RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 UPK1BO75841 260 aa8.36□□□□□ -1.07
LRRC28-204ENST00000558172 LINC00205P59089 165 aa8.36□□□□□ -1.07
LRRC28-204ENST00000558172 RPS16P62249 146 aaKnown RBP8.36□□□□□ -1.07
LRRC28-204ENST00000558172 NPBQ8NG41 125 aa8.36□□□□□ -1.07
LRRC28-204ENST00000558172 OR4S2Q8NH73 311 aa8.36□□□□□ -1.07
LRRC28-204ENST00000558172 OSR1Q8TAX0 266 aaPredicted RBP8.36□□□□□ -1.07
LRRC28-204ENST00000558172 MRGPRFQ96AM1 343 aa8.36□□□□□ -1.07
LRRC28-204ENST00000558172 TSNAXQ99598 290 aaKnown RBP8.36□□□□□ -1.07
LRRC28-204ENST00000558172 AIFM2Q9BRQ8 373 aa8.36□□□□□ -1.07
LRRC28-204ENST00000558172 PRSS22Q9GZN4 317 aa8.36□□□□□ -1.07
LRRC28-204ENST00000558172 SLC2A9Q9NRM0 540 aa8.36□□□□□ -1.07
LRRC28-204ENST00000558172 FAM212BQ9NTI7 297 aaPredicted RBP8.36□□□□□ -1.07
LRRC28-204ENST00000558172 LIN7CQ9NUP9 197 aaKnown RBP8.36□□□□□ -1.07
LRRC28-204ENST00000558172 KIAA1456Q9P272 454 aa8.36□□□□□ -1.07
LRRC28-204ENST00000558172 COPZ2Q9P299 210 aa8.36□□□□□ -1.07
LRRC28-204ENST00000558172 LINC00854A0A1B0GVQ3 168 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 SHOXO15266 292 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 NBR2O15453 112 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 PLA2G10O15496 165 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 LYRM1O43325 122 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 CHST1O43916 411 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 B3GALNT1O75752 331 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 TSPAN9O75954 239 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 NDUFA3O95167 84 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 NDUFA7O95182 113 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 SPDEFO95238 335 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 HPRT1P00492 218 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 IGKV1-16P04430 117 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 RLN1P04808 185 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 HKR1P10072 659 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 F2RP25116 425 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 PIGPP57054 158 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 RBMS2Q15434 407 aaKnown RBP8.35□□□□□ -1.07
LRRC28-204ENST00000558172 MMDQ15546 238 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 PHLDA2Q53GA4 152 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 C11orf88Q6PI97 169 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 TBC1D26Q86UD7 250 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 SPAG16Q8N0X2 631 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 TMEM158Q8WZ71 300 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 TSC22D3Q99576 134 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 RASL11BQ9BPW5 248 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 PLSCR3Q9NRY6 295 aa8.35□□□□□ -1.07
LRRC28-204ENST00000558172 A0A1B0GUS0 222 aa8.34□□□□□ -1.07
LRRC28-204ENST00000558172 MPPED1O15442 326 aa8.34□□□□□ -1.07
LRRC28-204ENST00000558172 CRYZL1O95825 349 aa8.34□□□□□ -1.07
LRRC28-204ENST00000558172 HRASP01112 189 aa8.34□□□□□ -1.07
LRRC28-204ENST00000558172 F2RL1P55085 397 aa8.34□□□□□ -1.07
LRRC28-204ENST00000558172 SRSF2Q01130 221 aaKnown RBP8.34□□□□□ -1.07
LRRC28-204ENST00000558172 FBLN7Q53RD9 439 aa8.34□□□□□ -1.07
LRRC28-204ENST00000558172 MZT2BQ6NZ67 158 aa8.34□□□□□ -1.07
LRRC28-204ENST00000558172 C5orf56Q8N8D9 126 aa8.34□□□□□ -1.07
LRRC28-204ENST00000558172 Q8N9W7 124 aa8.34□□□□□ -1.07
LRRC28-204ENST00000558172 OR4F5Q8NH21 305 aa8.34□□□□□ -1.07
LRRC28-204ENST00000558172 OR51H1Q8NH63 302 aa8.34□□□□□ -1.07
LRRC28-204ENST00000558172 RITA1Q96K30 269 aa8.34□□□□□ -1.07
LRRC28-204ENST00000558172 HARBI1Q96MB7 349 aa8.34□□□□□ -1.07
LRRC28-204ENST00000558172 GPHA2Q96T91 129 aa8.34□□□□□ -1.07
LRRC28-204ENST00000558172 RTBDNQ9BSG5 229 aaPredicted RBP8.34□□□□□ -1.07
LRRC28-204ENST00000558172 C5orf66Q9H5L9 145 aa8.34□□□□□ -1.07
LRRC28-204ENST00000558172 C16orf95Q9H693 158 aa8.34□□□□□ -1.07
LRRC28-204ENST00000558172 PLEKHA2Q9HB19 425 aa8.34□□□□□ -1.07
LRRC28-204ENST00000558172 KCNIP3Q9Y2W7 256 aa8.34□□□□□ -1.07
LRRC28-204ENST00000558172 C3orf85A0A1B0GTC6 90 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 RRHO14718 337 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 NDUFB6O95139 128 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 AMY1AP04745 511 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 RPA2P15927 270 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 PI3P19957 117 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 BRWD1-AS2P59051 145 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 TAS2R31P59538 309 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 DEFA1P59665 94 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 DEFA3P59666 94 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 UBE2KP61086 200 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 BLCAPP62952 87 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 FOXL1Q12952 345 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 ASAH1Q13510 395 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 PSG5Q15238 335 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 C5orf64Q2M2E5 130 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 VMA21Q3ZAQ7 101 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 OR2B11Q5JQS5 317 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 LIN54Q6MZP7 749 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 Q6ZSV7 163 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 SGPP2Q8IWX5 399 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 FAM71E2Q8N5Q1 922 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.33□□□□□ -1.08
LRRC28-204ENST00000558172 TEX45Q8NA69 505 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 OR2T6Q8NHC8 308 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 VSTM2AQ8TAG5 236 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 COMMD9Q9P000 198 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 VSIG4Q9Y279 399 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 COL6A5A8TX70 2615 aa8.33□□□□□ -1.08
LRRC28-204ENST00000558172 TEX13DA0A0J9YY54 714 aaPredicted RBP8.32□□□□□ -1.08
LRRC28-204ENST00000558172 TMEM89A2RUT3 159 aa8.32□□□□□ -1.08
LRRC28-204ENST00000558172 CRYM-AS1A6NIL9 109 aa8.32□□□□□ -1.08
LRRC28-204ENST00000558172 H0Y980 276 aa8.32□□□□□ -1.08
LRRC28-204ENST00000558172 KCNAB3O43448 404 aa8.32□□□□□ -1.08
LRRC28-204ENST00000558172 RAMP3O60896 148 aa8.32□□□□□ -1.08
LRRC28-204ENST00000558172 PEX14O75381 377 aa8.32□□□□□ -1.08
LRRC28-204ENST00000558172 ATG12O94817 140 aa8.32□□□□□ -1.08
LRRC28-204ENST00000558172 IGLV2-23P01705 113 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms