ -0.07
SNX1-208ENST00000559844 NEU4Q8WWR8 484 aaPredicted RBP14.61□□□□□ -0.07
SNX1-208ENST00000559844 NAV2Q8IVL1 2488 aa14.61□□□□□ -0.07
SNX1-208ENST00000559844 NFYBP25208 207 aa14.6□□□□□ -0.07
SNX1-208ENST00000559844 ERVK-16P61578 105 aa14.6□□□□□ -0.07
SNX1-208ENST00000559844 SPANXN5Q5MJ07 72 aa14.6□□□□□ -0.07
SNX1-208ENST00000559844 SLC25A24Q6NUK1 477 aa14.6□□□□□ -0.07
SNX1-208ENST00000559844 RPUSD1Q9UJJ7 312 aaKnown RBP14.6□□□□□ -0.07
SNX1-208ENST00000559844 TNFRSF13BO14836 293 aaPredicted RBP14.6□□□□□ -0.07
SNX1-208ENST00000559844 NDUFB3O43676 98 aa14.6□□□□□ -0.07
SNX1-208ENST00000559844 METTL15P1P0C7V9 234 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms