RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 NPBQ8NG41 125 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 WIPF2Q8TF74 440 aaPredicted RBP8.62□□□□□ -1.03
TPM1-217ENST00000559108 TCTEX1D2Q8WW35 142 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 TMEM158Q8WZ71 300 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 NPFFR1Q9GZQ6 430 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 FBXL15Q9H469 300 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 C5orf66Q9H5L9 145 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 PITPNC1Q9UKF7 332 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 VSIG4Q9Y279 399 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 FBXO7Q9Y3I1 522 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 NBR2O15453 112 aa8.61□□□□□ -1.03
TPM1-217ENST00000559108 FCGR3BO75015 233 aa8.61□□□□□ -1.03
TPM1-217ENST00000559108 CRYZL1O95825 349 aa8.61□□□□□ -1.03
TPM1-217ENST00000559108 COMPP49747 757 aaPredicted RBP8.61□□□□□ -1.03
TPM1-217ENST00000559108 RPL15P61313 204 aaKnown RBP8.61□□□□□ -1.03
TPM1-217ENST00000559108 MEF2DQ14814 521 aa8.61□□□□□ -1.03
TPM1-217ENST00000559108 ZNF585BQ52M93 769 aa8.61□□□□□ -1.03
TPM1-217ENST00000559108 ZNF66Q6ZN08 573 aa8.61□□□□□ -1.03
TPM1-217ENST00000559108 IDO2Q6ZQW0 420 aa8.61□□□□□ -1.03
TPM1-217ENST00000559108 C16orf82Q7Z2V1 217 aa8.61□□□□□ -1.03
TPM1-217ENST00000559108 PDPNQ86YL7 162 aa8.61□□□□□ -1.03
TPM1-217ENST00000559108 ADAD2Q8NCV1 583 aaKnown RBP8.61□□□□□ -1.03
TPM1-217ENST00000559108 OR4C13Q8NGP0 309 aa8.61□□□□□ -1.03
TPM1-217ENST00000559108 OR51H1Q8NH63 302 aa8.61□□□□□ -1.03
TPM1-217ENST00000559108 TERB2Q8NHR7 220 aa8.61□□□□□ -1.03
TPM1-217ENST00000559108 TMEM230Q96A57 120 aa8.61□□□□□ -1.03
TPM1-217ENST00000559108 HSD17B10Q99714 261 aaKnown RBP8.61□□□□□ -1.03
TPM1-217ENST00000559108 RTBDNQ9BSG5 229 aaPredicted RBP8.61□□□□□ -1.03
TPM1-217ENST00000559108 RANBP3Q9H6Z4 567 aaPredicted RBP8.61□□□□□ -1.03
TPM1-217ENST00000559108 SLC2A9Q9NRM0 540 aa8.61□□□□□ -1.03
TPM1-217ENST00000559108 SLC2A8Q9NY64 477 aa8.61□□□□□ -1.03
TPM1-217ENST00000559108 LINC00527Q9UJ94 153 aa8.61□□□□□ -1.03
TPM1-217ENST00000559108 IGHV7-81A0A0B4J1V7 117 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 NCBP2LA6PVI3 153 aaKnown RBP8.6□□□□□ -1.03
TPM1-217ENST00000559108 GPR31O00270 319 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 RRHO14718 337 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 ARPC1BO15143 372 aaKnown RBP8.6□□□□□ -1.03
TPM1-217ENST00000559108 FGF16O43320 207 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 SLC25A17O43808 307 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 S1PR2O95136 353 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 IGKV1-39P01597 117 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 APOA2P02652 100 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 IGKV1D-39P04432 117 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 IFNA6P05013 189 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 MC5RP33032 325 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 CCR6P51684 374 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 C5orf64Q2M2E5 130 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 TBC1D26Q86UD7 250 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 TOMM5Q8N4H5 51 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 ZBTB34Q8NCN2 500 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 WFDC12Q8WWY7 111 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 AKR1E2Q96JD6 320 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 NOL4LQ96MY1 436 aaPredicted RBP8.6□□□□□ -1.03
TPM1-217ENST00000559108 WNT10AQ9GZT5 417 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 LIN7CQ9NUP9 197 aaKnown RBP8.6□□□□□ -1.03
TPM1-217ENST00000559108 MCUBQ9NWR8 336 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 PRR13Q9NZ81 148 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 TBC1D24Q9ULP9 559 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 GPR132Q9UNW8 380 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 MMP24Q9Y5R2 645 aa8.6□□□□□ -1.03
TPM1-217ENST00000559108 TRAV3A0A0B4J244 114 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 A0A1B0GW64 132 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 CLPSL1A2RUU4 121 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 DISC1C4P0D8 188 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 SLC22A5O76082 557 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 IGHG2P01859 326 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 CRYBA1P05813 215 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 EGR2P11161 476 aaPredicted RBP8.59□□□□□ -1.03
TPM1-217ENST00000559108 MYOD1P15172 320 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 PGAM2P15259 253 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 RPA2P15927 270 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 PIGPP57054 158 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 RPS16P62249 146 aaKnown RBP8.59□□□□□ -1.03
TPM1-217ENST00000559108 TAGLNQ01995 201 aaKnown RBP8.59□□□□□ -1.03
TPM1-217ENST00000559108 C9orf152Q5JTZ5 239 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 TRIQKQ629K1 86 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 ZNF57Q68EA5 555 aaPredicted RBP8.59□□□□□ -1.03
TPM1-217ENST00000559108 SLC38A6Q8IZM9 456 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 SPAG16Q8N0X2 631 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 OR4F5Q8NH21 305 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 FLYWCH2Q96CP2 140 aaKnown RBP8.59□□□□□ -1.03
TPM1-217ENST00000559108 ADTRPQ96IZ2 230 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 HARBI1Q96MB7 349 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 TP53RKQ96S44 253 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 RAB18Q9NP72 206 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 METTL1Q9UBP6 276 aaKnown RBP8.59□□□□□ -1.03
TPM1-217ENST00000559108 RNF114Q9Y508 228 aa8.59□□□□□ -1.03
TPM1-217ENST00000559108 SHOXO15266 292 aa8.58□□□□□ -1.04
TPM1-217ENST00000559108 CA2P00918 260 aa8.58□□□□□ -1.04
TPM1-217ENST00000559108 HLA-DRB1P01911 266 aa8.58□□□□□ -1.04
TPM1-217ENST00000559108 CTSDP07339 412 aaPredicted RBP8.58□□□□□ -1.04
TPM1-217ENST00000559108 SAA1P0DJI8 122 aaPredicted RBP8.58□□□□□ -1.04
TPM1-217ENST00000559108 F2RP25116 425 aa8.58□□□□□ -1.04
TPM1-217ENST00000559108 RND3P61587 244 aa8.58□□□□□ -1.04
TPM1-217ENST00000559108 SUPT4H1P63272 117 aaKnown RBP8.58□□□□□ -1.04
TPM1-217ENST00000559108 RTL8BQ17RB0 113 aa8.58□□□□□ -1.04
TPM1-217ENST00000559108 SP6Q3SY56 376 aa8.58□□□□□ -1.04
TPM1-217ENST00000559108 C19orf54Q5BKX5 351 aa8.58□□□□□ -1.04
TPM1-217ENST00000559108 TCTEX1D4Q5JR98 221 aa8.58□□□□□ -1.04
TPM1-217ENST00000559108 C10orf55Q5SWW7 151 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms