RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 FCN1O00602 326 aa16.02■□□□□ 0.16
TSPAN3-207ENST00000559494 FCGR3BO75015 233 aa16.02■□□□□ 0.16
TSPAN3-207ENST00000559494 IGLV2-23P01705 113 aa16.02■□□□□ 0.16
TSPAN3-207ENST00000559494 ETV6P41212 452 aa16.02■□□□□ 0.16
TSPAN3-207ENST00000559494 ZNF79Q15937 498 aa16.02■□□□□ 0.16
TSPAN3-207ENST00000559494 RTL8BQ17RB0 113 aa16.02■□□□□ 0.16
TSPAN3-207ENST00000559494 AADACL3Q5VUY0 350 aa16.02■□□□□ 0.16
TSPAN3-207ENST00000559494 LIN54Q6MZP7 749 aa16.02■□□□□ 0.16
TSPAN3-207ENST00000559494 STEAP1BQ6NZ63 245 aa16.02■□□□□ 0.16
TSPAN3-207ENST00000559494 KCTD9Q7L273 389 aa16.02■□□□□ 0.16
TSPAN3-207ENST00000559494 NOL4LQ96MY1 436 aaPredicted RBP16.02■□□□□ 0.16
TSPAN3-207ENST00000559494 TSNAXQ99598 290 aaKnown RBP16.02■□□□□ 0.16
TSPAN3-207ENST00000559494 LINC00527Q9UJ94 153 aa16.02■□□□□ 0.16
TSPAN3-207ENST00000559494 PRELID3BQ9Y3B1 194 aa16.02■□□□□ 0.16
TSPAN3-207ENST00000559494 RAB3DO95716 219 aa16.01■□□□□ 0.15
TSPAN3-207ENST00000559494 CRYZL1O95825 349 aa16.01■□□□□ 0.15
TSPAN3-207ENST00000559494 IFNA6P05013 189 aa16.01■□□□□ 0.15
TSPAN3-207ENST00000559494 LGALS7P47929 136 aa16.01■□□□□ 0.15
TSPAN3-207ENST00000559494 PYDC2Q56P42 97 aa16.01■□□□□ 0.15
TSPAN3-207ENST00000559494 OR2B11Q5JQS5 317 aa16.01■□□□□ 0.15
TSPAN3-207ENST00000559494 HIST2H2BDQ6DRA6 164 aa16.01■□□□□ 0.15
TSPAN3-207ENST00000559494 CENPVQ7Z7K6 275 aaPredicted RBP16.01■□□□□ 0.15
TSPAN3-207ENST00000559494 TCTEX1D2Q8WW35 142 aa16.01■□□□□ 0.15
TSPAN3-207ENST00000559494 THAP7Q9BT49 309 aaPredicted RBP16.01■□□□□ 0.15
TSPAN3-207ENST00000559494 ANKRD20A5PA0PJZ0 165 aa16■□□□□ 0.15
TSPAN3-207ENST00000559494 SHOXO15266 292 aa16■□□□□ 0.15
TSPAN3-207ENST00000559494 HLA-DRB1P01911 266 aa16■□□□□ 0.15
TSPAN3-207ENST00000559494 CSF1P09603 554 aa16■□□□□ 0.15
TSPAN3-207ENST00000559494 ZNF735P0CB33 412 aa16■□□□□ 0.15
TSPAN3-207ENST00000559494 PTBP1P26599 531 aaKnown RBP eCLIP16■□□□□ 0.15
TSPAN3-207ENST00000559494 CBX3Q13185 183 aa16■□□□□ 0.15
TSPAN3-207ENST00000559494 C10orf99Q6UWK7 81 aa16■□□□□ 0.15
TSPAN3-207ENST00000559494 LHFPL1Q86WI0 220 aa16■□□□□ 0.15
TSPAN3-207ENST00000559494 ARRDC1Q8N5I2 433 aa16■□□□□ 0.15
TSPAN3-207ENST00000559494 C11orf44Q8N8P7 122 aa16■□□□□ 0.15
TSPAN3-207ENST00000559494 HARBI1Q96MB7 349 aa16■□□□□ 0.15
TSPAN3-207ENST00000559494 METTL1Q9UBP6 276 aaKnown RBP16■□□□□ 0.15
TSPAN3-207ENST00000559494 WNK1Q9H4A3 2382 aa15.99■□□□□ 0.15
TSPAN3-207ENST00000559494 IGHV7-81A0A0B4J1V7 117 aa15.99■□□□□ 0.15
TSPAN3-207ENST00000559494 SLC25A17O43808 307 aa15.99■□□□□ 0.15
TSPAN3-207ENST00000559494 PGLYRP1O75594 196 aaPredicted RBP15.99■□□□□ 0.15
TSPAN3-207ENST00000559494 SPDEFO95238 335 aa15.99■□□□□ 0.15
TSPAN3-207ENST00000559494 CRYGBP07316 175 aa15.99■□□□□ 0.15
TSPAN3-207ENST00000559494 UCP3P55916 312 aa15.99■□□□□ 0.15
TSPAN3-207ENST00000559494 FAAP20Q6NZ36 180 aa15.99■□□□□ 0.15
TSPAN3-207ENST00000559494 OR5AU1Q8NGC0 362 aa15.99■□□□□ 0.15
TSPAN3-207ENST00000559494 BORCS5Q969J3 196 aa15.99■□□□□ 0.15
TSPAN3-207ENST00000559494 CLCC1Q96S66 551 aa15.99■□□□□ 0.15
TSPAN3-207ENST00000559494 TPSG1Q9NRR2 321 aa15.99■□□□□ 0.15
TSPAN3-207ENST00000559494 PTTG2Q9NZH5 202 aa15.99■□□□□ 0.15
TSPAN3-207ENST00000559494 GPR31O00270 319 aa15.98■□□□□ 0.15
TSPAN3-207ENST00000559494 KCNAB3O43448 404 aa15.98■□□□□ 0.15
TSPAN3-207ENST00000559494 AKAIN1P0CW23 69 aa15.98■□□□□ 0.15
TSPAN3-207ENST00000559494 CD28P10747 220 aa15.98■□□□□ 0.15
TSPAN3-207ENST00000559494 PLGLAQ15195 96 aa15.98■□□□□ 0.15
TSPAN3-207ENST00000559494 SPANXN2Q5MJ10 180 aa15.98■□□□□ 0.15
TSPAN3-207ENST00000559494 LPCAT3Q6P1A2 487 aa15.98■□□□□ 0.15
TSPAN3-207ENST00000559494 FOXRED2Q8IWF2 684 aa15.98■□□□□ 0.15
TSPAN3-207ENST00000559494 Q8N402 240 aa15.98■□□□□ 0.15
TSPAN3-207ENST00000559494 STPG2Q8N412 459 aa15.98■□□□□ 0.15
TSPAN3-207ENST00000559494 OR4C16Q8NGL9 310 aa15.98■□□□□ 0.15
TSPAN3-207ENST00000559494 OSR1Q8TAX0 266 aaPredicted RBP15.98■□□□□ 0.15
TSPAN3-207ENST00000559494 RSRP1Q9BUV0 290 aa15.98■□□□□ 0.15
TSPAN3-207ENST00000559494 TRRAPQ9Y4A5 3859 aa15.98■□□□□ 0.15
TSPAN3-207ENST00000559494 AP4M1O00189 453 aa15.97■□□□□ 0.15
TSPAN3-207ENST00000559494 CX3CL1P78423 397 aa15.97■□□□□ 0.15
TSPAN3-207ENST00000559494 MEF2DQ14814 521 aa15.97■□□□□ 0.15
TSPAN3-207ENST00000559494 ZNF329Q86UD4 541 aa15.97■□□□□ 0.15
TSPAN3-207ENST00000559494 OR51H1Q8NH63 302 aa15.97■□□□□ 0.15
TSPAN3-207ENST00000559494 TERB2Q8NHR7 220 aa15.97■□□□□ 0.15
TSPAN3-207ENST00000559494 CHPT1Q8WUD6 406 aa15.97■□□□□ 0.15
TSPAN3-207ENST00000559494 TRIM63Q969Q1 353 aa15.97■□□□□ 0.15
TSPAN3-207ENST00000559494 SRRQ9GZT4 340 aa15.97■□□□□ 0.15
TSPAN3-207ENST00000559494 OR51J1Q9H342 316 aa15.97■□□□□ 0.15
TSPAN3-207ENST00000559494 RAMP3O60896 148 aa15.96■□□□□ 0.15
TSPAN3-207ENST00000559494 IGF1P05019 195 aa15.96■□□□□ 0.15
TSPAN3-207ENST00000559494 KIR2DS2P43631 304 aa15.96■□□□□ 0.15
TSPAN3-207ENST00000559494 PJVKQ0ZLH3 352 aa15.96■□□□□ 0.15
TSPAN3-207ENST00000559494 CATR1Q13166 79 aa15.96■□□□□ 0.15
TSPAN3-207ENST00000559494 MRGPRG-AS1Q2M3A8 158 aa15.96■□□□□ 0.15
TSPAN3-207ENST00000559494 PHLDA2Q53GA4 152 aa15.96■□□□□ 0.15
TSPAN3-207ENST00000559494 TCTEX1D4Q5JR98 221 aa15.96■□□□□ 0.15
TSPAN3-207ENST00000559494 CMTM1Q8IZ96 169 aa15.96■□□□□ 0.15
TSPAN3-207ENST00000559494 SPAG16Q8N0X2 631 aa15.96■□□□□ 0.15
TSPAN3-207ENST00000559494 OR4S2Q8NH73 311 aa15.96■□□□□ 0.15
TSPAN3-207ENST00000559494 MRGPRFQ96AM1 343 aa15.96■□□□□ 0.15
TSPAN3-207ENST00000559494 FBN3Q75N90 2809 aa15.96■□□□□ 0.15
TSPAN3-207ENST00000559494 PSMB11A5LHX3 300 aa15.95■□□□□ 0.14
TSPAN3-207ENST00000559494 FBXO24O75426 580 aa15.95■□□□□ 0.14
TSPAN3-207ENST00000559494 EGR2P11161 476 aaPredicted RBP15.95■□□□□ 0.14
TSPAN3-207ENST00000559494 UBE2KP61086 200 aa15.95■□□□□ 0.14
TSPAN3-207ENST00000559494 NDPQ00604 133 aa15.95■□□□□ 0.14
TSPAN3-207ENST00000559494 SCGB2B2Q4G0G5 96 aa15.95■□□□□ 0.14
TSPAN3-207ENST00000559494 ZNF562Q6V9R5 426 aa15.95■□□□□ 0.14
TSPAN3-207ENST00000559494 PPP1R27Q86WC6 154 aa15.95■□□□□ 0.14
TSPAN3-207ENST00000559494 SLC38A6Q8IZM9 456 aa15.95■□□□□ 0.14
TSPAN3-207ENST00000559494 TEX45Q8NA69 505 aa15.95■□□□□ 0.14
TSPAN3-207ENST00000559494 FBXO7Q9Y3I1 522 aa15.95■□□□□ 0.14
TSPAN3-207ENST00000559494 DISC1C4P0D8 188 aa15.94■□□□□ 0.14
TSPAN3-207ENST00000559494 ATP6V0E1O15342 81 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms