RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 PYHIN1Q6K0P9 492 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 C10orf99Q6UWK7 81 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 ZNF66Q6ZN08 573 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 OVCH2Q7RTZ1 564 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 PPP1R27Q86WC6 154 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 ZNF695Q8IW36 515 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 TEX45Q8NA69 505 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 BVESQ8NE79 360 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 OR6F1Q8NGZ6 308 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 NAA50Q9GZZ1 169 aaKnown RBP6.66□□□□□ -1.34
TPM1-213ENST00000558400 RABL2AQ9UBK7 228 aaPredicted RBP6.66□□□□□ -1.34
TPM1-213ENST00000558400 ADAM30Q9UKF2 790 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 RABL2BQ9UNT1 228 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 RBMX2Q9Y388 322 aaKnown RBP6.66□□□□□ -1.34
TPM1-213ENST00000558400 NUBP2Q9Y5Y2 271 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 NUDT19A8MXV4 375 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 J3QRK9 145 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 FCN1O00602 326 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 HPGDSO60760 199 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 NOL3O60936 208 aaKnown RBP6.65□□□□□ -1.34
TPM1-213ENST00000558400 CNIH1O95406 144 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 PPYP01298 95 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 EIF4EP06730 217 aaKnown RBP6.65□□□□□ -1.34
TPM1-213ENST00000558400 ELK1P19419 428 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 CD33P20138 364 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 PSMB8P28062 276 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 KIR2DS2P43631 304 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 LINC00205P59089 165 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 CFHR3Q02985 330 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 DYRK1AQ13627 763 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 FXYD3Q14802 87 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 LPCAT3Q6P1A2 487 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 CLVS1Q8IUQ0 354 aaPredicted RBP6.65□□□□□ -1.34
TPM1-213ENST00000558400 MFSD4AQ8N468 514 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 MINDY2Q8NBR6 621 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 OR5M8Q8NGP6 311 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 OR5H2Q8NGV7 314 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 CD300LFQ8TDQ1 290 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 GPX8Q8TED1 209 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 DDB2Q92466 427 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 UBE2E2Q96LR5 201 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 HARBI1Q96MB7 349 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 DCUN1D5Q9BTE7 237 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 MCRIP2Q9BUT9 160 aaKnown RBP6.65□□□□□ -1.34
TPM1-213ENST00000558400 GPR61Q9BZJ8 451 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 PARP11Q9NR21 331 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 SCOCQ9UIL1 159 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 ANAPC10Q9UM13 185 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 WSB1Q9Y6I7 421 aa6.65□□□□□ -1.34
TPM1-213ENST00000558400 IGKV1D-13A0A0B4J2D9 117 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 LINC00473A8K010 186 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 G3V318 75 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 ATP6V0E1O15342 81 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 SLC25A17O43808 307 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 FCGR3BO75015 233 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 ACTL6BO94805 426 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 CRYZL1O95825 349 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 HRASP01112 189 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 IGLV1-40P01703 118 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 IGLV2-23P01705 113 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 RPLP1P05386 114 aaKnown RBP6.64□□□□□ -1.35
TPM1-213ENST00000558400 CRYGBP07316 175 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 IGKV1-13P0DP09 117 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 PTHLHP12272 177 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 AADACP22760 399 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 S100GP29377 79 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 RAB9AP51151 201 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 UBE2KP61086 200 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 HERV-K104P61576 105 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 TSPAN5P62079 268 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 CATR1Q13166 79 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 ACTBL2Q562R1 376 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 KCTD9Q7L273 389 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 POC5Q8NA72 575 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 KLHL30-AS1Q8NEE0 82 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 OR4S2Q8NH73 311 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 VSTM2AQ8TAG5 236 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 ABHD5Q8WTS1 349 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 SECTM1Q8WVN6 248 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 SNAPC3Q92966 411 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 RCC1LQ96I51 464 aaKnown RBP6.64□□□□□ -1.35
TPM1-213ENST00000558400 CLCC1Q96S66 551 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 SLC5A7Q9GZV3 580 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 SLA2Q9H6Q3 261 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 EHFQ9NZC4 300 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 ZMAT5Q9UDW3 170 aaKnown RBP6.64□□□□□ -1.35
TPM1-213ENST00000558400 FOXA2Q9Y261 457 aaPredicted RBP6.64□□□□□ -1.35
TPM1-213ENST00000558400 VSIG4Q9Y279 399 aa6.64□□□□□ -1.35
TPM1-213ENST00000558400 MEIS3P1A6NDR6 274 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 SRRM4A7MD48 611 aaKnown RBP6.63□□□□□ -1.35
TPM1-213ENST00000558400 H3BUA1 57 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 CCL24O00175 119 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 RGS5O15539 181 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 RBFOX2O43251 390 aaKnown RBP eCLIP6.63□□□□□ -1.35
TPM1-213ENST00000558400 CA2P00918 260 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 IGLV2-14P01704 120 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 VWFP04275 2813 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 RCVRNP35243 200 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 RFX2P48378 723 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 MRPS10P82664 201 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms