RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 SRRQ9GZT4 340 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 TAS2R8Q9NYW2 309 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 LINC00527Q9UJ94 153 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 RBM7Q9Y580 266 aaKnown RBP9.01□□□□□ -0.97
SNX1-204ENST00000559061 TNCP24821 2201 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 H7C2Y5 167 aa9□□□□□ -0.97
SNX1-204ENST00000559061 ARPC1BO15143 372 aaKnown RBP9□□□□□ -0.97
SNX1-204ENST00000559061 RAMP3O60896 148 aa9□□□□□ -0.97
SNX1-204ENST00000559061 RBBP9O75884 186 aa9□□□□□ -0.97
SNX1-204ENST00000559061 HLA-DRB1P01911 266 aa9□□□□□ -0.97
SNX1-204ENST00000559061 CD28P10747 220 aa9□□□□□ -0.97
SNX1-204ENST00000559061 SSBP1Q04837 148 aaKnown RBP9□□□□□ -0.97
SNX1-204ENST00000559061 PJVKQ0ZLH3 352 aa9□□□□□ -0.97
SNX1-204ENST00000559061 KLF9Q13886 244 aaPredicted RBP9□□□□□ -0.97
SNX1-204ENST00000559061 C9orf152Q5JTZ5 239 aa9□□□□□ -0.97
SNX1-204ENST00000559061 KCTD9Q7L273 389 aa9□□□□□ -0.97
SNX1-204ENST00000559061 C11orf44Q8N8P7 122 aa9□□□□□ -0.97
SNX1-204ENST00000559061 OR4C16Q8NGL9 310 aa9□□□□□ -0.97
SNX1-204ENST00000559061 RSRP1Q9BUV0 290 aa9□□□□□ -0.97
SNX1-204ENST00000559061 VWFP04275 2813 aa8.99□□□□□ -0.97
SNX1-204ENST00000559061 TET2Q6N021 2002 aaPredicted RBP8.99□□□□□ -0.97
SNX1-204ENST00000559061 SLC25A17O43808 307 aa8.99□□□□□ -0.97
SNX1-204ENST00000559061 FCGR3BO75015 233 aa8.99□□□□□ -0.97
SNX1-204ENST00000559061 PGLYRP1O75594 196 aaPredicted RBP8.99□□□□□ -0.97
SNX1-204ENST00000559061 CRYZL1O95825 349 aa8.99□□□□□ -0.97
SNX1-204ENST00000559061 APOA2P02652 100 aa8.99□□□□□ -0.97
SNX1-204ENST00000559061 TAS2R19P59542 299 aa8.99□□□□□ -0.97
SNX1-204ENST00000559061 BAK1Q16611 211 aa8.99□□□□□ -0.97
SNX1-204ENST00000559061 ACTBL2Q562R1 376 aa8.99□□□□□ -0.97
SNX1-204ENST00000559061 RNASE10Q5GAN6 216 aaKnown RBP8.99□□□□□ -0.97
SNX1-204ENST00000559061 STEAP1BQ6NZ63 245 aa8.99□□□□□ -0.97
SNX1-204ENST00000559061 ZNF66Q6ZN08 573 aa8.99□□□□□ -0.97
SNX1-204ENST00000559061 OR13C8Q8NGS7 320 aa8.99□□□□□ -0.97
SNX1-204ENST00000559061 OR6F1Q8NGZ6 308 aa8.99□□□□□ -0.97
SNX1-204ENST00000559061 C15orf40Q8WUR7 153 aa8.99□□□□□ -0.97
SNX1-204ENST00000559061 FLYWCH2Q96CP2 140 aaKnown RBP8.99□□□□□ -0.97
SNX1-204ENST00000559061 ADTRPQ96IZ2 230 aa8.99□□□□□ -0.97
SNX1-204ENST00000559061 HARBI1Q96MB7 349 aa8.99□□□□□ -0.97
SNX1-204ENST00000559061 HSD17B10Q99714 261 aaKnown RBP8.99□□□□□ -0.97
SNX1-204ENST00000559061 RNF5Q99942 180 aa8.99□□□□□ -0.97
SNX1-204ENST00000559061 AKIP1Q9NQ31 210 aa8.99□□□□□ -0.97
SNX1-204ENST00000559061 RABL2AQ9UBK7 228 aaPredicted RBP8.99□□□□□ -0.97
SNX1-204ENST00000559061 RABL2BQ9UNT1 228 aa8.99□□□□□ -0.97
SNX1-204ENST00000559061 ATP6V0E1O15342 81 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 SLC22A5O76082 557 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 SPDEFO95238 335 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 RAB3DO95716 219 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 IGF1P05019 195 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 PI3P19957 117 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 TBPP20226 339 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 CRIP2P52943 208 aaPredicted RBP8.98□□□□□ -0.97
SNX1-204ENST00000559061 UCP3P55916 312 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 HERV-K104P61576 105 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 ZNF585BQ52M93 769 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 SHISA2Q6UWI4 295 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 IDO2Q6ZQW0 420 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 SLC35E3Q7Z769 313 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 ZNF329Q86UD4 541 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 VKORC1L1Q8N0U8 176 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 STPG2Q8N412 459 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 ARRDC1Q8N5I2 433 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 ZBTB34Q8NCN2 500 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 TCTEX1D2Q8WW35 142 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 RASL11BQ9BPW5 248 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 THAP7Q9BT49 309 aaPredicted RBP8.98□□□□□ -0.97
SNX1-204ENST00000559061 METTL1Q9UBP6 276 aaKnown RBP8.98□□□□□ -0.97
SNX1-204ENST00000559061 ZNF580Q9UK33 172 aa8.98□□□□□ -0.97
SNX1-204ENST00000559061 A0A1B0GW64 132 aa8.97□□□□□ -0.97
SNX1-204ENST00000559061 G3V318 75 aa8.97□□□□□ -0.97
SNX1-204ENST00000559061 SOX15O60248 233 aa8.97□□□□□ -0.97
SNX1-204ENST00000559061 CA2P00918 260 aa8.97□□□□□ -0.97
SNX1-204ENST00000559061 RLN1P04808 185 aa8.97□□□□□ -0.97
SNX1-204ENST00000559061 IL6RP08887 468 aaPredicted RBP8.97□□□□□ -0.97
SNX1-204ENST00000559061 CSF1P09603 554 aa8.97□□□□□ -0.97
SNX1-204ENST00000559061 SAA1P0DJI8 122 aaPredicted RBP8.97□□□□□ -0.97
SNX1-204ENST00000559061 PTBP1P26599 531 aaKnown RBP eCLIP8.97□□□□□ -0.97
SNX1-204ENST00000559061 S100A5P33763 92 aa8.97□□□□□ -0.97
SNX1-204ENST00000559061 PPP5CP53041 499 aa8.97□□□□□ -0.97
SNX1-204ENST00000559061 RPS16P62249 146 aaKnown RBP8.97□□□□□ -0.97
SNX1-204ENST00000559061 CX3CL1P78423 397 aa8.97□□□□□ -0.97
SNX1-204ENST00000559061 PHLDA2Q53GA4 152 aa8.97□□□□□ -0.97
SNX1-204ENST00000559061 PYDC2Q56P42 97 aa8.97□□□□□ -0.97
SNX1-204ENST00000559061 ASPHD1Q5U4P2 390 aa8.97□□□□□ -0.97
SNX1-204ENST00000559061 PUSL1Q8N0Z8 303 aaKnown RBP8.97□□□□□ -0.97
SNX1-204ENST00000559061 Q8N402 240 aa8.97□□□□□ -0.97
SNX1-204ENST00000559061 OR51H1Q8NH63 302 aa8.97□□□□□ -0.97
SNX1-204ENST00000559061 CITED2Q99967 270 aaPredicted RBP8.97□□□□□ -0.97
SNX1-204ENST00000559061 OR51J1Q9H342 316 aa8.97□□□□□ -0.97
SNX1-204ENST00000559061 GPR31O00270 319 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 SHOXO15266 292 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 S1PR2O95136 353 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 TSPAN15O95858 294 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 IGKV1-39P01597 117 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 IGKV1D-39P04432 117 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 AKAIN1P0CW23 69 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 RRASP10301 218 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 MYOD1P15172 320 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 PPIFP30405 207 aaKnown RBP8.96□□□□□ -0.98
SNX1-204ENST00000559061 UBE2KP61086 200 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 TSPAN5P62079 268 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms