RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 GGCTO75223 188 aaKnown RBP8.61□□□□□ -1.03
SMAD3-206ENST00000558739 TUSC2O75896 110 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 OR2J3O76001 311 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 AMBPP02760 352 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 OR9G9P0C7N8 305 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 P0DMU3 169 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 FAM231AP0DMU4 169 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 FAM231CP0DMU5 169 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 RAB3AP20336 220 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 MC5RP33032 325 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 ETV1P50549 477 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 CCDC58Q4VC31 144 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 LAIR2Q6ISS4 152 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 RBPMS2Q6ZRY4 209 aaKnown RBP8.61□□□□□ -1.03
SMAD3-206ENST00000558739 ZNF767PQ75MW2 155 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 LINC00596Q86U02 117 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 Q8NAQ8 132 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 ZNF485Q8NCK3 441 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 SETD9Q8NE22 299 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 OR5D14Q8NGL3 314 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 CD300LFQ8TDQ1 290 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 IL1F10Q8WWZ1 152 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 PHB2Q99623 299 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 RAB9BQ9NP90 201 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 DIMT1Q9UNQ2 313 aaKnown RBP8.61□□□□□ -1.03
SMAD3-206ENST00000558739 RNF213Q63HN8 5207 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 IRGMA1A4Y4 181 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 EPM2AB3EWF7 344 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 MCRIP1C9JLW8 97 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 CAPGP40121 348 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 GBX2P52951 348 aaPredicted RBP8.6□□□□□ -1.03
SMAD3-206ENST00000558739 HTD2P86397 168 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 C1orf134Q5TEV5 83 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 XAF1Q6GPH4 301 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 SIGIRRQ6IA17 410 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 TRAT1Q6PIZ9 186 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 OR4A5Q8NH83 315 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 OR5AK2Q8NH90 309 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 CYGBQ8WWM9 190 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 GGHQ92820 318 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 ORAI1Q96D31 301 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 RNF5Q99942 180 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 PDCD1LG2Q9BQ51 273 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 AGMATQ9BSE5 352 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 RNF126Q9BV68 326 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 METTL9Q9H1A3 318 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 PLCXD1Q9NUJ7 323 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 PIPOXQ9P0Z9 390 aa8.6□□□□□ -1.03
SMAD3-206ENST00000558739 TRAV10A0A0B4J240 114 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 FAM90A7PA6NKC0 464 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 MPTX1A8MV57 137 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 SHOXO15266 292 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 OGG1O15527 345 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 SC5DO75845 299 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 GNAO1P09471 354 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 SOX2P48431 317 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 GTF2A1P52655 376 aaPredicted RBP8.59□□□□□ -1.03
SMAD3-206ENST00000558739 MED22Q15528 200 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 ZNF585BQ52M93 769 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 C10orf55Q5SWW7 151 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 OR2G6Q5TZ20 316 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 RPL22L1Q6P5R6 122 aaKnown RBP8.59□□□□□ -1.03
SMAD3-206ENST00000558739 CLEC19AQ6UXS0 136 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 TMPRSS11AQ6ZMR5 421 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 IDO2Q6ZQW0 420 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 GPHB5Q86YW7 130 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 GALNT14Q96FL9 552 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 TMEM80Q96HE8 168 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 TMEM68Q96MH6 324 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 CSTL1Q9H114 145 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 HRH4Q9H3N8 390 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 BABAM2Q9NXR7 383 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 CELA1Q9UNI1 258 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 EXOSC1Q9Y3B2 195 aaKnown RBP8.59□□□□□ -1.03
SMAD3-206ENST00000558739 PEX16Q9Y5Y5 336 aa8.59□□□□□ -1.03
SMAD3-206ENST00000558739 TRAV25A0A0B4J276 109 aa8.58□□□□□ -1.04
SMAD3-206ENST00000558739 IGHV4-28A0A0C4DH34 117 aa8.58□□□□□ -1.04
SMAD3-206ENST00000558739 IGHV3-35A0A0C4DH35 117 aa8.58□□□□□ -1.04
SMAD3-206ENST00000558739 SRRM4A7MD48 611 aaKnown RBP8.58□□□□□ -1.04
SMAD3-206ENST00000558739 MPPED1O15442 326 aa8.58□□□□□ -1.04
SMAD3-206ENST00000558739 LALBAP00709 142 aa8.58□□□□□ -1.04
SMAD3-206ENST00000558739 ARL3P36405 182 aa8.58□□□□□ -1.04
SMAD3-206ENST00000558739 LY6G6FQ5SQ64 297 aa8.58□□□□□ -1.04
SMAD3-206ENST00000558739 DDI2Q5TDH0 399 aa8.58□□□□□ -1.04
SMAD3-206ENST00000558739 SLC38A6Q8IZM9 456 aa8.58□□□□□ -1.04
SMAD3-206ENST00000558739 C8orf59Q8N0T1 100 aaPredicted RBP8.58□□□□□ -1.04
SMAD3-206ENST00000558739 NECAP1Q8NC96 275 aa8.58□□□□□ -1.04
SMAD3-206ENST00000558739 GALMQ96C23 342 aa8.58□□□□□ -1.04
SMAD3-206ENST00000558739 SPAG8Q99932 426 aaPredicted RBP8.58□□□□□ -1.04
SMAD3-206ENST00000558739 SULT4A1Q9BR01 284 aa8.58□□□□□ -1.04
SMAD3-206ENST00000558739 FKBP14Q9NWM8 211 aa8.58□□□□□ -1.04
SMAD3-206ENST00000558739 KCNIP1Q9NZI2 227 aa8.58□□□□□ -1.04
SMAD3-206ENST00000558739 OR1A1Q9P1Q5 309 aa8.58□□□□□ -1.04
SMAD3-206ENST00000558739 CLEC2DQ9UHP7 191 aa8.58□□□□□ -1.04
SMAD3-206ENST00000558739 EFCAB10A6NFE3 127 aa8.57□□□□□ -1.04
SMAD3-206ENST00000558739 CA1P00915 261 aaPredicted RBP8.57□□□□□ -1.04
SMAD3-206ENST00000558739 CD74P04233 296 aa8.57□□□□□ -1.04
SMAD3-206ENST00000558739 C8orf88P0DMB2 117 aa8.57□□□□□ -1.04
SMAD3-206ENST00000558739 GTF2F2P13984 249 aa8.57□□□□□ -1.04
SMAD3-206ENST00000558739 TAGLNQ01995 201 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms