RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 ADTRPQ96IZ2 230 aa12.02□□□□□ -0.49
CSHL1-208ENST00000558609 OR5B12Q96R08 314 aa12.02□□□□□ -0.49
CSHL1-208ENST00000558609 FAM103A1Q9BTL3 118 aaKnown RBP12.02□□□□□ -0.49
CSHL1-208ENST00000558609 TPSG1Q9NRR2 321 aa12.02□□□□□ -0.49
CSHL1-208ENST00000558609 ETV7Q9Y603 341 aa12.02□□□□□ -0.49
CSHL1-208ENST00000558609 SEC14L6B5MCN3 397 aa12.01□□□□□ -0.49
CSHL1-208ENST00000558609 ARPC1BO15143 372 aaKnown RBP12.01□□□□□ -0.49
CSHL1-208ENST00000558609 SSX5O60225 188 aa12.01□□□□□ -0.49
CSHL1-208ENST00000558609 TMEM127O75204 238 aa12.01□□□□□ -0.49
CSHL1-208ENST00000558609 DUTP33316 252 aaKnown RBP12.01□□□□□ -0.49
CSHL1-208ENST00000558609 LUMP51884 338 aaPredicted RBP12.01□□□□□ -0.49
CSHL1-208ENST00000558609 GNG2P59768 71 aa12.01□□□□□ -0.49
CSHL1-208ENST00000558609 FXYD3Q14802 87 aa12.01□□□□□ -0.49
CSHL1-208ENST00000558609 RTL8BQ17RB0 113 aa12.01□□□□□ -0.49
CSHL1-208ENST00000558609 CNIH2Q6PI25 160 aa12.01□□□□□ -0.49
CSHL1-208ENST00000558609 BVESQ8NE79 360 aa12.01□□□□□ -0.49
CSHL1-208ENST00000558609 OR5H6Q8NGV6 325 aa12.01□□□□□ -0.49
CSHL1-208ENST00000558609 DDB2Q92466 427 aa12.01□□□□□ -0.49
CSHL1-208ENST00000558609 HARBI1Q96MB7 349 aa12.01□□□□□ -0.49
CSHL1-208ENST00000558609 OR2W1Q9Y3N9 320 aa12.01□□□□□ -0.49
CSHL1-208ENST00000558609 A0A0A6YYH2 397 aa12□□□□□ -0.49
CSHL1-208ENST00000558609 A6NJ64 397 aa12□□□□□ -0.49
CSHL1-208ENST00000558609 SRRM4A7MD48 611 aaKnown RBP12□□□□□ -0.49
CSHL1-208ENST00000558609 SHOXO15266 292 aa12□□□□□ -0.49
CSHL1-208ENST00000558609 HLA-DQB1P01920 261 aa12□□□□□ -0.49
CSHL1-208ENST00000558609 CD40LGP29965 261 aa12□□□□□ -0.49
CSHL1-208ENST00000558609 SSBP2P81877 361 aaPredicted RBP12□□□□□ -0.49
CSHL1-208ENST00000558609 IDNKQ5T6J7 187 aa12□□□□□ -0.49
CSHL1-208ENST00000558609 GPR107Q5VW38 600 aa12□□□□□ -0.49
CSHL1-208ENST00000558609 CASTOR1Q8WTX7 329 aa12□□□□□ -0.49
CSHL1-208ENST00000558609 SLC25A38Q96DW6 304 aa12□□□□□ -0.49
CSHL1-208ENST00000558609 SLA2Q9H6Q3 261 aa12□□□□□ -0.49
CSHL1-208ENST00000558609 ANXA10Q9UJ72 324 aa12□□□□□ -0.49
CSHL1-208ENST00000558609 LINC00473A8K010 186 aa11.99□□□□□ -0.49
CSHL1-208ENST00000558609 SLC22A5O76082 557 aa11.99□□□□□ -0.49
CSHL1-208ENST00000558609 CNIH1O95406 144 aa11.99□□□□□ -0.49
CSHL1-208ENST00000558609 LGALS1P09382 135 aaKnown RBP11.99□□□□□ -0.49
CSHL1-208ENST00000558609 NFYAP23511 347 aaPredicted RBP11.99□□□□□ -0.49
CSHL1-208ENST00000558609 INSL3P51460 131 aa11.99□□□□□ -0.49
CSHL1-208ENST00000558609 PJVKQ0ZLH3 352 aa11.99□□□□□ -0.49
CSHL1-208ENST00000558609 DCTN2Q13561 401 aaKnown RBP11.99□□□□□ -0.49
CSHL1-208ENST00000558609 TIMM50Q3ZCQ8 353 aa11.99□□□□□ -0.49
CSHL1-208ENST00000558609 ZNF645Q8N7E2 425 aa11.99□□□□□ -0.49
CSHL1-208ENST00000558609 TEX45Q8NA69 505 aa11.99□□□□□ -0.49
CSHL1-208ENST00000558609 OR13F1Q8NGS4 319 aa11.99□□□□□ -0.49
CSHL1-208ENST00000558609 GRPEL2Q8TAA5 225 aa11.99□□□□□ -0.49
CSHL1-208ENST00000558609 DGCR14Q96DF8 476 aaKnown RBP11.99□□□□□ -0.49
CSHL1-208ENST00000558609 RHOVQ96L33 236 aa11.99□□□□□ -0.49
CSHL1-208ENST00000558609 TMEM68Q96MH6 324 aa11.99□□□□□ -0.49
CSHL1-208ENST00000558609 ALX4Q9H161 411 aaPredicted RBP11.99□□□□□ -0.49
CSHL1-208ENST00000558609 TRAV18A0A075B6X5 111 aa11.98□□□□□ -0.49
CSHL1-208ENST00000558609 LINC01619G3V211 115 aa11.98□□□□□ -0.49
CSHL1-208ENST00000558609 H3BUA1 57 aa11.98□□□□□ -0.49
CSHL1-208ENST00000558609 UBE2KP61086 200 aa11.98□□□□□ -0.49
CSHL1-208ENST00000558609 MRGPRG-AS1Q2M3A8 158 aa11.98□□□□□ -0.49
CSHL1-208ENST00000558609 OSR1Q8TAX0 266 aaPredicted RBP11.98□□□□□ -0.49
CSHL1-208ENST00000558609 DCUN1D4Q92564 292 aa11.98□□□□□ -0.49
CSHL1-208ENST00000558609 MS4A10Q96PG2 267 aa11.98□□□□□ -0.49
CSHL1-208ENST00000558609 SPATA2Q9UM82 520 aa11.98□□□□□ -0.49
CSHL1-208ENST00000558609 RBMX2Q9Y388 322 aaKnown RBP11.98□□□□□ -0.49
CSHL1-208ENST00000558609 TNCP24821 2201 aa11.97□□□□□ -0.49
CSHL1-208ENST00000558609 J3QRK9 145 aa11.97□□□□□ -0.49
CSHL1-208ENST00000558609 TUSC2O75896 110 aa11.97□□□□□ -0.49
CSHL1-208ENST00000558609 CRYZL1O95825 349 aa11.97□□□□□ -0.49
CSHL1-208ENST00000558609 IGLV2-14P01704 120 aa11.97□□□□□ -0.49
CSHL1-208ENST00000558609 TRGV3P03979 118 aa11.97□□□□□ -0.49
CSHL1-208ENST00000558609 TPPP2P59282 170 aa11.97□□□□□ -0.49
CSHL1-208ENST00000558609 VMA21Q3ZAQ7 101 aa11.97□□□□□ -0.49
CSHL1-208ENST00000558609 CROCCP3Q8IVE0 287 aa11.97□□□□□ -0.49
CSHL1-208ENST00000558609 POC5Q8NA72 575 aa11.97□□□□□ -0.49
CSHL1-208ENST00000558609 YIPF6Q96EC8 236 aa11.97□□□□□ -0.49
CSHL1-208ENST00000558609 DIABLOQ9NR28 239 aa11.97□□□□□ -0.49
CSHL1-208ENST00000558609 RSL24D1Q9UHA3 163 aaKnown RBP11.97□□□□□ -0.49
CSHL1-208ENST00000558609 CEPT1Q9Y6K0 416 aa11.97□□□□□ -0.49
CSHL1-208ENST00000558609 COL7A1Q02388 2944 aa11.97□□□□□ -0.49
CSHL1-208ENST00000558609 IGHV4OR15-8A0A075B7B6 117 aa11.96□□□□□ -0.49
CSHL1-208ENST00000558609 A0A087WW49 117 aa11.96□□□□□ -0.49
CSHL1-208ENST00000558609 IGKV1D-13A0A0B4J2D9 117 aa11.96□□□□□ -0.49
CSHL1-208ENST00000558609 OVOL1O14753 267 aa11.96□□□□□ -0.49
CSHL1-208ENST00000558609 AIREO43918 545 aa11.96□□□□□ -0.49
CSHL1-208ENST00000558609 BRI3O95415 125 aa11.96□□□□□ -0.49
CSHL1-208ENST00000558609 IGHV3-11P01762 117 aa11.96□□□□□ -0.49
CSHL1-208ENST00000558609 HSPB1P04792 205 aaKnown RBP11.96□□□□□ -0.49
CSHL1-208ENST00000558609 IGKV1-13P0DP09 117 aa11.96□□□□□ -0.49
CSHL1-208ENST00000558609 ECI1P42126 302 aa11.96□□□□□ -0.49
CSHL1-208ENST00000558609 OVCH2Q7RTZ1 564 aa11.96□□□□□ -0.49
CSHL1-208ENST00000558609 ZNF429Q86V71 674 aa11.96□□□□□ -0.49
CSHL1-208ENST00000558609 HOGA1Q86XE5 327 aa11.96□□□□□ -0.49
CSHL1-208ENST00000558609 BEST4Q8NFU0 473 aa11.96□□□□□ -0.49
CSHL1-208ENST00000558609 OR5T1Q8NG75 326 aa11.96□□□□□ -0.49
CSHL1-208ENST00000558609 DLX4Q92988 240 aaPredicted RBP11.96□□□□□ -0.49
CSHL1-208ENST00000558609 FUNDC2Q9BWH2 189 aa11.96□□□□□ -0.49
CSHL1-208ENST00000558609 AUNIPQ9H7T9 357 aa11.96□□□□□ -0.49
CSHL1-208ENST00000558609 PRELID3BQ9Y3B1 194 aa11.96□□□□□ -0.49
CSHL1-208ENST00000558609 FCGR3BO75015 233 aa11.95□□□□□ -0.5
CSHL1-208ENST00000558609 TGFBR1P36897 503 aa11.95□□□□□ -0.5
CSHL1-208ENST00000558609 RPS19P39019 145 aaKnown RBP11.95□□□□□ -0.5
CSHL1-208ENST00000558609 SLURP1P55000 103 aa11.95□□□□□ -0.5
CSHL1-208ENST00000558609 TMBIM6P55061 237 aa11.95□□□□□ -0.5
CSHL1-208ENST00000558609 RPL30P62888 115 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms