RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TMEM229AB2RXF0 380 aa12.02□□□□□ -0.49
SPG11-210ENST00000558319 GDF9O60383 454 aa12.02□□□□□ -0.49
SPG11-210ENST00000558319 PF4P02776 101 aa12.02□□□□□ -0.49
SPG11-210ENST00000558319 THY1P04216 161 aa12.02□□□□□ -0.49
SPG11-210ENST00000558319 CIRBPQ14011 172 aaKnown RBP12.02□□□□□ -0.49
SPG11-210ENST00000558319 EBLN2Q6P2I7 272 aa12.02□□□□□ -0.49
SPG11-210ENST00000558319 UNQ5815/PRO19632Q6UWF5 114 aa12.02□□□□□ -0.49
SPG11-210ENST00000558319 BHLHA9Q7RTU4 235 aa12.02□□□□□ -0.49
SPG11-210ENST00000558319 MCM3APO60318 1980 aa12.02□□□□□ -0.49
SPG11-210ENST00000558319 IGLV3-16A0A075B6K0 115 aa12.02□□□□□ -0.49
SPG11-210ENST00000558319 COX14Q96I36 57 aa12.02□□□□□ -0.49
SPG11-210ENST00000558319 ZNF714Q96N38 554 aa12.02□□□□□ -0.49
SPG11-210ENST00000558319 HIST1H1AQ02539 215 aaPredicted RBP12.02□□□□□ -0.49
SPG11-210ENST00000558319 CHST5Q9GZS9 411 aa12.02□□□□□ -0.49
SPG11-210ENST00000558319 APOMO95445 188 aa12.01□□□□□ -0.49
SPG11-210ENST00000558319 TEX30Q5JUR7 227 aa12.01□□□□□ -0.49
SPG11-210ENST00000558319 ZNF324BQ6AW86 544 aaPredicted RBP12.01□□□□□ -0.49
SPG11-210ENST00000558319 C8orf82Q6P1X6 216 aaPredicted RBP12.01□□□□□ -0.49
SPG11-210ENST00000558319 CENPVQ7Z7K6 275 aaPredicted RBP12.01□□□□□ -0.49
SPG11-210ENST00000558319 SPCS1Q9Y6A9 102 aa12.01□□□□□ -0.49
SPG11-210ENST00000558319 IGKV3D-20A0A0C4DH25 116 aa12.01□□□□□ -0.49
SPG11-210ENST00000558319 GFRA3O60609 400 aa12.01□□□□□ -0.49
SPG11-210ENST00000558319 ATP5J2P56134 94 aa12.01□□□□□ -0.49
SPG11-210ENST00000558319 GPR146Q96CH1 333 aa12.01□□□□□ -0.49
SPG11-210ENST00000558319 A0A1W2PPC1 479 aa12.01□□□□□ -0.49
SPG11-210ENST00000558319 FAM19A2Q8N3H0 131 aa12.01□□□□□ -0.49
SPG11-210ENST00000558319 HPRT1P00492 218 aa12.01□□□□□ -0.49
SPG11-210ENST00000558319 TMEM170BQ5T4T1 132 aa12.01□□□□□ -0.49
SPG11-210ENST00000558319 SYT8Q8NBV8 401 aa12.01□□□□□ -0.49
SPG11-210ENST00000558319 PROB1E7EW31 1015 aa12.01□□□□□ -0.49
SPG11-210ENST00000558319 NPIPB6E9PJ23 425 aa12.01□□□□□ -0.49
SPG11-210ENST00000558319 J3QT63 122 aa12.01□□□□□ -0.49
SPG11-210ENST00000558319 BGLAPP02818 100 aa12.01□□□□□ -0.49
SPG11-210ENST00000558319 UNC119Q13432 240 aa12.01□□□□□ -0.49
SPG11-210ENST00000558319 MMD2Q8IY49 270 aa12.01□□□□□ -0.49
SPG11-210ENST00000558319 PMCHL2Q9BQD1 86 aa12.01□□□□□ -0.49
SPG11-210ENST00000558319 SELENOHQ8IZQ5 122 aaKnown RBP12□□□□□ -0.49
SPG11-210ENST00000558319 C10orf35Q96D05 121 aa12□□□□□ -0.49
SPG11-210ENST00000558319 SS18L1O75177 396 aaPredicted RBP12□□□□□ -0.49
SPG11-210ENST00000558319 STAG3L3P0CL85 134 aa12□□□□□ -0.49
SPG11-210ENST00000558319 LCN2P80188 198 aa12□□□□□ -0.49
SPG11-210ENST00000558319 ZNF721Q8TF20 911 aa12□□□□□ -0.49
SPG11-210ENST00000558319 TMEM70Q9BUB7 260 aa12□□□□□ -0.49
SPG11-210ENST00000558319 TRPM6Q9BX84 2022 aa12□□□□□ -0.49
SPG11-210ENST00000558319 SLC17A3O00476 420 aa12□□□□□ -0.49
SPG11-210ENST00000558319 SNAI3Q3KNW1 292 aa12□□□□□ -0.49
SPG11-210ENST00000558319 FBXW9Q5XUX1 488 aa12□□□□□ -0.49
SPG11-210ENST00000558319 DEFB104AQ8WTQ1 72 aa12□□□□□ -0.49
SPG11-210ENST00000558319 WFDC12Q8WWY7 111 aa12□□□□□ -0.49
SPG11-210ENST00000558319 GPR82Q96P67 336 aa12□□□□□ -0.49
SPG11-210ENST00000558319 ZG16O60844 167 aa12□□□□□ -0.49
SPG11-210ENST00000558319 OR4A5Q8NH83 315 aa12□□□□□ -0.49
SPG11-210ENST00000558319 DPH3P1Q9H4G8 78 aa12□□□□□ -0.49
SPG11-210ENST00000558319 PQLC2LA1A4F0 135 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 EPOPA6NHQ4 379 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 C9JCJ5 164 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 H0Y980 276 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 PSG4Q00888 419 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 OR5A1Q8NGJ0 315 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 WDR34Q96EX3 536 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 FAM206AQ9NX38 181 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 PGPEP1Q9NXJ5 209 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 C1RLQ9NZP8 487 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 TRAV12-3A0A0B4J271 114 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 A0A0J9YW62 118 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 FUT5Q11128 374 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 ASCL5Q7RTU5 278 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 ZNF645Q8N7E2 425 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 ZBTB34Q8NCN2 500 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 TMEM222Q9H0R3 208 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 ALX4Q9H161 411 aaPredicted RBP11.99□□□□□ -0.49
SPG11-210ENST00000558319 KNTC1P50748 2209 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 PRR19A6NJB7 356 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 PGLYRP1O75594 196 aaPredicted RBP11.99□□□□□ -0.49
SPG11-210ENST00000558319 UCP2P55851 309 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 WDR54Q9H977 334 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 PAPPAQ13219 1627 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 A0A1W2PPV9 198 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 A6NNC1 897 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 H3BUT2 72 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 FADS6Q8N9I5 356 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 ZNF414Q96IQ9 312 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 GEMIN7Q9H840 131 aaKnown RBP11.99□□□□□ -0.49
SPG11-210ENST00000558319 MPDU1O75352 247 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 NDUFA3O95167 84 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 ZNF56Q15929 161 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 SMRP1Q8NCR6 262 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 SCNM1Q9BWG6 230 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 MIA3Q5JRA6 1907 aa11.99□□□□□ -0.49
SPG11-210ENST00000558319 TRAV8-2A0A0B4J237 113 aa11.98□□□□□ -0.49
SPG11-210ENST00000558319 IGHV4-39P01824 125 aa11.98□□□□□ -0.49
SPG11-210ENST00000558319 CKS1BP61024 79 aa11.98□□□□□ -0.49
SPG11-210ENST00000558319 ISXQ2M1V0 245 aa11.98□□□□□ -0.49
SPG11-210ENST00000558319 FAM201AQ5SY85 155 aa11.98□□□□□ -0.49
SPG11-210ENST00000558319 MARVELD3Q96A59 401 aa11.98□□□□□ -0.49
SPG11-210ENST00000558319 MS4A5Q9H3V2 200 aa11.98□□□□□ -0.49
SPG11-210ENST00000558319 DOCK1Q14185 1865 aa11.98□□□□□ -0.49
SPG11-210ENST00000558319 MPTX1A8MV57 137 aa11.98□□□□□ -0.49
SPG11-210ENST00000558319 MEF2CQ06413 473 aaPredicted RBP11.98□□□□□ -0.49
SPG11-210ENST00000558319 SPSB2Q99619 263 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms