RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 BRWD1-AS2P59051 145 aa13.46□□□□□ -0.26
TPM1-219ENST00000559397 Q3ZCU0 254 aa13.46□□□□□ -0.26
TPM1-219ENST00000559397 ACOT7LQ6ZUV0 252 aa13.46□□□□□ -0.26
TPM1-219ENST00000559397 KCNRGQ8N5I3 272 aa13.46□□□□□ -0.26
TPM1-219ENST00000559397 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.46□□□□□ -0.26
TPM1-219ENST00000559397 LSM10Q969L4 123 aaKnown RBP13.46□□□□□ -0.26
TPM1-219ENST00000559397 SIRT7Q9NRC8 400 aa13.46□□□□□ -0.26
TPM1-219ENST00000559397 OR5AC2Q9NZP5 309 aa13.46□□□□□ -0.26
TPM1-219ENST00000559397 AUP1Q9Y679 476 aa13.46□□□□□ -0.26
TPM1-219ENST00000559397 MBPP02686 304 aaPredicted RBP13.45□□□□□ -0.26
TPM1-219ENST00000559397 NFYBP25208 207 aa13.45□□□□□ -0.26
TPM1-219ENST00000559397 PRB3Q04118 309 aaPredicted RBP13.45□□□□□ -0.26
TPM1-219ENST00000559397 HCP5Q6MZN7 132 aa13.45□□□□□ -0.26
TPM1-219ENST00000559397 C1orf229Q6ZS94 237 aaPredicted RBP13.45□□□□□ -0.26
TPM1-219ENST00000559397 OR1S1Q8NH92 325 aa13.45□□□□□ -0.26
TPM1-219ENST00000559397 LEAP2Q969E1 77 aa13.45□□□□□ -0.26
TPM1-219ENST00000559397 PCGF1Q9BSM1 259 aa13.45□□□□□ -0.26
TPM1-219ENST00000559397 ZFP57Q9NU63 452 aa13.45□□□□□ -0.26
TPM1-219ENST00000559397 A0A087X0M5 115 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 A0A1B0GX30 115 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 LINC00473A8K010 186 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 DEDDO75618 318 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 LY6G6DO95868 133 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 DUTP33316 252 aaKnown RBP13.44□□□□□ -0.26
TPM1-219ENST00000559397 SLC25A48Q6ZT89 311 aaKnown RBP13.44□□□□□ -0.26
TPM1-219ENST00000559397 ODF3L1Q8IXM7 274 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 DCUN1D4Q92564 292 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 RRNAD1Q96FB5 475 aaKnown RBP13.44□□□□□ -0.26
TPM1-219ENST00000559397 ARL6Q9H0F7 186 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 TMEM133Q9H2Q1 129 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 PAIP2BQ9ULR5 123 aaKnown RBP13.44□□□□□ -0.26
TPM1-219ENST00000559397 A0A0G2JRQ6 117 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 K7EPK0 472 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 TSC22D2O75157 780 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 IGKV1-5P01602 117 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 IGHV3-7P01780 117 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 LPAR6P43657 344 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 S100A10P60903 97 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 FAM219AQ8IW50 185 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 FAM71E2Q8N5Q1 922 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 INO80EQ8NBZ0 244 aaPredicted RBP13.44□□□□□ -0.26
TPM1-219ENST00000559397 TCTEX1D2Q8WW35 142 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 GPR146Q96CH1 333 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 ZNF251Q9BRH9 671 aa13.44□□□□□ -0.26
TPM1-219ENST00000559397 A0A1B0GU03 582 aa13.43□□□□□ -0.26
TPM1-219ENST00000559397 RNASEK-C17orf49H0YIS7 233 aa13.43□□□□□ -0.26
TPM1-219ENST00000559397 RAMP3O60896 148 aa13.43□□□□□ -0.26
TPM1-219ENST00000559397 PITX3O75364 302 aa13.43□□□□□ -0.26
TPM1-219ENST00000559397 HOXB4P17483 251 aaPredicted RBP13.43□□□□□ -0.26
TPM1-219ENST00000559397 KLRD1Q13241 179 aa13.43□□□□□ -0.26
TPM1-219ENST00000559397 NCR3LG1Q68D85 454 aa13.43□□□□□ -0.26
TPM1-219ENST00000559397 SPAG16Q8N0X2 631 aa13.43□□□□□ -0.26
TPM1-219ENST00000559397 C8orf31Q8N9H6 132 aa13.43□□□□□ -0.26
TPM1-219ENST00000559397 ZNF596Q8TC21 504 aa13.43□□□□□ -0.26
TPM1-219ENST00000559397 AQP10Q96PS8 301 aa13.43□□□□□ -0.26
TPM1-219ENST00000559397 POMT1Q9Y6A1 747 aa13.43□□□□□ -0.26
TPM1-219ENST00000559397 TLN2Q9Y4G6 2542 aa13.42□□□□□ -0.26
TPM1-219ENST00000559397 A0A1W2PPE3 182 aa13.42□□□□□ -0.26
TPM1-219ENST00000559397 M0R1X1 148 aa13.42□□□□□ -0.26
TPM1-219ENST00000559397 RAB29O14966 203 aa13.42□□□□□ -0.26
TPM1-219ENST00000559397 ST8SIA3O43173 380 aa13.42□□□□□ -0.26
TPM1-219ENST00000559397 RLN2P04090 185 aa13.42□□□□□ -0.26
TPM1-219ENST00000559397 P0C879 139 aa13.42□□□□□ -0.26
TPM1-219ENST00000559397 ID3Q02535 119 aa13.42□□□□□ -0.26
TPM1-219ENST00000559397 SMCO1Q147U7 214 aa13.42□□□□□ -0.26
TPM1-219ENST00000559397 RPL39P5Q59GN2 51 aa13.42□□□□□ -0.26
TPM1-219ENST00000559397 THOC7Q6I9Y2 204 aaKnown RBP13.42□□□□□ -0.26
TPM1-219ENST00000559397 TEX261Q6UWH6 196 aa13.42□□□□□ -0.26
TPM1-219ENST00000559397 ZNF767PQ75MW2 155 aa13.42□□□□□ -0.26
TPM1-219ENST00000559397 CD300LFQ8TDQ1 290 aa13.42□□□□□ -0.26
TPM1-219ENST00000559397 LHX4Q969G2 390 aa13.42□□□□□ -0.26
TPM1-219ENST00000559397 C11orf1Q9H5F2 150 aa13.42□□□□□ -0.26
TPM1-219ENST00000559397 YAE1D1Q9NRH1 226 aa13.42□□□□□ -0.26
TPM1-219ENST00000559397 U3KQ87 197 aa13.42□□□□□ -0.26
TPM1-219ENST00000559397 MAST4O15021 2626 aa13.42□□□□□ -0.26
TPM1-219ENST00000559397 SAA2-SAA4A0A096LPE2 208 aa13.41□□□□□ -0.26
TPM1-219ENST00000559397 IGHV2-26A0A0B4J1V2 119 aa13.41□□□□□ -0.26
TPM1-219ENST00000559397 CENPVL3A0A0U1RRI6 287 aa13.41□□□□□ -0.26
TPM1-219ENST00000559397 SAA2P0DJI9 122 aaPredicted RBP13.41□□□□□ -0.26
TPM1-219ENST00000559397 AP2S1P53680 142 aaPredicted RBP13.41□□□□□ -0.26
TPM1-219ENST00000559397 LINC00205P59089 165 aa13.41□□□□□ -0.26
TPM1-219ENST00000559397 KLF17Q5JT82 389 aaPredicted RBP13.41□□□□□ -0.26
TPM1-219ENST00000559397 Q6ZRM9 215 aa13.41□□□□□ -0.26
TPM1-219ENST00000559397 LINC00311Q8N616 119 aa13.41□□□□□ -0.26
TPM1-219ENST00000559397 OR13D1Q8NGV5 346 aa13.41□□□□□ -0.26
TPM1-219ENST00000559397 DDB2Q92466 427 aa13.41□□□□□ -0.26
TPM1-219ENST00000559397 LSM5Q9Y4Y9 91 aaKnown RBP13.41□□□□□ -0.26
TPM1-219ENST00000559397 MSGN1A6NI15 193 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 E5RGE8 158 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 RBFOX2O43251 390 aaKnown RBP eCLIP13.4□□□□□ -0.26
TPM1-219ENST00000559397 KCNAB3O43448 404 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 SCGB1D2O95969 90 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 COX7A1P24310 79 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 NKX2-1P43699 371 aaPredicted RBP13.4□□□□□ -0.26
TPM1-219ENST00000559397 GNG10P50151 68 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 CLEC9AQ6UXN8 241 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 FOXRED2Q8IWF2 684 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 ABHD12Q8N2K0 398 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 PNKDQ8N490 385 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 ZNF680Q8NEM1 530 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms