RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 RBMXL1Q96E39 390 aaKnown RBP7.85□□□□□ -1.15
USP3-207ENST00000558218 DUX3Q96PT4 197 aa7.85□□□□□ -1.15
USP3-207ENST00000558218 KRTAP4-12Q9BQ66 201 aa7.85□□□□□ -1.15
USP3-207ENST00000558218 OR2D2Q9H210 308 aa7.85□□□□□ -1.15
USP3-207ENST00000558218 SLC35D1Q9NTN3 355 aa7.85□□□□□ -1.15
USP3-207ENST00000558218 RBM7Q9Y580 266 aaKnown RBP7.85□□□□□ -1.15
USP3-207ENST00000558218 ETV7Q9Y603 341 aa7.85□□□□□ -1.15
USP3-207ENST00000558218 PRKDCP78527 4128 aaKnown RBP7.84□□□□□ -1.15
USP3-207ENST00000558218 A0A075B6Q4 140 aa7.84□□□□□ -1.15
USP3-207ENST00000558218 SEC14L6B5MCN3 397 aa7.84□□□□□ -1.15
USP3-207ENST00000558218 SOX15O60248 233 aa7.84□□□□□ -1.15
USP3-207ENST00000558218 CA2P00918 260 aa7.84□□□□□ -1.15
USP3-207ENST00000558218 RAB25P57735 213 aa7.84□□□□□ -1.15
USP3-207ENST00000558218 NDPQ00604 133 aa7.84□□□□□ -1.15
USP3-207ENST00000558218 FXYD3Q14802 87 aa7.84□□□□□ -1.15
USP3-207ENST00000558218 ECSCRQ19T08 205 aa7.84□□□□□ -1.15
USP3-207ENST00000558218 DEFB136Q30KP8 78 aa7.84□□□□□ -1.15
USP3-207ENST00000558218 SFXN4Q6P4A7 337 aa7.84□□□□□ -1.15
USP3-207ENST00000558218 CNIH2Q6PI25 160 aa7.84□□□□□ -1.15
USP3-207ENST00000558218 TEX45Q8NA69 505 aa7.84□□□□□ -1.15
USP3-207ENST00000558218 OSR1Q8TAX0 266 aaPredicted RBP7.84□□□□□ -1.15
USP3-207ENST00000558218 ARPC1AQ92747 370 aa7.84□□□□□ -1.15
USP3-207ENST00000558218 GNB4Q9HAV0 340 aa7.84□□□□□ -1.15
USP3-207ENST00000558218 ZNF230Q9UIE0 474 aaPredicted RBP7.84□□□□□ -1.15
USP3-207ENST00000558218 DAPK2Q9UIK4 370 aa7.84□□□□□ -1.15
USP3-207ENST00000558218 SCOCQ9UIL1 159 aa7.84□□□□□ -1.15
USP3-207ENST00000558218 RRP15Q9Y3B9 282 aaKnown RBP7.84□□□□□ -1.15
USP3-207ENST00000558218 FBXO7Q9Y3I1 522 aa7.84□□□□□ -1.15
USP3-207ENST00000558218 OR2W1Q9Y3N9 320 aa7.84□□□□□ -1.15
USP3-207ENST00000558218 A0A0B4J203 849 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 A0A0G2JLM5 398 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 LINC01619G3V211 115 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 SHOXO15266 292 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 SLC25A17O43808 307 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 CNIH1O95406 144 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 IGLV2-23P01705 113 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 HLA-DQB1P01920 261 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 HSPB1P04792 205 aaKnown RBP7.83□□□□□ -1.16
USP3-207ENST00000558218 LGALS1P09382 135 aaKnown RBP7.83□□□□□ -1.16
USP3-207ENST00000558218 NHLRC4P0CG21 123 aaPredicted RBP7.83□□□□□ -1.16
USP3-207ENST00000558218 DUTP33316 252 aaKnown RBP7.83□□□□□ -1.16
USP3-207ENST00000558218 SDC2P34741 201 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 LINC00205P59089 165 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 TIMM50Q3ZCQ8 353 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 ZNF260Q3ZCT1 412 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 WFDC3Q8IUB2 231 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 ZNF645Q8N7E2 425 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 LFNGQ8NES3 379 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 ABHD5Q8WTS1 349 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 DDB2Q92466 427 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 RHOVQ96L33 236 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 B9D2Q9BPU9 175 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 ST6GALNAC5Q9BVH7 336 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 OR51E2Q9H255 320 aa7.83□□□□□ -1.16
USP3-207ENST00000558218 SORL1Q92673 2214 aa7.82□□□□□ -1.16
USP3-207ENST00000558218 IGKV1D-8A0A087WSZ0 117 aa7.82□□□□□ -1.16
USP3-207ENST00000558218 OVOL1O14753 267 aa7.82□□□□□ -1.16
USP3-207ENST00000558218 CREBL2O60519 120 aaPredicted RBP7.82□□□□□ -1.16
USP3-207ENST00000558218 CD36P16671 472 aa7.82□□□□□ -1.16
USP3-207ENST00000558218 GNG2P59768 71 aa7.82□□□□□ -1.16
USP3-207ENST00000558218 UBE2KP61086 200 aa7.82□□□□□ -1.16
USP3-207ENST00000558218 GNB1P62873 340 aa7.82□□□□□ -1.16
USP3-207ENST00000558218 MSMO1Q15800 293 aa7.82□□□□□ -1.16
USP3-207ENST00000558218 VMA21Q3ZAQ7 101 aa7.82□□□□□ -1.16
USP3-207ENST00000558218 ASPHD1Q5U4P2 390 aa7.82□□□□□ -1.16
USP3-207ENST00000558218 BVESQ8NE79 360 aa7.82□□□□□ -1.16
USP3-207ENST00000558218 DCUN1D4Q92564 292 aa7.82□□□□□ -1.16
USP3-207ENST00000558218 HARBI1Q96MB7 349 aa7.82□□□□□ -1.16
USP3-207ENST00000558218 CLCC1Q96S66 551 aa7.82□□□□□ -1.16
USP3-207ENST00000558218 HSD17B10Q99714 261 aaKnown RBP7.82□□□□□ -1.16
USP3-207ENST00000558218 RANGRFQ9HD47 186 aaPredicted RBP7.82□□□□□ -1.16
USP3-207ENST00000558218 DIABLOQ9NR28 239 aa7.82□□□□□ -1.16
USP3-207ENST00000558218 RHBDL2Q9NX52 303 aa7.82□□□□□ -1.16
USP3-207ENST00000558218 ANXA10Q9UJ72 324 aa7.82□□□□□ -1.16
USP3-207ENST00000558218 PRELID3BQ9Y3B1 194 aa7.82□□□□□ -1.16
USP3-207ENST00000558218 LSM4Q9Y4Z0 139 aaKnown RBP7.82□□□□□ -1.16
USP3-207ENST00000558218 SRRM4A7MD48 611 aaKnown RBP7.81□□□□□ -1.16
USP3-207ENST00000558218 TRGV3P03979 118 aa7.81□□□□□ -1.16
USP3-207ENST00000558218 ZP3P21754 424 aa7.81□□□□□ -1.16
USP3-207ENST00000558218 AADACP22760 399 aa7.81□□□□□ -1.16
USP3-207ENST00000558218 TPPP2P59282 170 aa7.81□□□□□ -1.16
USP3-207ENST00000558218 CD69Q07108 199 aa7.81□□□□□ -1.16
USP3-207ENST00000558218 VAX1Q5SQQ9 334 aa7.81□□□□□ -1.16
USP3-207ENST00000558218 IDNKQ5T6J7 187 aa7.81□□□□□ -1.16
USP3-207ENST00000558218 OVCH2Q7RTZ1 564 aa7.81□□□□□ -1.16
USP3-207ENST00000558218 POC5Q8NA72 575 aa7.81□□□□□ -1.16
USP3-207ENST00000558218 LGALS14Q8TCE9 139 aa7.81□□□□□ -1.16
USP3-207ENST00000558218 MAFIPQ8WZ33 124 aa7.81□□□□□ -1.16
USP3-207ENST00000558218 USMG5Q96IX5 58 aa7.81□□□□□ -1.16
USP3-207ENST00000558218 AIFM2Q9BRQ8 373 aa7.81□□□□□ -1.16
USP3-207ENST00000558218 FAM103A1Q9BTL3 118 aaKnown RBP7.81□□□□□ -1.16
USP3-207ENST00000558218 VCX3AQ9NNX9 186 aa7.81□□□□□ -1.16
USP3-207ENST00000558218 SPATA2Q9UM82 520 aa7.81□□□□□ -1.16
USP3-207ENST00000558218 ZNF256Q9Y2P7 627 aaPredicted RBP7.81□□□□□ -1.16
USP3-207ENST00000558218 MRPS7Q9Y2R9 242 aaKnown RBP7.81□□□□□ -1.16
USP3-207ENST00000558218 RBMX2Q9Y388 322 aaKnown RBP7.81□□□□□ -1.16
USP3-207ENST00000558218 A3GALT2U3KPV4 340 aa7.81□□□□□ -1.16
USP3-207ENST00000558218 TRAV18A0A075B6X5 111 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 A0A087WXM4 84 aa7.8□□□□□ -1.16
USP3-207ENST00000558218 LOC100506127A0A0U1RQW1 187 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms