RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 LGALS7P47929 136 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 RAB9AP51151 201 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 TPPP2P59282 170 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 VBP1P61758 197 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 NCS1P62166 190 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 FXYD3Q14802 87 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 VMA21Q3ZAQ7 101 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 TMEM69Q5SWH9 247 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 ZNF562Q6V9R5 426 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 GVQW1Q8N7I0 195 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 RNF152Q8N8N0 203 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 OR11H1Q8NG94 326 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 SECTM1Q8WVN6 248 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 TCTEX1D2Q8WW35 142 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 ACOT12Q8WYK0 555 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 UBE2E2Q96LR5 201 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 MS4A10Q96PG2 267 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 PHB2Q99623 299 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 GNB4Q9HAV0 340 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 MRPS7Q9Y2R9 242 aaKnown RBP6.39□□□□□ -1.39
SNX1-207ENST00000559401 PRELID3BQ9Y3B1 194 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 IGKV1D-13A0A0B4J2D9 117 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 MPPED1O15442 326 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 SOX15O60248 233 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 SLC22A5O76082 557 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 IGHV3-11P01762 117 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 HLA-DQB1P01920 261 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 IGKV1-13P0DP09 117 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 AADACP22760 399 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 FCGR2CP31995 323 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 CRIP2P52943 208 aaPredicted RBP6.38□□□□□ -1.39
SNX1-207ENST00000559401 TAS2R20P59543 309 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 FXYD4P59646 89 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 ZNF616Q08AN1 781 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 PJVKQ0ZLH3 352 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 TNXAQ16473 311 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 TMEM177Q53S58 311 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 PYHIN1Q6K0P9 492 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 IDO2Q6ZQW0 420 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 HOGA1Q86XE5 327 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 ZNF491Q8N8L2 437 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 MINDY2Q8NBR6 621 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 OR1N2Q8NGR9 330 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 OSR1Q8TAX0 266 aaPredicted RBP6.38□□□□□ -1.39
SNX1-207ENST00000559401 TAS2R8Q9NYW2 309 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 COMMD3Q9UBI1 195 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 RBMX2Q9Y388 322 aaKnown RBP6.38□□□□□ -1.39
SNX1-207ENST00000559401 NUBP2Q9Y5Y2 271 aa6.38□□□□□ -1.39
SNX1-207ENST00000559401 SMIM31A0A1B0GVY4 71 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 TRIM64CA6NLI5 447 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 SEC14L6B5MCN3 397 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 ARPC1BO15143 372 aaKnown RBP6.37□□□□□ -1.39
SNX1-207ENST00000559401 TNFSF12O43508 249 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 XRCC3O43542 346 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 CREBL2O60519 120 aaPredicted RBP6.37□□□□□ -1.39
SNX1-207ENST00000559401 ACTL6BO94805 426 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 IGLV2-23P01705 113 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 TRGV3P03979 118 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 EIF4EP06730 217 aaKnown RBP6.37□□□□□ -1.39
SNX1-207ENST00000559401 OR8U8P0C7N1 319 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 APELAP0DMC3 54 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 EGR2P11161 476 aaPredicted RBP6.37□□□□□ -1.39
SNX1-207ENST00000559401 HERV-K104P61576 105 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 RPL30P62888 115 aaKnown RBP6.37□□□□□ -1.39
SNX1-207ENST00000559401 CDK10Q15131 360 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 AKIRIN2Q53H80 203 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 DEFB121Q5J5C9 76 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 C9orf66Q5T8R8 295 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 TMEM17Q86X19 198 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 OR5T1Q8NG75 326 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 OR13F1Q8NGS4 319 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 OR4S2Q8NH73 311 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 MYOZ3Q8TDC0 251 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 DDB2Q92466 427 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 SLC25A46Q96AG3 418 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 KCTD12Q96CX2 325 aaKnown RBP6.37□□□□□ -1.39
SNX1-207ENST00000559401 GPHA2Q96T91 129 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 HSD17B10Q99714 261 aaKnown RBP6.37□□□□□ -1.39
SNX1-207ENST00000559401 SLC5A7Q9GZV3 580 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 ALX4Q9H161 411 aaPredicted RBP6.37□□□□□ -1.39
SNX1-207ENST00000559401 SLA2Q9H6Q3 261 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 CCL28Q9NRJ3 127 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 COA4Q9NYJ1 87 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 EHFQ9NZC4 300 aa6.37□□□□□ -1.39
SNX1-207ENST00000559401 CMYA5Q8N3K9 4069 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 C13orf42A0A1B0GVH6 325 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 SRRM4A7MD48 611 aaKnown RBP6.36□□□□□ -1.39
SNX1-207ENST00000559401 FAM25AB3EWG3 89 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 FAM25CB3EWG5 89 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 FAM25GB3EWG6 89 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 I3L521 148 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 PPYP01298 95 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 LGALS1P09382 135 aaKnown RBP6.36□□□□□ -1.39
SNX1-207ENST00000559401 SAA1P0DJI8 122 aaPredicted RBP6.36□□□□□ -1.39
SNX1-207ENST00000559401 SMIM18P0DKX4 95 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 PRSS3P35030 304 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 SLURP1P55000 103 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 KRTAP10-11P60412 298 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 UBE2KP61086 200 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 DGCR2P98153 550 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms